; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023026 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023026
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold12:29814684..29815453
RNA-Seq ExpressionSpg023026
SyntenySpg023026
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.6e-2037.05Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + ++N DPL++ATS    ++ D A L+FTP +  IIAS+ S R +ATL+LS ++FTT+S+D N H  ++SL  F+ A+    +  S+TIHLL   +QM L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV
         F+  S       SE  PL    H +L   L  P ++   +G  ++   KYF +KSK L RI+  LP+      N  I                      
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV

Query:  TVCVRVTNSQVKFSVGSHEIILTQ
         + V VTNS+VKFS+ S EIILT+
Subjt:  TVCVRVTNSQVKFSVGSHEIILTQ

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]1.4e-2337.44Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + +E  +PL++ATSL   +  D A ++FTP  L II SN S + VATL+LS R FT +S+D N    ++SL PF+ A+    +  S+TIHLL T +QM L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTV
         FE             +P   VP L     L   P Q ++LG + YG +FT+ S++L RI+  LP+  +                             TV
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTV

Query:  CVRVTNSQVKFSVGSHEIILTQEVRIC
         V VT SQVKFS+ S EIILT+E   C
Subjt:  CVRVTNSQVKFSVGSHEIILTQEVRIC

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]5.6e-2037.05Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + ++N DPL++ATS    ++ D A L+FTP +  IIAS+ S R +ATL+LS ++FTT+S+D N H  ++SL  F+ A+    +  S+TIHLL   +QM L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV
         F+  S       SE  PL    H +L   L  P ++   +G  ++   KYF +KSK L RI+  LP+      N  I                      
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV

Query:  TVCVRVTNSQVKFSVGSHEIILTQ
         + V VTNS+VKFS+ S EIILT+
Subjt:  TVCVRVTNSQVKFSVGSHEIILTQ

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]7.8e-2236.21Show/hide
Query:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTI
        M    + +++ DPL +ATS    +   EA ++FTP   +IIASN S R VA L+++   F  Y +D N H  RISL  F+ AL     S S+TIHLL  I
Subjt:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTI

Query:  HQMTLTFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYSRFIFIYLEEISASC
         Q+ L FE+SS              +V H      L   PSQ +DLG++ Y K+F+I SKDL R++  LP+  G+                         
Subjt:  HQMTLTFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYSRFIFIYLEEISASC

Query:  SLFVTVCVRVTNSQVKFSVGSHEIILTQEVRI
            ++CV  T SQVKFS+ S EI+LT+E ++
Subjt:  SLFVTVCVRVTNSQVKFSVGSHEIILTQEVRI

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]4.3e-2035.71Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + + N DPL++ATS F  ++ D+A ++FTP +  II+S+ S R +ATL+LS ++FT++S+D + H  ++SL  F+ A+    +  S+TIHLL   +Q+ L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV
         F+  S       SE  PL    H +L   L  P ++   +G  ++  GKYF +KSK L RI+  LP+      N  I                      
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV

Query:  TVCVRVTNSQVKFSVGSHEIILTQ
         VCV VTNS+VKFS+ S EI+L +
Subjt:  TVCVRVTNSQVKFSVGSHEIILTQ

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980106.9e-2437.44Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + +E  +PL++ATSL   +  D A ++FTP  L II SN S + VATL+LS R FT +S+D N    ++SL PF+ A+    +  S+TIHLL T +QM L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTV
         FE             +P   VP L     L   P Q ++LG + YG +FT+ S++L RI+  LP+  +                             TV
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTV

Query:  CVRVTNSQVKFSVGSHEIILTQEVRIC
         V VT SQVKFS+ S EIILT+E   C
Subjt:  CVRVTNSQVKFSVGSHEIILTQEVRIC

A0A1S3CL88 uncharacterized protein LOC1035022502.7e-2037.05Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + ++N DPL++ATS    ++ D A L+FTP +  IIAS+ S R +ATL+LS ++FTT+S+D N H  ++SL  F+ A+    +  S+TIHLL   +QM L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV
         F+  S       SE  PL    H +L   L  P ++   +G  ++   KYF +KSK L RI+  LP+      N  I                      
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV

Query:  TVCVRVTNSQVKFSVGSHEIILTQ
         + V VTNS+VKFS+ S EIILT+
Subjt:  TVCVRVTNSQVKFSVGSHEIILTQ

A0A1S4E4N8 uncharacterized protein LOC1035022633.8e-2236.21Show/hide
Query:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTI
        M    + +++ DPL +ATS    +   EA ++FTP   +IIASN S R VA L+++   F  Y +D N H  RISL  F+ AL     S S+TIHLL  I
Subjt:  MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTI

Query:  HQMTLTFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYSRFIFIYLEEISASC
         Q+ L FE+SS              +V H      L   PSQ +DLG++ Y K+F+I SKDL R++  LP+  G+                         
Subjt:  HQMTLTFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPML-GEALGNPMISLYSRFIFIYLEEISASC

Query:  SLFVTVCVRVTNSQVKFSVGSHEIILTQEVRI
            ++CV  T SQVKFS+ S EI+LT+E ++
Subjt:  SLFVTVCVRVTNSQVKFSVGSHEIILTQEVRI

A0A5D3BTK3 Uncharacterized protein1.1e-1632.59Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + +E  +PL++ATSL   +  D A ++FTP  L II SN S + VATL+LS R FT +S+D N    ++SL PF+ A+ +   SH +     P  H++ L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTV
        +                                 P Q ++LG + YG +FT+ S++L RI+  LP+  +                             TV
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTV

Query:  CVRVTNSQVKFSVGSHEIILTQEV
         V VT SQVKFS+ S EIILT+EV
Subjt:  CVRVTNSQVKFSVGSHEIILTQEV

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein2.7e-2037.05Show/hide
Query:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL
        + ++N DPL++ATS    ++ D A L+FTP +  IIAS+ S R +ATL+LS ++FTT+S+D N H  ++SL  F+ A+    +  S+TIHLL   +QM L
Subjt:  MNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTL

Query:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV
         F+  S       SE  PL    H +L   L  P ++   +G  ++   KYF +KSK L RI+  LP+      N  I                      
Subjt:  TFENSSQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLG--DIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFV

Query:  TVCVRVTNSQVKFSVGSHEIILTQ
         + V VTNS+VKFS+ S EIILT+
Subjt:  TVCVRVTNSQVKFSVGSHEIILTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTCATGCGGATGAATGTTGAAAACCTTGATCCTCTCATGGAAGCAACCTCCCTATTCACTCACTTAACCAACGACGAAGCCTACCTCGAATTCACGCCATGGAG
GTTGACGATAATTGCCTCAAACCATTCCTCTCGCATCGTTGCAACGCTCAAACTTTCCTTTCGATTCTTCACAACCTATTCCATCGACCAGAATCCTCACAGATACAGGA
TTTCCCTTCATCCCTTCTACCACGCCCTCTCGGTTGCCCGAAATTCTCATTCAATCACCATTCATCTTCTCCCAACCATACATCAAATGACCCTTACATTCGAGAATTCA
AGTCAGTATTTAATCGATCTTGCTTCAGAATCTTCACCTTTAGGGCGTGTCCCACACTTGCAGTTGCTACAACCATTGGTATCGCCACCTTCGCAAGGACAGGATTTAGG
CGATATCGTATATGGAAAATATTTCACAATTAAATCCAAAGATCTAATACGCATTCTATCCACACTACCTATGTTAGGAGAGGCTTTAGGTAATCCAATGATTTCTCTTT
ACTCTCGTTTCATATTTATTTACTTGGAAGAAATTAGTGCAAGTTGTTCTCTTTTTGTCACAGTTTGTGTTAGGGTAACAAATTCACAAGTCAAATTTTCTGTTGGATCT
CACGAGATTATTCTTACCCAAGAGGTACGAATTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTCATGCGGATGAATGTTGAAAACCTTGATCCTCTCATGGAAGCAACCTCCCTATTCACTCACTTAACCAACGACGAAGCCTACCTCGAATTCACGCCATGGAG
GTTGACGATAATTGCCTCAAACCATTCCTCTCGCATCGTTGCAACGCTCAAACTTTCCTTTCGATTCTTCACAACCTATTCCATCGACCAGAATCCTCACAGATACAGGA
TTTCCCTTCATCCCTTCTACCACGCCCTCTCGGTTGCCCGAAATTCTCATTCAATCACCATTCATCTTCTCCCAACCATACATCAAATGACCCTTACATTCGAGAATTCA
AGTCAGTATTTAATCGATCTTGCTTCAGAATCTTCACCTTTAGGGCGTGTCCCACACTTGCAGTTGCTACAACCATTGGTATCGCCACCTTCGCAAGGACAGGATTTAGG
CGATATCGTATATGGAAAATATTTCACAATTAAATCCAAAGATCTAATACGCATTCTATCCACACTACCTATGTTAGGAGAGGCTTTAGGTAATCCAATGATTTCTCTTT
ACTCTCGTTTCATATTTATTTACTTGGAAGAAATTAGTGCAAGTTGTTCTCTTTTTGTCACAGTTTGTGTTAGGGTAACAAATTCACAAGTCAAATTTTCTGTTGGATCT
CACGAGATTATTCTTACCCAAGAGGTACGAATTTGCTGA
Protein sequenceShow/hide protein sequence
MLFMRMNVENLDPLMEATSLFTHLTNDEAYLEFTPWRLTIIASNHSSRIVATLKLSFRFFTTYSIDQNPHRYRISLHPFYHALSVARNSHSITIHLLPTIHQMTLTFENS
SQYLIDLASESSPLGRVPHLQLLQPLVSPPSQGQDLGDIVYGKYFTIKSKDLIRILSTLPMLGEALGNPMISLYSRFIFIYLEEISASCSLFVTVCVRVTNSQVKFSVGS
HEIILTQEVRIC