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Spg022797 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022797
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCW-type domain-containing protein
Genome locationscaffold2:2552975..2557518
RNA-Seq ExpressionSpg022797
SyntenySpg022797
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011124 - Zinc finger, CW-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587732.1 tRNA-specific adenosine deaminase TAD2, partial [Cucurbita argyrosperma subsp. sororia]7.9e-6683.12Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDET+SRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

KAG6588044.1 hypothetical protein SDJN03_16609, partial [Cucurbita argyrosperma subsp. sororia]7.9e-6683.12Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDET+SRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

XP_022933897.1 uncharacterized protein LOC111441172 isoform X1 [Cucurbita moschata]1.0e-6583.12Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDET+SRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

XP_022974204.1 uncharacterized protein LOC111472812 isoform X1 [Cucurbita maxima]2.1e-6683.77Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDETRSRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

XP_022974206.1 uncharacterized protein LOC111472812 isoform X2 [Cucurbita maxima]2.1e-6683.77Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDETRSRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

TrEMBL top hitse value%identityAlignment
A0A0A0LWX9 CW-type domain-containing protein6.1e-6480.13Show/hide
Query:  KVFDTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVL
        ++ DTDAI EPLEMD SESF +HEQSTNKPCRLS IGNWLQCQQVIDGVGG NG ICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQV 
Subjt:  KVFDTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVL

Query:  KQLKYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHR
        KQLKYIEM                 LRPRLASKRRKLDE +SRSDVQNLTEDTEH+
Subjt:  KQLKYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHR

A0A6J1F145 uncharacterized protein LOC111441172 isoform X15.0e-6683.12Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDET+SRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

A0A6J1F652 uncharacterized protein LOC111441172 isoform X25.0e-6683.12Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDET+SRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

A0A6J1IAQ4 uncharacterized protein LOC111472812 isoform X21.0e-6683.77Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDETRSRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

A0A6J1IGX7 uncharacterized protein LOC111472812 isoform X11.0e-6683.77Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DTDA  EPLEMDPS SFL+HEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDP HADCAVPQELETGQVLKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT
        KYIEM                 LRPRLASKRRKLDETRSRSDVQNL E+TEH+T
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein2.6e-3049.66Show/hide
Query:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL
        DT  + EPLE+  SE     +++ N   + SA+ NWLQC++        NGVICGKWRRAP  EVQT DWECFC   WDP+ ADCAVPQELET ++LKQL
Subjt:  DTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQL

Query:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKL-DETRSRSDVQ
        KYI+M                 LRPR  +K+RKL  + RSRS ++
Subjt:  KYIEMLSKVAPVEQDQDRNYKKLRPRLASKRRKL-DETRSRSDVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTGCAGAAGGTCTTTGATACTGATGCCATCGTTGAGCCACTGGAAATGGATCCTTCAGAATCTTTTCTTGTGCATGAGCAGAGTACCAATAAACCTTGTAGATT
GAGCGCTATTGGAAATTGGCTTCAATGTCAACAAGTTATAGATGGAGTGGGTGGTGTTAATGGAGTCATATGTGGCAAGTGGCGCAGGGCTCCTCTTTTTGAAGTCCAAA
CTGATGACTGGGAATGCTTCTGCTCCATCCTCTGGGATCCAACTCATGCTGATTGTGCTGTACCTCAGGAATTGGAGACGGGTCAAGTTTTGAAGCAGTTGAAGTACATT
GAGATGTTATCGAAAGTGGCTCCAGTTGAACAAGACCAAGATCGTAATTACAAAAAGTTGAGGCCTCGGTTAGCTTCCAAAAGACGGAAATTGGATGAGACCAGGAGCAG
AAGTGATGTGCAGAACCTTACAGAAGATACAGAACACAGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTGCAGAAGGTCTTTGATACTGATGCCATCGTTGAGCCACTGGAAATGGATCCTTCAGAATCTTTTCTTGTGCATGAGCAGAGTACCAATAAACCTTGTAGATT
GAGCGCTATTGGAAATTGGCTTCAATGTCAACAAGTTATAGATGGAGTGGGTGGTGTTAATGGAGTCATATGTGGCAAGTGGCGCAGGGCTCCTCTTTTTGAAGTCCAAA
CTGATGACTGGGAATGCTTCTGCTCCATCCTCTGGGATCCAACTCATGCTGATTGTGCTGTACCTCAGGAATTGGAGACGGGTCAAGTTTTGAAGCAGTTGAAGTACATT
GAGATGTTATCGAAAGTGGCTCCAGTTGAACAAGACCAAGATCGTAATTACAAAAAGTTGAGGCCTCGGTTAGCTTCCAAAAGACGGAAATTGGATGAGACCAGGAGCAG
AAGTGATGTGCAGAACCTTACAGAAGATACAGAACACAGAACTTGA
Protein sequenceShow/hide protein sequence
MQLQKVFDTDAIVEPLEMDPSESFLVHEQSTNKPCRLSAIGNWLQCQQVIDGVGGVNGVICGKWRRAPLFEVQTDDWECFCSILWDPTHADCAVPQELETGQVLKQLKYI
EMLSKVAPVEQDQDRNYKKLRPRLASKRRKLDETRSRSDVQNLTEDTEHRT