CuGenDBv2

Gene ID	Spg022981
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	late embryogenesis abundant protein At5g17165-like
Genome location	scaffold12:30381518..30386184
RNA-Seq Expression	Spg022981
Synteny	Spg022981
Gene Ontology terms	NA
InterPro domains	IPR039291 - Late embryogenesis abundant protein At5g17165-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605657.1 ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-39

68.85

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Query:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS
        MAA S LII ARP LAH R P+     S+FTLR GHWSAYEKNPEE++CPTVVPDH++  LSE YW PHP+TGVFGP TT HN +P+DTS   GG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS

Query:  VLELQAWFRHNGLEDSEKPHFL
        VLEL+ WFRH  LED EKPH L
Subjt:  VLELQAWFRHNGLEDSEKPHFL

XP_004143665.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]

5.2e-30

60.47

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Query:  MAATSKLII---IARPLAHLRKP----VPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVIS-PLSESYWVPHPETGVFGPQTTHHNS--IPNDTSTGC
        MA +SK+I+    A P   L  P     PF + F  R+ HWSAYEKN E+QI PT+VP+H+IS  LSE YWVPHPETGVFGP   HHNS  +PNDTS   
Subjt:  MAATSKLII---IARPLAHLRKP----VPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVIS-PLSESYWVPHPETGVFGPQTTHHNS--IPNDTSTGC

Query:  GGRKEGSVLELQAWFRHNGLEDSEKPHFL
         G  EGSVL L+AWFRHNGLED EKPH L
Subjt:  GGRKEGSVLELQAWFRHNGLEDSEKPHFL

XP_022957877.1 late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]

1.1e-35

69.3

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Query:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS
        MAA S LII ARP LAHLR P+     S+FTLR GHWSAYEKNPEE++CPTVVPDH+I  LSE YW PHP+TGVFGP  T HN +P+DTS   GG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS

Query:  VLELQAWFRHNGLE
        VLEL+ WFRH  LE
Subjt:  VLELQAWFRHNGLE

XP_022995249.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]

6.1e-39

68.85

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Query:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS
        MAA S LII ARP LAHLR PV     S+FTLR GHWSAYEKNPEE++CPTVVPDH+I  +SE YW PHP+TGVFGP  + HN +P+DTS   GG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS

Query:  VLELQAWFRHNGLEDSEKPHFL
        VLEL+ WFRH  LED EKPH L
Subjt:  VLELQAWFRHNGLEDSEKPHFL

XP_023532525.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]

3.6e-39

68.85

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Query:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS
        MAA S LII ARP LAHLR P+     S+FTLR GHWSAYEKNPEE++CPTVVPDH+I  +SE YW PHP+TGVFGP  T HN +P+DTS   GG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS

Query:  VLELQAWFRHNGLEDSEKPHFL
        VLEL+ WFRH  LED EKPH L
Subjt:  VLELQAWFRHNGLEDSEKPHFL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRJ5 Uncharacterized protein

2.5e-30

60.47

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Query:  MAATSKLII---IARPLAHLRKP----VPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVIS-PLSESYWVPHPETGVFGPQTTHHNS--IPNDTSTGC
        MA +SK+I+    A P   L  P     PF + F  R+ HWSAYEKN E+QI PT+VP+H+IS  LSE YWVPHPETGVFGP   HHNS  +PNDTS   
Subjt:  MAATSKLII---IARPLAHLRKP----VPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVIS-PLSESYWVPHPETGVFGPQTTHHNS--IPNDTSTGC

Query:  GGRKEGSVLELQAWFRHNGLEDSEKPHFL
         G  EGSVL L+AWFRHNGLED EKPH L
Subjt:  GGRKEGSVLELQAWFRHNGLEDSEKPHFL

A0A1S4E6U6 uncharacterized protein LOC103504694

2.9e-26

57.02

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Query:  AATSKLIIIARPLAHLRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVI-SPLSESYWVPHPETGVFGPQTTHHNS--IPNDTSTGCGGRKEGSV
        AA  +L ++     HL    PF++    R  HWSAYEKN E+ I PT+VP+ VI   LS++YWVPHP+TGVFGP   HHNS  +PNDTS    G  EGSV
Subjt:  AATSKLIIIARPLAHLRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVI-SPLSESYWVPHPETGVFGPQTTHHNS--IPNDTSTGCGGRKEGSV

Query:  LELQAWFRHNGLEDSEKPHFL
        L L+AWFRHNGLED EKPH L
Subjt:  LELQAWFRHNGLEDSEKPHFL

A0A5A7UIY1 Uncharacterized protein

5.8e-27

53.79

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Query:  MAATSKLIIIARPLA----------HLRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVI-SPLSESYWVPHPETGVFGPQTTHHNS--IPNDTS
        MA +SK+I++A   A          H     PF++    R  HWSAYEKN E+ I PT+VP+ VI   LS++YWVPHP+TGVFGP   HH+S  +PNDTS
Subjt:  MAATSKLIIIARPLA----------HLRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVI-SPLSESYWVPHPETGVFGPQTTHHNS--IPNDTS

Query:  TGCGGRKEGSVLELQAWFRHNGLEDSEKPHFL
           GG + GSVL L+AWFRHNGLED EKPH L
Subjt:  TGCGGRKEGSVLELQAWFRHNGLEDSEKPHFL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like

5.2e-36

69.3

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Query:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS
        MAA S LII ARP LAHLR P+     S+FTLR GHWSAYEKNPEE++CPTVVPDH+I  LSE YW PHP+TGVFGP  T HN +P+DTS   GG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS

Query:  VLELQAWFRHNGLE
        VLEL+ WFRH  LE
Subjt:  VLELQAWFRHNGLE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like

3.0e-39

68.85

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Query:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS
        MAA S LII ARP LAHLR PV     S+FTLR GHWSAYEKNPEE++CPTVVPDH+I  +SE YW PHP+TGVFGP  + HN +P+DTS   GG KEGS
Subjt:  MAATSKLIIIARP-LAHLRKPVP--FSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGS

Query:  VLELQAWFRHNGLEDSEKPHFL
        VLEL+ WFRH  LED EKPH L
Subjt:  VLELQAWFRHNGLEDSEKPHFL

SwissProt top hits

e value

%identity

Alignment

F4KFM8 Late embryogenesis abundant protein At5g17165

1.2e-18

43.7

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Query:  MAATSKLI-IIARPLAH-LRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSV
        MAA SK I ++ R + + +R       +FT R  H SAY+KN EE++ P+ VPD +I P S+ YW PHP+TGVFGP ++  N+          G +E SV
Subjt:  MAATSKLI-IIARPLAH-LRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSV

Query:  LELQAWFRHNGLEDSEKPH
        +E +AWFR   LED +K H
Subjt:  LELQAWFRHNGLEDSEKPH

Arabidopsis top hits

e value

%identity

Alignment

AT3G03150.1 unknown protein

1.8e-20

51.14

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Query:  RTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSVLELQAWFRHNGLEDSEKPH
        R+GH SAY+KN E+++  + VPD VI P S+ YW PHP+TGVFGP TT H      ++T  G  ++ +VLE  AWFR   LEDS+K H
Subjt:  RTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSVLELQAWFRHNGLEDSEKPH

AT5G17165.1 unknown protein

8.9e-20

43.7

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Query:  MAATSKLI-IIARPLAH-LRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSV
        MAA SK I ++ R + + +R       +FT R  H SAY+KN EE++ P+ VPD +I P S+ YW PHP+TGVFGP ++  N+          G +E SV
Subjt:  MAATSKLI-IIARPLAH-LRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSV

Query:  LELQAWFRHNGLEDSEKPH
        +E +AWFR   LED +K H
Subjt:  LELQAWFRHNGLEDSEKPH

Sequences

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CDS sequence

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ATGGCCGCCACTTCGAAGCTTATTATTATTGCTCGACCACTCGCTCATTTGCGGAAGCCAGTCCCTTTTTCTTCGGTTTTCACCCTCCGGACAGGTCATTGGTCAGCATA
TGAGAAGAATCCAGAGGAGCAAATCTGCCCAACAGTGGTACCAGACCATGTGATCTCCCCTCTTTCTGAGAGCTACTGGGTCCCACATCCTGAAACCGGAGTTTTTGGGC
CACAAACAACCCACCACAATTCTATTCCAAACGACACGTCGACTGGTTGTGGCGGCCGGAAAGAGGGCTCGGTTCTAGAACTCCAGGCTTGGTTCCGACACAACGGCCTC
GAGGATTCTGAGAAGCCACATTTTCTGTAA

mRNA sequence

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Protein sequence

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MAATSKLIIIARPLAHLRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSVLELQAWFRHNGL
EDSEKPHFL

Spg022981 (gene) of Sponge gourd (cylindrica) v1 genome