CuGenDBv2

Gene ID	Spg023044
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Deoxycytidylate deaminase-like
Genome location	scaffold12:28556724..28560778
RNA-Seq Expression	Spg023044
Synteny	Spg023044
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR015517 - Deoxycytidylate deaminase-related IPR016193 - Cytidine deaminase-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573132.1 Deoxycytidylate deaminase, partial [Cucurbita argyrosperma subsp. sororia]

8.3e-27

80.82

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHRP+FDLSRNDA LNN HSQC FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

KAG7012317.1 Deoxycytidylate deaminase [Cucurbita argyrosperma subsp. argyrosperma]

8.3e-27

80.82

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHRP+FDLSRNDA LNN HSQC FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

XP_022955223.1 deoxycytidylate deaminase isoform X1 [Cucurbita moschata]

8.3e-27

80.82

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHRP+FDLSRNDA LNN HSQC FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

XP_022955224.1 deoxycytidylate deaminase isoform X2 [Cucurbita moschata]

8.3e-27

80.82

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHRP+FDLSRNDA LNN HSQC FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

XP_023542768.1 deoxycytidylate deaminase isoform X3 [Cucurbita pepo subsp. pepo]

2.0e-25

78.08

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHR +FDLSRNDA LNN HS+C FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZF4 deoxycytidylate deaminase isoform X1

9.9e-26

79.45

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHR RFDLSRN ALLNN  SQC FDPSKREG+LSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

A0A1S4E674 deoxycytidylate deaminase isoform X2

9.9e-26

79.45

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHR RFDLSRN ALLNN  SQC FDPSKREG+LSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

A0A5A7UHA6 Deoxycytidylate deaminase isoform X1

9.9e-26

79.45

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHR RFDLSRN ALLNN  SQC FDPSKREG+LSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

A0A6J1GTC6 deoxycytidylate deaminase isoform X1

4.0e-27

80.82

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHRP+FDLSRNDA LNN HSQC FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

A0A6J1GVI9 deoxycytidylate deaminase isoform X2

4.0e-27

80.82

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Query:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        FFNPKKHRP+FDLSRNDA LNN HSQC FDPSKR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  FFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

SwissProt top hits

e value

%identity

Alignment

P32321 Deoxycytidylate deaminase

4.7e-09

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Query:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACL-TKEEQIVNVSTSNLP
        KR+ YL W +YFM +AFL A+RSKDPN QVGAC+   E +IV +  + +P
Subjt:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACL-TKEEQIVNVSTSNLP

Q5M9G0 Deoxycytidylate deaminase

1.4e-08

45.95

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Query:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTK-EEQIVNVSTSNLPISLKLIL----RFAE-KIDTRNSY
        KR+ YL W +YFM +AFL A+RSKDP+ QVGAC+   E +IV +  + +P      L    R AE K+DT+  Y
Subjt:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTK-EEQIVNVSTSNLPISLKLIL----RFAE-KIDTRNSY

Q5RC69 Deoxycytidylate deaminase

4.7e-09

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Query:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACL-TKEEQIVNVSTSNLP
        KR+ YL W +YFM +AFL A+RSKDPN QVGAC+   E +IV +  + +P
Subjt:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACL-TKEEQIVNVSTSNLP

Q8K2D6 Deoxycytidylate deaminase

1.4e-08

45.95

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Query:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTK-EEQIVNVSTSNLPISLKLIL----RFAE-KIDTRNSY
        KR+ YL W +YFM +AFL A+RSKDP+ QVGAC+   E +IV +  + +P      L    R AE K+DT+  Y
Subjt:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTK-EEQIVNVSTSNLPISLKLIL----RFAE-KIDTRNSY

Q9VWA2 Probable deoxycytidylate deaminase

1.7e-06

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Query:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLT-KEEQIVNVSTSNLP
        KR+ YL WDDYFM  + L A+RSKDP  QVGAC+   + +IV +  +  P
Subjt:  KREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLT-KEEQIVNVSTSNLP

Arabidopsis top hits

e value

%identity

Alignment

AT3G48540.1 Cytidine/deoxycytidylate deaminase family protein

5.9e-15

54.55

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Query:  RFF--NPKKHRPR-FDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV
        RFF  NPK  + R F  +   A+     +   F P KR GYLSWDDYFM IAFL AERSKDPNRQVGACL  +  ++
Subjt:  RFF--NPKKHRPR-FDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIV

Sequences

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CDS sequence

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ATGCTTGATGCCAAAAACGAGTGCCAAACCGCACCTTATATAGTGCTCCAAGGCCGACAGCTTCGCGACGCTAACGTCACAGTGTCGCGACGCTGTGACGTAATTGTCTT
GATCCCCAAGTTATCCCAGCGTCTCGACGCTGTCCTTCGGCTGGGAATTTCCAGATTGCGAATTTGGCTGATTTTTGGGCTTCTCCTTCAATCTTTTGGCCCAACTGGCA
CACCTCGCGAAAAATTCTTTAGCCGCCTCTCACCGTCTCGCGCAAACGCCCAAATCCAGAGAACTGCAACACGAACGCCGGCGACCTTCGATTCTCCAAACCCAAACGCC
GGCGACCTTCGATTCTTTAATCCCAAAAAGCATCGTCCTCGGTTTGATTTGTCAAGAAATGATGCTCTCTTGAACAACGAACATTCACAGTGTCTTTTCGATCCTTCCAA
ACGCGAAGGGTATTTGTCATGGGATGACTATTTCATGGTCATTGCATTCCTGTTGGCGGAAAGATCGAAGGATCCCAATCGGCAGGTTGGTGCATGCCTGACCAAGGAGG
AACAAATTGTTAATGTGTCAACATCCAATTTGCCAATATCTTTGAAGTTAATTCTTAGGTTTGCTGAAAAGATTGATACAAGGAACTCATACTCGCAATTTGAGCTAGAT
GAAGTGCGGGTAGAGTGGGCTGAATTTCTGGGTCGCTACATCTGGTGGCGACTACTTTGA

mRNA sequence

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Protein sequence

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MLDAKNECQTAPYIVLQGRQLRDANVTVSRRCDVIVLIPKLSQRLDAVLRLGISRLRIWLIFGLLLQSFGPTGTPREKFFSRLSPSRANAQIQRTATRTPATFDSPNPNA
GDLRFFNPKKHRPRFDLSRNDALLNNEHSQCLFDPSKREGYLSWDDYFMVIAFLLAERSKDPNRQVGACLTKEEQIVNVSTSNLPISLKLILRFAEKIDTRNSYSQFELD
EVRVEWAEFLGRYIWWRLL

Spg023044 (gene) of Sponge gourd (cylindrica) v1 genome