Spg022868 (gene) of Sponge gourd (cylindrica) v1 genome
| Gene ID | Spg022868 |
|---|---|
| Organism | Luffa cylindrica (Sponge gourd (cylindrica) v1) |
| Description | DNA-directed RNA polymerase subunit beta |
| Genome location | scaffold173:24616..38049 |
| RNA-Seq Expression | Spg022868 |
| Synteny | Spg022868 |
| Gene Ontology terms | GO:0006351 - transcription, DNA-templated (biological process) GO:0006412 - translation (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0032559 - adenyl ribonucleotide binding (molecular function) GO:0032549 - ribonucleoside binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) |
| InterPro domains | IPR020537 - ATP synthase, F0 complex, subunit C, DCCD-binding site IPR037033 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IPR018130 - Ribosomal protein S2, conserved site IPR015712 - DNA-directed RNA polymerase, subunit 2 IPR014724 - RNA polymerase Rpb2, OB-fold IPR012756 - DNA-directed RNA polymerase, subunit beta'' IPR010243 - DNA-directed RNA polymerase beta subunit, bacterial-type IPR007645 - RNA polymerase Rpb2, domain 3 IPR007644 - RNA polymerase, beta subunit, protrusion IPR007642 - RNA polymerase Rpb2, domain 2 IPR007641 - RNA polymerase Rpb2, domain 7 IPR023011 - ATP synthase, F0 complex, subunit A, active site IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily IPR035908 - ATP synthase, F0 complex, subunit A superfamily IPR035921 - F/V-ATP synthase subunit C superfamily IPR007080 - RNA polymerase Rpb1, domain 1 IPR037034 - RNA polymerase Rpb2, domain 2 superfamily IPR038120 - RNA polymerase Rpb1, funnel domain superfamily IPR038662 - F1F0 ATP synthase subunit C superfamily IPR042102 - RNA polymerase Rpb1, domain 3 superfamily IPR042107 - DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily IPR007120 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain IPR000454 - ATP synthase, F0 complex, subunit C IPR000568 - ATP synthase, F0 complex, subunit A IPR000722 - RNA polymerase, alpha subunit IPR001865 - Ribosomal protein S2 IPR002379 - V-ATPase proteolipid subunit C-like domain IPR005706 - Ribosomal protein S2, bacteria/mitochondria/plastid IPR005953 - ATP synthase, F0 complex, subunit C, bacterial/chloroplast IPR006592 - RNA polymerase, N-terminal IPR007066 - RNA polymerase Rpb1, domain 3 IPR007081 - RNA polymerase Rpb1, domain 5 IPR007083 - RNA polymerase Rpb1, domain 4 IPR007121 - RNA polymerase, beta subunit, conserved site |
| Homology | Show/hide homology | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Sequences | Show/hide sequences | ||||||||||||||||
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