CuGenDBv2

Gene ID	Spg022891
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Photosystem II D2 protein
Genome location	scaffold94:28488..30707
RNA-Seq Expression	Spg022891
Synteny	Spg022891
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000484 - Photosynthetic reaction centre, L/M IPR036854 - Photosystem II protein D1/D2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6735382.1 hypothetical protein POTOM_062004 [Populus tomentosa]

4.3e-106

99.48

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        S PIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

KAG6736875.1 hypothetical protein POTOM_060217 [Populus tomentosa]

4.3e-106

99.48

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        S PIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

PPR94016.1 hypothetical protein GOBAR_AA26651 [Gossypium barbadense]

6.5e-94

76.99

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSL HSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL----------------------------------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAE
        SGPIAVFVSVFLIYPL                                                    VTGLWMSALGVVGLALNLRAYDFVSQEIRAAE
Subjt:  SGPIAVFVSVFLIYPL----------------------------------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAE

Query:  DPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
        DPE ETFYTKNILLNEGIRAWMAAQDQPHENLIFPEE L
Subjt:  DPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

TYG57475.1 hypothetical protein ES288_D08G144500v1 [Gossypium darwinii]

1.3e-105

98.96

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSL HSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPE ETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

YP_009253152.1 photosystem II protein D2 [Iochroma cyaneum]

5.8e-95

67.96

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
               VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  -------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

TrEMBL top hits

e value

%identity

Alignment

A0A160EEQ5 Photosystem II D2 protein

2.8e-95

67.96

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
               VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  -------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

A0A2P5WSD6 Uncharacterized protein

3.1e-94

76.99

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSL HSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL----------------------------------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAE
        SGPIAVFVSVFLIYPL                                                    VTGLWMSALGVVGLALNLRAYDFVSQEIRAAE
Subjt:  SGPIAVFVSVFLIYPL----------------------------------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAE

Query:  DPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
        DPE ETFYTKNILLNEGIRAWMAAQDQPHENLIFPEE L
Subjt:  DPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

A0A5D2BMT3 Uncharacterized protein

6.1e-106

98.96

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSL HSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPE ETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  SGPIAVFVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

A0A650DNH4 Photosystem II D2 protein

5.9e-93

63.49

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  ---------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPR
                                   VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPR
Subjt:  ---------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPR

Query:  GNAL
        GNAL
Subjt:  GNAL

A0A6M8TSG0 Photosystem II D2 protein

4.5e-93

63.7

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  --------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRG
                                  VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRG
Subjt:  --------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRG

Query:  NAL
        NAL
Subjt:  NAL

SwissProt top hits

e value

%identity

Alignment

B1A930 Photosystem II D2 protein

2.7e-95

63.07

Show/hide

Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
                                     VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
Subjt:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

Query:  PRGNAL
        PRGNAL
Subjt:  PRGNAL

P69685 Photosystem II D2 protein

2.7e-95

63.07

Show/hide

Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
                                     VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
Subjt:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

Query:  PRGNAL
        PRGNAL
Subjt:  PRGNAL

Q3V539 Photosystem II D2 protein

2.7e-95

63.07

Show/hide

Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
                                     VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
Subjt:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

Query:  PRGNAL
        PRGNAL
Subjt:  PRGNAL

Q4FFP4 Photosystem II D2 protein

2.7e-95

63.07

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
                                     VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
Subjt:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

Query:  PRGNAL
        PRGNAL
Subjt:  PRGNAL

Q8S8X8 Photosystem II D2 protein

2.7e-95

63.07

Show/hide

Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
                                     VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
Subjt:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

Query:  PRGNAL
        PRGNAL
Subjt:  PRGNAL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00020.1 photosystem II reaction center protein A

5.8e-08

28.7

Show/hide

Query:  LASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPL
        ++ S L G N ++ A+   + ++      +W          W   GG +  + LH   G+  +M R++EL+  + +RP+ A+A+S P+A   +VFLIYP+
Subjt:  LASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPL

Query:  VTGLWMSA--LGVVG
          G +     LG+ G
Subjt:  VTGLWMSA--LGVVG

ATCG00270.1 photosystem II reaction center protein D

3.7e-95

62.42

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Query:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF
        GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGAF LIGFMLRQFELARSVQLRPYNAIAF
Subjt:  GWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAF

Query:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------
        SGPIAVFVSVFLIYPL                                                                                    
Subjt:  SGPIAVFVSVFLIYPL------------------------------------------------------------------------------------

Query:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
                                     VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL
Subjt:  -----------------------------VTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVL

Query:  PRGNAL
        PRGNAL
Subjt:  PRGNAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAAGGCGAGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTC
TACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTC
TCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCCGTTCAATTGCGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTT
TTTGTTTCTGTATTCCTGATTTATCCACTAGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGA
AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC
TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

mRNA sequence

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Protein sequence

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MVRRGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAV
FVSVFLIYPLVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Spg022891 (gene) of Sponge gourd (cylindrica) v1 genome