; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022971 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022971
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 21
Genome locationscaffold12:30836402..30839763
RNA-Seq ExpressionSpg022971
SyntenySpg022971
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0043078 - polar nucleus (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR021384 - Mediator complex, subunit Med21
IPR037212 - Mediator complex, subunit Med7/Med21-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605829.1 Mediator of RNA polymerase II transcription subunit 21, partial [Cucurbita argyrosperma subsp. sororia]5.4e-6187.58Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNC+NLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

XP_022153730.1 mediator of RNA polymerase II transcription subunit 21 [Momordica charantia]6.6e-5986.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTED+ANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

XP_022958635.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata]3.2e-6188.24Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

XP_023532119.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pepo]2.0e-6086.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPT+D+AN  EQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

XP_038893979.1 mediator of RNA polymerase II transcription subunit 21-like [Benincasa hispida]5.0e-5985.62Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVN IAALAFNTFGTLQRDAPPVRLSPNYPEPP HEPTED+ANIAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQL+A               AE+EL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

TrEMBL top hitse value%identityAlignment
A0A0A0KZ00 Mediator of RNA polymerase II transcription subunit 217.1e-5985.62Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPP  EPTEDNA IAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
         VGQELQKQL+A               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

A0A5A7TEZ9 Mediator of RNA polymerase II transcription subunit 217.8e-5884.31Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPP  EPTED+A IAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
         VGQELQKQL+A               AE+EL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

A0A6J1DHM9 Mediator of RNA polymerase II transcription subunit 213.2e-5986.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTED+ANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

A0A6J1H2M0 Mediator of RNA polymerase II transcription subunit 211.5e-6188.24Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

A0A6J1K432 Mediator of RNA polymerase II transcription subunit 211.5e-6188.24Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTED+AN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEA               AEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

SwissProt top hitse value%identityAlignment
C0LU16 Mediator of RNA polymerase II transcription subunit 211.6e-4770.78Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNYPEPP      D+A    EQPK +SA LVKAAKQFD LVAALPLS+GGE  QLKRIAELQ EN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN

Query:  DAVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        D VGQELQKQLEA               AEKEL QVQELF Q ADNCLN+KK +
Subjt:  DAVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD

Q61BU1 Mediator of RNA polymerase II transcription subunit 218.2e-0428.26Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVR---LSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE
        D ++QLQ+ +N +A+L  N  G LQ  APP     +S ++ E P         N A    + +A++ K+AK  ++L+ + P+  G  E++   + +   +
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVR---LSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE

Query:  NDAVGQELQKQL-EAAATTTQLTILMELFVAEKELTQV
        NDAV +E   +L E    +TQL   ++  ++E    Q+
Subjt:  NDAVGQELQKQL-EAAATTTQLTILMELFVAEKELTQV

Q7ZTI5 Mediator of RNA polymerase II transcription subunit 213.7e-0430.91Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS---PNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE
        D ++QLQ+ VN++A    N  G LQ+ APP   S       +  P  PTE+ A      +L +A + + AK  DVL+ +LP  +     Q   + +L+ E
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS---PNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAE

Query:  NDAVGQELQK
        N      L++
Subjt:  NDAVGQELQK

Arabidopsis top hitse value%identityAlignment
AT4G04780.1 mediator 211.1e-4870.78Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNYPEPP      D+A    EQPK +SA LVKAAKQFD LVAALPLS+GGE  QLKRIAELQ EN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNAN-IAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN

Query:  DAVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD
        D VGQELQKQLEA               AEKEL QVQELF Q ADNCLN+KK +
Subjt:  DAVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCCTCCCTTTCAGCAGTTCAGTGTCGCCGCATTGTCACTTCGGTTTAGTGTCACAACCGCCCCCAGATTTCTTCTGCTCGTGCCACCGCAACCTCCTCCTAGAATAAG
GTTCAAGATGGACATAATTTCCCAACTACAGGAACAAGTCAACACCATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGATGCTCCTCCAGTTCGTTTAT
CCCCTAATTATCCCGAACCGCCGCCTCACGAACCTACAGAGGACAATGCAAATATCGCAGAGCAACCCAAACTAATGAGTGCTGCTTTGGTGAAAGCTGCTAAGCAGTTT
GATGTATTGGTTGCAGCATTGCCTTTATCTGATGGGGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGCTGTAGGTCAAGAACTTCAAAA
GCAGCTAGAAGCAGCAGCCACAACTACACAACTAACAATCTTAATGGAACTGTTTGTTGCAGAGAAAGAATTAACACAGGTTCAGGAGCTTTTCAGCCAAGTTGCAGATA
ATTGCTTGAACTTGAAGAAAGCAGATTGA
mRNA sequenceShow/hide mRNA sequence
TCTCCTCCCTTTCAGCAGTTCAGTGTCGCCGCATTGTCACTTCGGTTTAGTGTCACAACCGCCCCCAGATTTCTTCTGCTCGTGCCACCGCAACCTCCTCCTAGAATAAG
GTTCAAGATGGACATAATTTCCCAACTACAGGAACAAGTCAACACCATTGCTGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGATGCTCCTCCAGTTCGTTTAT
CCCCTAATTATCCCGAACCGCCGCCTCACGAACCTACAGAGGACAATGCAAATATCGCAGAGCAACCCAAACTAATGAGTGCTGCTTTGGTGAAAGCTGCTAAGCAGTTT
GATGTATTGGTTGCAGCATTGCCTTTATCTGATGGGGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGCTGTAGGTCAAGAACTTCAAAA
GCAGCTAGAAGCAGCAGCCACAACTACACAACTAACAATCTTAATGGAACTGTTTGTTGCAGAGAAAGAATTAACACAGGTTCAGGAGCTTTTCAGCCAAGTTGCAGATA
ATTGCTTGAACTTGAAGAAAGCAGATTGA
Protein sequenceShow/hide protein sequence
SPPFQQFSVAALSLRFSVTTAPRFLLLVPPQPPPRIRFKMDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPPHEPTEDNANIAEQPKLMSAALVKAAKQF
DVLVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQLEAAATTTQLTILMELFVAEKELTQVQELFSQVADNCLNLKKAD