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Spg022982 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022982
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold12:29297309..29298548
RNA-Seq ExpressionSpg022982
SyntenySpg022982
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB93492.1 hypothetical protein L484_006967 [Morus notabilis]1.3e-0726.47Show/hide
Query:  SKKKKVERLVRPNVEAPACLATMKRALLCEKAFLAKAG---PLLEFIVNILCRYSWDILNKEPKAAFVP-HIREFYTQIGEEKHIVMF---LRAEKLEEA
        ++  +V++   P  E        KRAL  E+ F+ + G       FI +++  ++W      P AA V   I   Y     E H   F   L  ++L+E 
Subjt:  SKKKKVERLVRPNVEAPACLATMKRALLCEKAFLAKAG---PLLEFIVNILCRYSWDILNKEPKAAFVP-HIREFYTQIGEEKHIVMF---LRAEKLEEA

Query:  LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
        ++    EG +W  +  G        L+P P +W + ++ ++MP++H   + +E  +LLY + KG  LN+G
Subjt:  LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]1.6e-0725.62Show/hide
Query:  IVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKLE-EALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTT
        +++++ R+ W    K P A     ++EFY+ I E     M +    +     ++  Y  ++W G +   + +    L P+  +W + +K+K++PT+H+TT
Subjt:  IVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKLE-EALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTT

Query:  ISQEPVMLLYNIYKGLDLNLG
        +S + ++LL++I  GL +++G
Subjt:  ISQEPVMLLYNIYKGLDLNLG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.3e-0723.74Show/hide
Query:  KKVERLVRPNVEAPACL---ATMKRALLCEKAFL---AKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKL---EEA-
        +K  + V+   EA A         R L  EK F+   ++    L FI  ++ +++W      P+   VP +REFY  + + +   +++R  ++   EEA 
Subjt:  KKVERLVRPNVEAPACL---ATMKRALLCEKAFL---AKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKL---EEA-

Query:  ----------------------------LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
                                    L   A  G +W  S  G    +   L P   VW + +K++++PTTH  T+S++ ++LL+++  G  +N+G
Subjt:  ----------------------------LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.0e-0927.59Show/hide
Query:  RALLCEKAFLAKAGPLLE---FIVNILCRYSWDILNKEPKAAFVPHIREFYTQ--------------------------------IGEEKHIVMFLRAEK
        R L  EK F+      LE   FI +++ +++W +    P+   VP +REFYT                                 I E    V  +   +
Subjt:  RALLCEKAFLAKAGPLLE---FIVNILCRYSWDILNKEPKAAFVPHIREFYTQ--------------------------------IGEEKHIVMFLRAEK

Query:  LEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
        L   L   A  G +W  S  G    L   L P   VW + +K++++PTTH  T+S+E V LLY++  G  +N+G
Subjt:  LEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

XP_038882424.1 uncharacterized protein LOC120073695 [Benincasa hispida]9.7e-0841.89Show/hide
Query:  LEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
        LE+ALS+    G++W    TG+  L S  L PK  +W+Y++K  + PTTHD TIS++ VM  Y I   + +N+G
Subjt:  LEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.0e-0724.14Show/hide
Query:  RALLCEKAFL---AKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKL---EEA-------------------------
        R L  EK F+   ++    L FI  ++ +++W      P+   VP +REFY  + +     +++R  ++   EEA                         
Subjt:  RALLCEKAFL---AKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKL---EEA-------------------------

Query:  ----LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
            L   A  G +W  S  G    +   L P   VW + +K+ ++PTTH  T+S++ ++LL+++  G  +N+G
Subjt:  ----LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

A0A2P5BCG4 Uncharacterized protein (Fragment)3.0e-0723.74Show/hide
Query:  KKVERLVRPNVEAPACL---ATMKRALLCEKAFL---AKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKL---EEA-
        +K  + V+   EA A         R L  EK F+   ++    L FI  ++ +++W      P+   VP +REFY  + + +   +++R  ++   EEA 
Subjt:  KKVERLVRPNVEAPACL---ATMKRALLCEKAFL---AKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKL---EEA-

Query:  ----------------------------LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
                                    L   A  G +W  S  G    +   L P   VW + +K++++PTTH  T+S++ ++LL+++  G  +N+G
Subjt:  ----------------------------LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

A0A2P5DAQ2 Uncharacterized protein5.0e-1027.59Show/hide
Query:  RALLCEKAFLAKAGPLLE---FIVNILCRYSWDILNKEPKAAFVPHIREFYTQ--------------------------------IGEEKHIVMFLRAEK
        R L  EK F+      LE   FI +++ +++W +    P+   VP +REFYT                                 I E    V  +   +
Subjt:  RALLCEKAFLAKAGPLLE---FIVNILCRYSWDILNKEPKAAFVPHIREFYTQ--------------------------------IGEEKHIVMFLRAEK

Query:  LEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
        L   L   A  G +W  S  G    L   L P   VW + +K++++PTTH  T+S+E V LLY++  G  +N+G
Subjt:  LEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein8.0e-0825.62Show/hide
Query:  IVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKLE-EALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTT
        +++++ R+ W    K P A     ++EFY+ I E     M +    +     ++  Y  ++W G +   + +    L P+  +W + +K+K++PT+H+TT
Subjt:  IVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKLE-EALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTT

Query:  ISQEPVMLLYNIYKGLDLNLG
        +S + ++LL++I  GL +++G
Subjt:  ISQEPVMLLYNIYKGLDLNLG

W9S7D3 Uncharacterized protein6.1e-0826.47Show/hide
Query:  SKKKKVERLVRPNVEAPACLATMKRALLCEKAFLAKAG---PLLEFIVNILCRYSWDILNKEPKAAFVP-HIREFYTQIGEEKHIVMF---LRAEKLEEA
        ++  +V++   P  E        KRAL  E+ F+ + G       FI +++  ++W      P AA V   I   Y     E H   F   L  ++L+E 
Subjt:  SKKKKVERLVRPNVEAPACLATMKRALLCEKAFLAKAG---PLLEFIVNILCRYSWDILNKEPKAAFVP-HIREFYTQIGEEKHIVMF---LRAEKLEEA

Query:  LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG
        ++    EG +W  +  G        L+P P +W + ++ ++MP++H   + +E  +LLY + KG  LN+G
Subjt:  LSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTTISQEPVMLLYNIYKGLDLNLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAAGCAAAGATTCTAACAAAAGAAGAAGCTGATAAACTGGAGGAGGAAAGAACAAGGAAGCTGAGAGAAGAGGAACTGGAGGTTGCGCTAAACTTCATAGTAGT
TCATGTGCAGTTTGTGGCTGCAACTGTGGTGCAAACAGAAAAGAAAGAAGACATTGCACAATCTCCTGAGGTGCAACCCCAAGAGCAACCACCACCACAACCAGAGGATC
AACCTGTTCTCGAGGAACTGTTCGAGCATCAGAACAAAACTATGCCCGAGGACCCGTTCGAGCACAAGGAAAACACGGAGCAACAAGCTTCAGAAGAGGAAGATGAGGTC
CTAGAAATTACAAAGGACCAGATGCCCAAAAGGGGTCGAGATGAAGACAGTGAGCCTGAGGTGAAAAGCAAAAATAAGAGAAAAAAAAATGTACCCTTCAGAAGGCTAAG
CACCAGGGGAGCTACCACAGTACAACCCCAAGTGCAGATGCCACCTCCATCTCCAATGCCATCACCACCACCACCACAACAGGAAAAGAAAAACCCCTCCTTACCAAAGC
CAAAGAAGTCTCAAAGCAAGAAGAAGAAGGTGGAGAGGCTAGTAAGGCCTAATGTTGAGGCACCAGCTTGCCTTGCAACCATGAAGAGAGCCTTGTTGTGCGAAAAGGCA
TTCTTAGCAAAAGCAGGCCCTCTTCTAGAGTTTATTGTCAATATCCTATGCAGGTACAGCTGGGACATACTGAATAAGGAACCAAAAGCAGCTTTTGTTCCCCATATTAG
AGAATTTTACACTCAAATTGGGGAAGAGAAGCATATAGTTATGTTCCTGAGGGCTGAGAAATTGGAGGAGGCGTTGTCTATGTTTGCTTATGAAGGAATAAAGTGGCAAG
GGTCAAGAACAGGGGTCCGAGCTCTGCTTTCTGGAGATCTAAAGCCCAAGCCAGCAGTGTGGCTCTATGTGATCAAGAACAAAATGATGCCAACAACGCATGACACGACC
ATTTCCCAAGAGCCTGTCATGCTGTTATACAACATATACAAAGGCTTGGATCTCAACCTTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAAGCAAAGATTCTAACAAAAGAAGAAGCTGATAAACTGGAGGAGGAAAGAACAAGGAAGCTGAGAGAAGAGGAACTGGAGGTTGCGCTAAACTTCATAGTAGT
TCATGTGCAGTTTGTGGCTGCAACTGTGGTGCAAACAGAAAAGAAAGAAGACATTGCACAATCTCCTGAGGTGCAACCCCAAGAGCAACCACCACCACAACCAGAGGATC
AACCTGTTCTCGAGGAACTGTTCGAGCATCAGAACAAAACTATGCCCGAGGACCCGTTCGAGCACAAGGAAAACACGGAGCAACAAGCTTCAGAAGAGGAAGATGAGGTC
CTAGAAATTACAAAGGACCAGATGCCCAAAAGGGGTCGAGATGAAGACAGTGAGCCTGAGGTGAAAAGCAAAAATAAGAGAAAAAAAAATGTACCCTTCAGAAGGCTAAG
CACCAGGGGAGCTACCACAGTACAACCCCAAGTGCAGATGCCACCTCCATCTCCAATGCCATCACCACCACCACCACAACAGGAAAAGAAAAACCCCTCCTTACCAAAGC
CAAAGAAGTCTCAAAGCAAGAAGAAGAAGGTGGAGAGGCTAGTAAGGCCTAATGTTGAGGCACCAGCTTGCCTTGCAACCATGAAGAGAGCCTTGTTGTGCGAAAAGGCA
TTCTTAGCAAAAGCAGGCCCTCTTCTAGAGTTTATTGTCAATATCCTATGCAGGTACAGCTGGGACATACTGAATAAGGAACCAAAAGCAGCTTTTGTTCCCCATATTAG
AGAATTTTACACTCAAATTGGGGAAGAGAAGCATATAGTTATGTTCCTGAGGGCTGAGAAATTGGAGGAGGCGTTGTCTATGTTTGCTTATGAAGGAATAAAGTGGCAAG
GGTCAAGAACAGGGGTCCGAGCTCTGCTTTCTGGAGATCTAAAGCCCAAGCCAGCAGTGTGGCTCTATGTGATCAAGAACAAAATGATGCCAACAACGCATGACACGACC
ATTTCCCAAGAGCCTGTCATGCTGTTATACAACATATACAAAGGCTTGGATCTCAACCTTGGATGA
Protein sequenceShow/hide protein sequence
MQEAKILTKEEADKLEEERTRKLREEELEVALNFIVVHVQFVAATVVQTEKKEDIAQSPEVQPQEQPPPQPEDQPVLEELFEHQNKTMPEDPFEHKENTEQQASEEEDEV
LEITKDQMPKRGRDEDSEPEVKSKNKRKKNVPFRRLSTRGATTVQPQVQMPPPSPMPSPPPPQQEKKNPSLPKPKKSQSKKKKVERLVRPNVEAPACLATMKRALLCEKA
FLAKAGPLLEFIVNILCRYSWDILNKEPKAAFVPHIREFYTQIGEEKHIVMFLRAEKLEEALSMFAYEGIKWQGSRTGVRALLSGDLKPKPAVWLYVIKNKMMPTTHDTT
ISQEPVMLLYNIYKGLDLNLG