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Spg022801 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022801
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationscaffold2:4929939..4930214
RNA-Seq ExpressionSpg022801
SyntenySpg022801
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]8.3e-2875.27Show/hide
Query:  LFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVINTHKADSVKK-----MNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS
        + + KAL+F  +LAG S LC+QPQTASGL+TIDLALKWVAFKSP+ NTH  DSVKK     M+LAPSPAM FDPNQSNKRGVKKGSDPIHNRS
Subjt:  LFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVINTHKADSVKK-----MNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2872.92Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVINTHKAD------SVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR
        MG LF RK L F+F+LAGF    LQPQTASGL+TID+ALKWVAFKSP I+THKAD      ++K MN+APSPAM FDPNQSNKR VKKGSDPIHNR
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVINTHKAD------SVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]2.5e-2474.75Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCL---QPQ-TASGLSTIDLALKWVAFKSP-VINTHKADSVKKMNL---APSPAMKFDPNQSNKRGVKKGSDPIHNRS
        MGSLF+RK L FVFV+A F  LC+   QPQ TA+GLSTID ALKWVAFKS   INTHKADS  + NL   APSPAM FDPNQSNKRGVKKGSDPIHNRS
Subjt:  MGSLFNRKALIFVFVLAGFSTLCL---QPQ-TASGLSTIDLALKWVAFKSP-VINTHKADSVKKMNL---APSPAMKFDPNQSNKRGVKKGSDPIHNRS

PON93588.1 CLAVATA3/ESR-RELATED [Trema orientale]8.3e-1249.48Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVI-NTH------KADSVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR
        MG L NR AL+ + +  GF  L L P+  S L + DLALKW   K P + N H        D  +K++LAP+P++ FDPNQSNKR V++GSDPIHNR
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVI-NTH------KADSVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR

PQQ10203.1 hypothetical protein Pyn_16404 [Prunus yedoensis var. nudiflora]8.3e-1251.02Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS
        MG L  R A++FV +  GF  L LQP+  SGL ++DLAL+W     S + + H  ++V       K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein1.2e-2474.75Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCL---QPQ-TASGLSTIDLALKWVAFKSP-VINTHKADSVKKMNL---APSPAMKFDPNQSNKRGVKKGSDPIHNRS
        MGSLF+RK L FVFV+A F  LC+   QPQ TA+GLSTID ALKWVAFKS   INTHKADS  + NL   APSPAM FDPNQSNKRGVKKGSDPIHNRS
Subjt:  MGSLFNRKALIFVFVLAGFSTLCL---QPQ-TASGLSTIDLALKWVAFKSP-VINTHKADSVKKMNL---APSPAMKFDPNQSNKRGVKKGSDPIHNRS

A0A2P5F704 CLAVATA3/ESR-RELATED4.0e-1249.48Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVI-NTH------KADSVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR
        MG L NR AL+ + +  GF  L L P+  S L + DLALKW   K P + N H        D  +K++LAP+P++ FDPNQSNKR V++GSDPIHNR
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVI-NTH------KADSVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR

A0A314XM06 Uncharacterized protein2.0e-1150.52Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR
        MG L  R A++FV +  GF  L LQP+  SGL ++DLAL+W     S + + H   +V       K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein4.0e-1251.02Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS
        MG L  R A++FV +  GF  L LQP+  SGL ++DLAL+W     S + + H  ++V       K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS

M5WYZ5 Uncharacterized protein2.0e-1150.52Show/hide
Query:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR
        MG L  R A++FV +  GF  L LQP+  SGL ++DLAL+W     S + + H   +V       K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKW-VAFKSPVINTHKADSV------KKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCTTGTTTAACAGGAAAGCTTTGATCTTTGTCTTTGTTCTGGCTGGTTTTTCCACCTTGTGTCTTCAACCTCAAACAGCTTCTGGGCTCAGCACCATTGATCT
TGCTCTCAAATGGGTCGCCTTCAAATCCCCAGTTATCAACACCCACAAGGCTGATTCTGTGAAAAAGATGAACTTGGCTCCTTCACCAGCCATGAAGTTTGACCCGAATC
AATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCTTGTTTAACAGGAAAGCTTTGATCTTTGTCTTTGTTCTGGCTGGTTTTTCCACCTTGTGTCTTCAACCTCAAACAGCTTCTGGGCTCAGCACCATTGATCT
TGCTCTCAAATGGGTCGCCTTCAAATCCCCAGTTATCAACACCCACAAGGCTGATTCTGTGAAAAAGATGAACTTGGCTCCTTCACCAGCCATGAAGTTTGACCCGAATC
AATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGAAGCTAG
Protein sequenceShow/hide protein sequence
MGSLFNRKALIFVFVLAGFSTLCLQPQTASGLSTIDLALKWVAFKSPVINTHKADSVKKMNLAPSPAMKFDPNQSNKRGVKKGSDPIHNRS