; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022852 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022852
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold2:12513995..12515330
RNA-Seq ExpressionSpg022852
SyntenySpg022852
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN66129.1 hypothetical protein VITISV_003261 [Vitis vinifera]6.3e-0825.35Show/hide
Query:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV
        +CY  G I+ G NG+ Y   P   +  +  I ++E    LC+ +SID T   L +IFRY    +IG  G+  Y+ + ++ + D+R M    + +P  + +
Subjt:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV

Query:  ELFI-----SQLNNNIPTLDRE-------------------NIDSMVVTNDDVGTE---------------------SDNDSTDEASDDSVEE-------
        E+++        +   P+ D+E                    +D  +  ND++G                       ++ND  +   +D + E       
Subjt:  ELFI-----SQLNNNIPTLDRE-------------------NIDSMVVTNDDVGTE---------------------SDNDSTDEASDDSVEE-------

Query:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK
                 G + +PS  F +L+  AI+++      P TG+  E+   + L KG+ ++SK DL  AVK Y+I R+QH  V ESK
Subjt:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK

CAN78664.1 hypothetical protein VITISV_019818 [Vitis vinifera]4.6e-1128.08Show/hide
Query:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV
        +CY  G I+ G NG+ Y   P   +  +  I ++E    LC+ +SID T   L +IFRY    +IG  G+  Y+ + ++ + D+R M    + +P  + +
Subjt:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV

Query:  ELFI-----SQLNNNIPTLDRE--------------------NIDSMVVTNDDV-GTESDNDSTDEASDDSVEEAPQMY------GVHEIPS-FFTELDM
        E+++        +   P+ D+E                     +D  +  ND++ G E  + ++DE ++   ++ P         G H +PS  F +L+ 
Subjt:  ELFI-----SQLNNNIPTLDRE--------------------NIDSMVVTNDDV-GTESDNDSTDEASDDSVEEAPQMY------GVHEIPS-FFTELDM

Query:  RAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK
         AI+S+      P TG+  E+   + L KG+ ++SK DL  AVK Y+I R+QH  V ES+
Subjt:  RAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK

RVW83159.1 hypothetical protein CK203_044939 [Vitis vinifera]1.5e-0926.76Show/hide
Query:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV
        +CY  G I+ G NG+ Y   P   +  +  I ++E    LC+ +SID T   L VIFRY    +IG  G+  Y+ + ++ + D+R M    + +P  + +
Subjt:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV

Query:  ELF------------------------------------ISQLNNNIPTLDRENIDSMVVTND---------DVGTESDNDSTDEASDDSVEE-------
        E++                                    I ++N N+   D    +  VVT           D+   ++ND  +   +D + E       
Subjt:  ELF------------------------------------ISQLNNNIPTLDRENIDSMVVTND---------DVGTESDNDSTDEASDDSVEE-------

Query:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK
                 G H +PS  F EL+  AI+S+      P TG+  E+   + L KG+ ++SK DL  AVK Y+I R+QH  V ES+
Subjt:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK

TYK18693.1 hypothetical protein E5676_scaffold481G00410 [Cucumis melo var. makuwa]1.5e-0931.29Show/hide
Query:  MTHASSLPSRVELFISQ--LNNNIPTLDREN------------IDSMVVTNDDVGTESDNDSTDEASDDSVEEAPQMYGVHEIPSFFTELDMRAIDSLPN
        M++A  LP  VEL+ISQ  L+++ P ++  N             D  + TN +V    D+DS      D  +   +++GVH++P  F  +D+  ++S  +
Subjt:  MTHASSLPSRVELFISQ--LNNNIPTLDREN------------IDSMVVTNDDVGTESDNDSTDEASDDSVEEAPQMYGVHEIPSFFTELDMRAIDSLPN

Query:  TGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESKK
          ++ E  G + L+  M++ SK +L N VK Y+I++HQ F+V++ KK
Subjt:  TGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESKK

XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]3.6e-4044.49Show/hide
Query:  MEDVGFICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGGLEVIFRYGTIGFEGSTYYVPISLRSEVDLRFMMTHASSLPSRV
        M+ V F+CYM GNIV+G +GIEYD  PS+ IN  R   F   I G  +  SI+    +EVIFRYG+     ST+++PISLRS++D++FMM++A   P+RV
Subjt:  MEDVGFICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGGLEVIFRYGTIGFEGSTYYVPISLRSEVDLRFMMTHASSLPSRV

Query:  ELFISQLNNNIPTLDRENIDSMVVTNDDVGTE------SDNDSTDEASDDSV---EEAPQMYGVHEIPSFFTELDMRAIDSLP-NTGIEREARGDDSLVK
        EL+ISQ +   PT  RE ++++ + +  V  E      + ND   +  DD +   + + Q YGVHE+P  FTE+D+  + + P +T  E    G DSL+K
Subjt:  ELFISQLNNNIPTLDRENIDSMVVTNDDVGTE------SDNDSTDEASDDSV---EEAPQMYGVHEIPSFFTELDMRAIDSLP-NTGIEREARGDDSLVK

Query:  GMIYKSKNDLMNAVKSYSIIRHQHFDVVESKKKRRD
        GMI+ SK DL N V++YSIIRHQ+F+V+E KK   D
Subjt:  GMIYKSKNDLMNAVKSYSIIRHQHFDVVESKKKRRD

TrEMBL top hitse value%identityAlignment
A0A438HFK5 SWIM-type domain-containing protein7.2e-1026.76Show/hide
Query:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV
        +CY  G I+ G NG+ Y   P   +  +  I ++E    LC+ +SID T   L VIFRY    +IG  G+  Y+ + ++ + D+R M    + +P  + +
Subjt:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV

Query:  ELF------------------------------------ISQLNNNIPTLDRENIDSMVVTND---------DVGTESDNDSTDEASDDSVEE-------
        E++                                    I ++N N+   D    +  VVT           D+   ++ND  +   +D + E       
Subjt:  ELF------------------------------------ISQLNNNIPTLDRENIDSMVVTND---------DVGTESDNDSTDEASDDSVEE-------

Query:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK
                 G H +PS  F EL+  AI+S+      P TG+  E+   + L KG+ ++SK DL  AVK Y+I R+QH  V ES+
Subjt:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK

A0A5D3BS46 DBD_Tnp_Mut domain-containing protein6.8e-0853.45Show/hide
Query:  DMRAIDSLPNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESKKK
        D  +ID +P  G+  E    ++L+KGM++KSK DL N VKSYSI+ HQH D VES KK
Subjt:  DMRAIDSLPNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESKKK

A0A5D3D569 Uncharacterized protein7.2e-1031.29Show/hide
Query:  MTHASSLPSRVELFISQ--LNNNIPTLDREN------------IDSMVVTNDDVGTESDNDSTDEASDDSVEEAPQMYGVHEIPSFFTELDMRAIDSLPN
        M++A  LP  VEL+ISQ  L+++ P ++  N             D  + TN +V    D+DS      D  +   +++GVH++P  F  +D+  ++S  +
Subjt:  MTHASSLPSRVELFISQ--LNNNIPTLDREN------------IDSMVVTNDDVGTESDNDSTDEASDDSVEEAPQMYGVHEIPSFFTELDMRAIDSLPN

Query:  TGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESKK
          ++ E  G + L+  M++ SK +L N VK Y+I++HQ F+V++ KK
Subjt:  TGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESKK

A5B5G3 SWIM-type domain-containing protein2.2e-1128.08Show/hide
Query:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV
        +CY  G I+ G NG+ Y   P   +  +  I ++E    LC+ +SID T   L +IFRY    +IG  G+  Y+ + ++ + D+R M    + +P  + +
Subjt:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV

Query:  ELFI-----SQLNNNIPTLDRE--------------------NIDSMVVTNDDV-GTESDNDSTDEASDDSVEEAPQMY------GVHEIPS-FFTELDM
        E+++        +   P+ D+E                     +D  +  ND++ G E  + ++DE ++   ++ P         G H +PS  F +L+ 
Subjt:  ELFI-----SQLNNNIPTLDRE--------------------NIDSMVVTNDDV-GTESDNDSTDEASDDSVEEAPQMY------GVHEIPS-FFTELDM

Query:  RAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK
         AI+S+      P TG+  E+   + L KG+ ++SK DL  AVK Y+I R+QH  V ES+
Subjt:  RAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK

A5BXI2 SWIM-type domain-containing protein3.0e-0825.35Show/hide
Query:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV
        +CY  G I+ G NG+ Y   P   +  +  I ++E    LC+ +SID T   L +IFRY    +IG  G+  Y+ + ++ + D+R M    + +P  + +
Subjt:  ICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGG-LEVIFRYG---TIGFEGSTYYVPISLRSEVDLRFMMTHASSLP--SRV

Query:  ELFI-----SQLNNNIPTLDRE-------------------NIDSMVVTNDDVGTE---------------------SDNDSTDEASDDSVEE-------
        E+++        +   P+ D+E                    +D  +  ND++G                       ++ND  +   +D + E       
Subjt:  ELFI-----SQLNNNIPTLDRE-------------------NIDSMVVTNDDVGTE---------------------SDNDSTDEASDDSVEE-------

Query:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK
                 G + +PS  F +L+  AI+++      P TG+  E+   + L KG+ ++SK DL  AVK Y+I R+QH  V ESK
Subjt:  ----APQMYGVHEIPS-FFTELDMRAIDSL------PNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVESK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGTTGGATTTATATGCTACATGGGTGGGAATATAGTCCACGGTCTGAACGGTATAGAGTACGATGTCGGACCATCTGTTATGATCAATTTTGATCGGGATAT
TGCATTCGAAGAATTTATTCAAGGGTTATGCAATGGCCTATCAATTGATATAACTGGAGGGTTGGAGGTCATATTTAGATACGGAACTATTGGATTTGAAGGGTCTACTT
ATTATGTTCCGATATCATTACGAAGCGAGGTTGATCTTAGATTTATGATGACCCATGCTTCTTCTCTTCCCTCTAGAGTAGAGCTTTTTATCTCTCAACTGAACAACAAC
ATTCCTACATTGGACAGAGAGAACATAGACTCTATGGTTGTGACGAACGACGATGTTGGAACGGAGTCTGATAATGATAGCACAGATGAAGCATCTGATGATAGTGTAGA
GGAAGCGCCACAGATGTACGGAGTGCATGAAATCCCTTCCTTTTTCACAGAGTTGGACATGAGAGCTATCGATTCCCTTCCTAACACGGGGATTGAAAGAGAAGCAAGAG
GAGATGATTCATTGGTGAAAGGGATGATATATAAGTCGAAGAACGACTTAATGAACGCCGTTAAAAGCTACTCTATCATTCGGCATCAGCACTTTGACGTCGTTGAGTCG
AAGAAAAAGCGTCGAGACGCTATGCAAGGCAGTGTCGCGACGCTACCCATTTCTTGGGCAACAAGACGCGTGCGTTGCAGCGTCGCGATGCTGTGCAATGTAGCGTCGCG
ACGCTACCCTCATTCCGGGCCTATAAAAAGGCACCCTTGGGTGCCTCATGGACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCT
CTCTCAAGGCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGTTGGATTTATATGCTACATGGGTGGGAATATAGTCCACGGTCTGAACGGTATAGAGTACGATGTCGGACCATCTGTTATGATCAATTTTGATCGGGATAT
TGCATTCGAAGAATTTATTCAAGGGTTATGCAATGGCCTATCAATTGATATAACTGGAGGGTTGGAGGTCATATTTAGATACGGAACTATTGGATTTGAAGGGTCTACTT
ATTATGTTCCGATATCATTACGAAGCGAGGTTGATCTTAGATTTATGATGACCCATGCTTCTTCTCTTCCCTCTAGAGTAGAGCTTTTTATCTCTCAACTGAACAACAAC
ATTCCTACATTGGACAGAGAGAACATAGACTCTATGGTTGTGACGAACGACGATGTTGGAACGGAGTCTGATAATGATAGCACAGATGAAGCATCTGATGATAGTGTAGA
GGAAGCGCCACAGATGTACGGAGTGCATGAAATCCCTTCCTTTTTCACAGAGTTGGACATGAGAGCTATCGATTCCCTTCCTAACACGGGGATTGAAAGAGAAGCAAGAG
GAGATGATTCATTGGTGAAAGGGATGATATATAAGTCGAAGAACGACTTAATGAACGCCGTTAAAAGCTACTCTATCATTCGGCATCAGCACTTTGACGTCGTTGAGTCG
AAGAAAAAGCGTCGAGACGCTATGCAAGGCAGTGTCGCGACGCTACCCATTTCTTGGGCAACAAGACGCGTGCGTTGCAGCGTCGCGATGCTGTGCAATGTAGCGTCGCG
ACGCTACCCTCATTCCGGGCCTATAAAAAGGCACCCTTGGGTGCCTCATGGACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCT
CTCTCAAGGCTTTCTAG
Protein sequenceShow/hide protein sequence
MEDVGFICYMGGNIVHGLNGIEYDVGPSVMINFDRDIAFEEFIQGLCNGLSIDITGGLEVIFRYGTIGFEGSTYYVPISLRSEVDLRFMMTHASSLPSRVELFISQLNNN
IPTLDRENIDSMVVTNDDVGTESDNDSTDEASDDSVEEAPQMYGVHEIPSFFTELDMRAIDSLPNTGIEREARGDDSLVKGMIYKSKNDLMNAVKSYSIIRHQHFDVVES
KKKRRDAMQGSVATLPISWATRRVRCSVAMLCNVASRRYPHSGPIKRHPWVPHGPSINSFFNPFFPSFGSFGASLKAF