; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022929 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022929
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTMV resistance protein N
Genome locationscaffold5:13990232..13991197
RNA-Seq ExpressionSpg022929
SyntenySpg022929
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33763.1 melon resistance-like protein [Cucumis melo subsp. melo]9.0e-4152.24Show/hide
Query:  CSKLDRFP---QRCSLNFLQESLCSKLTILDLKDCNVSN------ADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPT
        C  L+  P   +  SL+ L  + C KL  L   D N+ +       DFL+ LSN  T+L ELNLSGNKF  LPSLQNF+SLR L+L NCKFLRN+  +P 
Subjt:  CSKLDRFP---QRCSLNFLQESLCSKLTILDLKDCNVSN------ADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPT

Query:  HCLEIVDASGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYV
        HCL  VDASGCE  VISPDYIADI+FR QDL L +  RE ++  S+IP + NNQTTE   SFS + N+     AL  CVVF+VD DSCDA+  I   + +
Subjt:  HCLEIVDASGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYV

Query:  D
        D
Subjt:  D

KGN65609.2 hypothetical protein Csa_019785 [Cucumis sativus]1.2e-5661.42Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD  P   SLNF Q SLCS LTILDL++CN+SN+DFL+ LSN  T+L ELNLSGNKF CLPSL+NFTSLR L+L NCKFLRN+  +P HCL+ +DA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL
        SGCE LVISPDYIAD++FR QDL L +  RE ++  SEIP + NNQTTE  ISFS +HN+     AL  CVVF+VD DS  A+A I+  +  D + L
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL

TYK06440.1 TMV resistance protein N [Cucumis melo var. makuwa]2.2e-5560.41Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD FP   SLNF Q+SL S LTILDL++CN+SN DFL+ LSN  T+L ELNLSGNKF  LPSLQNFTSLR L+L NCKFLRN+  +P HCL  VDA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL
        SGCE  VISPDYIAD++FR QDL L +  RE ++  S+IP + NNQTTE   SFS + N+     AL  CVVF+VD DSCDA+  I   + +D + L
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL

XP_008444002.1 PREDICTED: TMV resistance protein N [Cucumis melo]6.5e-5561.14Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD FP   SLNF Q+SL S LTILDL++CN+SN DFL+ LSN  T+L ELNLSGNKF  LPSLQNF+SLR L+L NCKFLRN+  +P HCL  VDA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVD
        SGCE  VISPDYIADI+FR QDL L +  RE ++  S+IP + NNQTTE   SFS + N+     AL  CVVF+VD DSCDA+  I   + +D
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVD

XP_031741747.1 TMV resistance protein N [Cucumis sativus]9.0e-4956.99Show/hide
Query:  CSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDAS
        CSKLD FP R SLNF QES   KLT+LDLK+CN+SN+DFL+TLSNV TSL +LNLSGN FSCLPSLQNF SLR L+L NCKFL+N+  LP H L  V+AS
Subjt:  CSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDAS

Query:  GCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCD-AKASIYCDIYVD
        G E L I PD IAD++F +QD    D+++   + N+EIP Y N QTT   +S    HN      AL  CV+F+ DGDSCD A+  I+ ++ +D
Subjt:  GCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCD-AKASIYCDIYVD

TrEMBL top hitse value%identityAlignment
A0A0A0KNK0 TIR domain-containing protein4.4e-4956.99Show/hide
Query:  CSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDAS
        CSKLD FP R SLNF QES   KLT+LDLK+CN+SN+DFL+TLSNV TSL +LNLSGN FSCLPSLQNF SLR L+L NCKFL+N+  LP H L  V+AS
Subjt:  CSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDAS

Query:  GCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCD-AKASIYCDIYVD
        G E L I PD IAD++F +QD    D+++   + N+EIP Y N QTT   +S    HN      AL  CV+F+ DGDSCD A+  I+ ++ +D
Subjt:  GCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCD-AKASIYCDIYVD

A0A0A0LWV1 TIR domain-containing protein5.7e-5761.42Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD  P   SLNF Q SLCS LTILDL++CN+SN+DFL+ LSN  T+L ELNLSGNKF CLPSL+NFTSLR L+L NCKFLRN+  +P HCL+ +DA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL
        SGCE LVISPDYIAD++FR QDL L +  RE ++  SEIP + NNQTTE  ISFS +HN+     AL  CVVF+VD DS  A+A I+  +  D + L
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL

A0A1S3B9C2 TMV resistance protein N3.1e-5561.14Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD FP   SLNF Q+SL S LTILDL++CN+SN DFL+ LSN  T+L ELNLSGNKF  LPSLQNF+SLR L+L NCKFLRN+  +P HCL  VDA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVD
        SGCE  VISPDYIADI+FR QDL L +  RE ++  S+IP + NNQTTE   SFS + N+     AL  CVVF+VD DSCDA+  I   + +D
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVD

A0A5A7TTC7 TMV resistance protein N3.1e-5561.14Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD FP   SLNF Q+SL S LTILDL++CN+SN DFL+ LSN  T+L ELNLSGNKF  LPSLQNF+SLR L+L NCKFLRN+  +P HCL  VDA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVD
        SGCE  VISPDYIADI+FR QDL L +  RE ++  S+IP + NNQTTE   SFS + N+     AL  CVVF+VD DSCDA+  I   + +D
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVD

A0A5D3C521 TMV resistance protein N1.1e-5560.41Show/hide
Query:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA
        ECS+LD FP   SLNF Q+SL S LTILDL++CN+SN DFL+ LSN  T+L ELNLSGNKF  LPSLQNFTSLR L+L NCKFLRN+  +P HCL  VDA
Subjt:  ECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDA

Query:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL
        SGCE  VISPDYIAD++FR QDL L +  RE ++  S+IP + NNQTTE   SFS + N+     AL  CVVF+VD DSCDA+  I   + +D + L
Subjt:  SGCESLVISPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWL

SwissProt top hitse value%identityAlignment
F4JT82 Probable disease resistance protein At4g195201.4e-0444.62Show/hide
Query:  SLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGCESL-VISPDY
        SL  L+LS N F+ +P S+++F+ L SL+L  C+ LR++P LP   L++++A GC SL +I+PD+
Subjt:  SLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGCESL-VISPDY

Arabidopsis top hitse value%identityAlignment
AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family3.2e-0430.83Show/hide
Query:  CSKLDRFPQRCSLNFLQESLCSKL----------------TILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFL
        C KL   P+   +  L  + C  L                 +L+L   N  + + L    +  T L+ L+LS + F  LP S+++ TSL +L L NCK L
Subjt:  CSKLDRFPQRCSLNFLQESLCSKL----------------TILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFL

Query:  RNMPNLPTHCLEIVDASGCESLVI-SPDYIADI
        +++  LP   L+ +DA GC+SL   S ++  DI
Subjt:  RNMPNLPTHCLEIVDASGCESLVI-SPDYIADI

AT3G44480.1 Disease resistance protein (TIR-NBS-LRR class) family4.2e-0433.82Show/hide
Query:  NFLQE--SLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSG-NKFSCLPSLQNFTSLRSLKLLNCKFLRNMP-NLPTHC-LEIVDASGCESLVIS
        ++L+E  +L +   + +LK  N S+   L +     TSL  L+L   +    LP+++N T LR LKL NC  L  +P ++ T   L+ ++ SGC SLV  
Subjt:  NFLQE--SLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSG-NKFSCLPSLQNFTSLRSLKLLNCKFLRNMP-NLPTHC-LEIVDASGCESLVIS

Query:  PDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNN
        P  I DI     DL + D S    L+   +PS   N
Subjt:  PDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNN

AT4G19520.1 disease resistance protein (TIR-NBS-LRR class) family1.0e-0544.62Show/hide
Query:  SLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGCESL-VISPDY
        SL  L+LS N F+ +P S+++F+ L SL+L  C+ LR++P LP   L++++A GC SL +I+PD+
Subjt:  SLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGCESL-VISPDY

AT5G40100.1 Disease resistance protein (TIR-NBS-LRR class) family1.0e-0532.79Show/hide
Query:  CSKLDRFPQRCSLNFLQESLCSKL-------------TILDLKDCNVSNADFLKTLSNVST---SLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFL
        CSKL   P+   +  L  S C  L             ++  L +  + N   +K+LS+  +    L+ L+LS + F  LP S+++ TSL +L L NCK L
Subjt:  CSKLDRFPQRCSLNFLQESLCSKL-------------TILDLKDCNVSNADFLKTLSNVST---SLSELNLSGNKFSCLP-SLQNFTSLRSLKLLNCKFL

Query:  RNMPNLPTHCLEIVDASGCESL
        +++  LP   L+ +DA GC+SL
Subjt:  RNMPNLPTHCLEIVDASGCESL

AT5G48770.1 Disease resistance protein (TIR-NBS-LRR class) family7.7e-0646.3Show/hide
Query:  LSELNLSGNKFSCLPS-LQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGC
        L +L+LSGN F+CLP+ ++N +S++SL+L NC  L+ +P LP   LE +  S C
Subjt:  LSELNLSGNKFSCLPS-LQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAATGTTCTAAACTCGATAGGTTTCCCCAGAGATGTAGCTTAAATTTTCTCCAAGAAAGCTTATGTTCTAAGCTGACCATATTGGATCTTAAAGATTGCAACGT
ATCAAATGCAGATTTCTTGAAAACTTTATCTAACGTCTCAACCTCCTTATCCGAGCTAAATTTGTCCGGAAACAAATTCTCTTGTCTCCCCTCTCTCCAAAATTTTACGT
CCTTACGGTCTCTTAAATTATTGAATTGCAAGTTTCTTCGAAACATGCCAAATCTTCCCACCCATTGTTTAGAAATAGTGGATGCCAGTGGCTGCGAATCGTTGGTTATA
AGTCCGGACTACATTGCAGATATAATATTCAGGCAACAGGACCTTGGATTGTTGGATGCCTCAAGGGAGTTTGTTCTAATGAACAGTGAGATCCCAAGTTACTTCAACAA
TCAAACGACGGAAAGATGGATAAGTTTTAGCATTGAACACAATAATCCAAATAAGGAACAAGCTTTGTTTACGTGTGTTGTTTTCGAAGTGGATGGAGATTCATGTGATG
CGAAGGCTTCTATTTATTGTGATATTTACGTGGACGATAAATGGCTAAGAAGATTCTGGAAAATCGTTGGCCGATCAAAACAGAATAAATGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAATGTTCTAAACTCGATAGGTTTCCCCAGAGATGTAGCTTAAATTTTCTCCAAGAAAGCTTATGTTCTAAGCTGACCATATTGGATCTTAAAGATTGCAACGT
ATCAAATGCAGATTTCTTGAAAACTTTATCTAACGTCTCAACCTCCTTATCCGAGCTAAATTTGTCCGGAAACAAATTCTCTTGTCTCCCCTCTCTCCAAAATTTTACGT
CCTTACGGTCTCTTAAATTATTGAATTGCAAGTTTCTTCGAAACATGCCAAATCTTCCCACCCATTGTTTAGAAATAGTGGATGCCAGTGGCTGCGAATCGTTGGTTATA
AGTCCGGACTACATTGCAGATATAATATTCAGGCAACAGGACCTTGGATTGTTGGATGCCTCAAGGGAGTTTGTTCTAATGAACAGTGAGATCCCAAGTTACTTCAACAA
TCAAACGACGGAAAGATGGATAAGTTTTAGCATTGAACACAATAATCCAAATAAGGAACAAGCTTTGTTTACGTGTGTTGTTTTCGAAGTGGATGGAGATTCATGTGATG
CGAAGGCTTCTATTTATTGTGATATTTACGTGGACGATAAATGGCTAAGAAGATTCTGGAAAATCGTTGGCCGATCAAAACAGAATAAATGTGGTTAA
Protein sequenceShow/hide protein sequence
MCECSKLDRFPQRCSLNFLQESLCSKLTILDLKDCNVSNADFLKTLSNVSTSLSELNLSGNKFSCLPSLQNFTSLRSLKLLNCKFLRNMPNLPTHCLEIVDASGCESLVI
SPDYIADIIFRQQDLGLLDASREFVLMNSEIPSYFNNQTTERWISFSIEHNNPNKEQALFTCVVFEVDGDSCDAKASIYCDIYVDDKWLRRFWKIVGRSKQNKCG