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Spg023054 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023054
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSAM domain-containing protein
Genome locationscaffold12:29868948..29870363
RNA-Seq ExpressionSpg023054
SyntenySpg023054
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606819.1 hypothetical protein SDJN03_00161, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2170.41Show/hide
Query:  SHELPLSLLVLFPSLSSSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SH  P S +  F  LS +           SLVYEYGLAL+HNELE E IVYFN+EFLQSIGISIAKHRLEILKLARKD A LHPRPITRLLLAIKRT+
Subjt:  SHELPLSLLVLFPSLSSSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

XP_022948497.1 uncharacterized protein LOC111452156 [Cucurbita moschata]3.2e-2289.86Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SLVYEYGLAL+HNELE E IVYFN+EFLQSIGISIAKHRLEILKLARKD A LHPRPITRLLLAIKRT+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

XP_022998747.1 uncharacterized protein LOC111493318 [Cucurbita maxima]3.2e-2289.86Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SLVYEYGLAL+HNELE E IVYFN+EFLQSIGISIAKHRLEILKLARKD A LHPRPITRLLLAIKRT+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

XP_023525324.1 uncharacterized protein LOC111788960 [Cucurbita pepo subsp. pepo]3.2e-2289.86Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SLVYEYGLAL+HNELE E IVYFN+EFLQSIGISIAKHRLEILKLARKD A LHPRPITRLLLAIKRT+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

XP_038900622.1 uncharacterized protein LOC120087790 [Benincasa hispida]3.8e-2377.91Show/hide
Query:  HPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFT
        HP  SLVYEYGLALA+NELEHE I+YFN+EFLQSIGISIAKHRLEILKLARKD+A LHPRPITRLLLA+K+T+  RR   L   FT
Subjt:  HPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFT

TrEMBL top hitse value%identityAlignment
A0A0A0KVK9 Uncharacterized protein3.9e-2163.16Show/hide
Query:  SSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFTALQRV
        S LS  SL HP  SLVYEYGLALA+NELEHE I+YFN+EFLQSIGISIAKHRLEILKL  K++A LHPRPITR+LLA+K+T+  RR   L   FT     
Subjt:  SSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFTALQRV

Query:  LRPGAPTATVLRSS
        L        V +SS
Subjt:  LRPGAPTATVLRSS

A0A5A7TQT5 Uncharacterized protein5.0e-2163.16Show/hide
Query:  SSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFTALQRV
        S LS  SL HP  SLVYEYGLALA+NELE+E I+YFN+EFLQSIGISIAKHRLEILKL RK++A LHPRPITR+LLA+K+T+  RR   L   FT     
Subjt:  SSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFTALQRV

Query:  LRPGAPTATVLRSS
        L        V +SS
Subjt:  LRPGAPTATVLRSS

A0A6J1DIZ2 uncharacterized protein LOC1110209211.7e-2184.06Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SLVYEYGLA AHNELE + IVYFN+EFLQS+GISIAKHRLEILKLARK++A LHPRP+TRLLLAIKRT+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

A0A6J1G9F1 uncharacterized protein LOC1114521561.6e-2289.86Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SLVYEYGLAL+HNELE E IVYFN+EFLQSIGISIAKHRLEILKLARKD A LHPRPITRLLLAIKRT+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

A0A6J1K8U0 uncharacterized protein LOC1114933181.6e-2289.86Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR
        SLVYEYGLAL+HNELE E IVYFN+EFLQSIGISIAKHRLEILKLARKD A LHPRPITRLLLAIKRT+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein2.6e-1763.89Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHP---RPITRLLLAIKRTR
        SL++EYGL+ + NELEHE I YF++EFLQS+GISIAKHRLEILKLAR+D     P   R I+R++ AIK+TR
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHP---RPITRLLLAIKRTR

AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein8.8e-1861.25Show/hide
Query:  SLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDH--ALLHPRPITRLLLAIKRT
        S  S  +   SL+YEYGL+ ++NELE+E I YFN+EFLQS+GISIAKHRLEILKLAR+D   + L  R I R+L+AIK+T
Subjt:  SLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDH--ALLHPRPITRLLLAIKRT

AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)3.7e-0837.5Show/hide
Query:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALL---HPRPITRLLLA--IKRTRC--SRRQGRLTNGFTALQRVLR
        +L YEYGL  A  +L+ E I  FN+ FL+ +G+++ KHR+EILKL++++   L   + RP++  L++  IK T+   +R    L+ G TA+   L+
Subjt:  SLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALL---HPRPITRLLLA--IKRTRC--SRRQGRLTNGFTALQRVLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCGACGGCGACGGACGGCGGCTTCTCCATCCTCCCCCGAATCCTCCCTTTCTTTCTTTCCCTTTCTTTCTCCCTCTCTTCTCTCCCCTCCTCCCACGAACTCCC
TCTCTCCCTTCTGGTTCTCTTCCCCTCTCTCTCCTCTTCTCTTTCTCTCTTCTCCCTCGCCCACCCTTCCCTTTCCCTCGTCTACGAGTACGGCCTCGCCTTAGCCCACA
ACGAGCTCGAACACGAAGGCATCGTCTACTTCAACTATGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCTCGCAAGGAC
CACGCCCTCCTCCATCCCCGTCCCATCACTCGCCTCCTCCTCGCCATCAAGCGGACCCGGTGCTCAAGAAGGCAAGGTAGGCTTACCAATGGTTTTACTGCGCTTCAACG
CGTCTTACGACCTGGAGCACCAACCGCAACAGTCCTTCGCAGCAGTCCGTCTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCGACGGCGACGGACGGCGGCTTCTCCATCCTCCCCCGAATCCTCCCTTTCTTTCTTTCCCTTTCTTTCTCCCTCTCTTCTCTCCCCTCCTCCCACGAACTCCC
TCTCTCCCTTCTGGTTCTCTTCCCCTCTCTCTCCTCTTCTCTTTCTCTCTTCTCCCTCGCCCACCCTTCCCTTTCCCTCGTCTACGAGTACGGCCTCGCCTTAGCCCACA
ACGAGCTCGAACACGAAGGCATCGTCTACTTCAACTATGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCTCGCAAGGAC
CACGCCCTCCTCCATCCCCGTCCCATCACTCGCCTCCTCCTCGCCATCAAGCGGACCCGGTGCTCAAGAAGGCAAGGTAGGCTTACCAATGGTTTTACTGCGCTTCAACG
CGTCTTACGACCTGGAGCACCAACCGCAACAGTCCTTCGCAGCAGTCCGTCTCAGTGA
Protein sequenceShow/hide protein sequence
MDATATDGGFSILPRILPFFLSLSFSLSSLPSSHELPLSLLVLFPSLSSSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKD
HALLHPRPITRLLLAIKRTRCSRRQGRLTNGFTALQRVLRPGAPTATVLRSSPSQ