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Spg022789 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022789
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein At2g35280-like
Genome locationscaffold2:9012594..9012994
RNA-Seq ExpressionSpg022789
SyntenySpg022789
Gene Ontology termsNA
InterPro domainsIPR040338 - Putative F-box protein At1g67623-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601105.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2266.29Show/hide
Query:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        SPPPIE LP DLLI+VL KVA  S TDL + KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

KAG7031905.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-2366.29Show/hide
Query:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        SPPPIE LP DLLI+VL KVA SS TDL + KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LY+KGML
Subjt:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

XP_022957262.1 putative F-box protein At1g67623 [Cucurbita moschata]1.1e-2266.29Show/hide
Query:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        SPPPIE LP DLLI+VL KVA  S TDL + KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

XP_022957263.1 F-box protein At2g35280-like [Cucurbita moschata]2.9e-2367.42Show/hide
Query:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        SPPPIE LP DLLI+VL KVA SS TDL + KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

XP_038891683.1 putative F-box protein At1g67623 [Benincasa hispida]2.2e-2365.22Show/hide
Query:  MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        +  SP  I+ LP DLLI+VL KVA SS TDL   KLATKDFLE S +G IFRHVSLG+FSK+LW   PEF S +E  N N NPE+LYRKGML
Subjt:  MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

TrEMBL top hitse value%identityAlignment
A0A6J1GYN4 putative F-box protein At1g676235.3e-2366.29Show/hide
Query:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        SPPPIE LP DLLI+VL KVA  S TDL + KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

A0A6J1GZQ6 F-box protein At2g35280-like1.4e-2367.42Show/hide
Query:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        SPPPIE LP DLLI+VL KVA SS TDL + KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  SPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

A0A6J1H022 putative F-box protein At1g676231.2e-2265.91Show/hide
Query:  PPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        PP IE LP DLLI+VL KVA  S TDL   KLATK+FLEAS  G IF+H SL +F K+LW   PEF SFME  N NGNPE LY+KGML
Subjt:  PPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

A0A6J1JRV1 putative F-box protein At1g676231.5e-2263.04Show/hide
Query:  MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        ++ SPP IE LP DLLI++L KVA SS TDL   KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

A0A6J1JRX4 putative F-box protein At1g676231.5e-2263.04Show/hide
Query:  MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        ++ SPP IE LP DLLI++L KVA SS TDL   KLATK FLEAS    IF+H SL +F K+LW    EF SFME  N NGNPE LYRKGML
Subjt:  MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

SwissProt top hitse value%identityAlignment
Q1PEW8 F-box protein At2g352804.1e-0429.07Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLF
        +E LP+DLL +++ K+   S+ D  N  L+ K+   ++ D ++ + ++L    K    +C + L  M+    N NP+A Y KG+++
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLF

Q9FXC7 Putative F-box protein At1g676233.1e-0429.41Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        ++ LPEDLL+++      SS + + N +L +K F     +  +F  +SL     + W        F+E   ++ NPEAL++KG +
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

Arabidopsis top hitse value%identityAlignment
AT1G67623.1 F-box family protein2.2e-0529.41Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        ++ LPEDLL+++      SS + + N +L +K F     +  +F  +SL     + W        F+E   ++ NPEAL++KG +
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

AT1G74875.1 FUNCTIONS IN: molecular_function unknown1.8e-0732.89Show/hide
Query:  IQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML
        I +++ V +SS ++  N +L +K F   S D  I + +SL     + W+   +F +F +   K+GN EA+YRKG++
Subjt:  IQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGML

AT2G35280.1 F-box family protein2.9e-0529.07Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLF
        +E LP+DLL +++ K+   S+ D  N  L+ K+   ++ D ++ + ++L    K    +C + L  M+    N NP+A Y KG+++
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLF

AT3G30430.1 F-box family protein1.1e-0427.91Show/hide
Query:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLF
        +E LP+DLL +++ K+    + D  N  L+ K+   ++ D ++ + ++L    K    +C + L  M+    N NP+A Y KG+++
Subjt:  IEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTTCCCCACCACCCATTGAATTCCTTCCCGAAGATTTACTAATTCAAGTGCTTGTCAAAGTTGCAACCTCTTCGTCGACTGATTTATTCAACACTAAATTAGC
CACCAAAGATTTTCTCGAAGCATCGATCGATGGCCAGATATTTCGCCACGTGTCGCTCGGAAGCTTCTCGAAAGTTCTATGGAAGACTTGCCCCGAATTCTTGTCGTTCA
TGGAGAATTATAATAAGAATGGGAATCCCGAAGCTTTGTACAGAAAGGGCATGTTGTTTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTTCCCCACCACCCATTGAATTCCTTCCCGAAGATTTACTAATTCAAGTGCTTGTCAAAGTTGCAACCTCTTCGTCGACTGATTTATTCAACACTAAATTAGC
CACCAAAGATTTTCTCGAAGCATCGATCGATGGCCAGATATTTCGCCACGTGTCGCTCGGAAGCTTCTCGAAAGTTCTATGGAAGACTTGCCCCGAATTCTTGTCGTTCA
TGGAGAATTATAATAAGAATGGGAATCCCGAAGCTTTGTACAGAAAGGGCATGTTGTTTGGAGGATGA
Protein sequenceShow/hide protein sequence
MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNTKLATKDFLEASIDGQIFRHVSLGSFSKVLWKTCPEFLSFMENYNKNGNPEALYRKGMLFGG