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Spg023059 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023059
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationscaffold12:28331997..28332811
RNA-Seq ExpressionSpg023059
SyntenySpg023059
Gene Ontology termsGO:0010506 - regulation of autophagy (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605678.1 CDGSH iron-sulfur domain-containing protein NEET, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3575.96Show/hide
Query:  MASTVAISSFSIIHPPRRNVNGGG---RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  A S+     PP  N   GG   RR +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVAISSFSIIHPPRRNVNGGG---RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_022159571.1 CDGSH iron-sulfur domain-containing protein NEET [Momordica charantia]1.2e-3576.7Show/hide
Query:  AISSFSIIHPPRRNV------NGGGRRRLVVVRAE-GGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        +++S S  H   RN+       GGGRRRL VVRAE G EPINPAIRKSEDKVVDSVL+++LAKPLTAYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  AISSFSIIHPPRRNV------NGGGRRRLVVVRAE-GGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

XP_022958373.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita moschata]2.0e-3575.96Show/hide
Query:  MASTVAISSFSIIHPPRRNVNGGG---RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  A S+     PP  N   GG   RR +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVAISSFSIIHPPRRNVNGGG---RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]6.3e-3778.64Show/hide
Query:  MASTVAISSFSIIHPPRRNVNGGG--RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        MAS  A S+     PP  N   GG  RRR+VVVRAEGGE INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASTVAISSFSIIHPPRRNVNGGG--RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]1.8e-3678.64Show/hide
Query:  MASTVAISSFSIIHPPRRNVNGGG--RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        MAS  A S+     PP  N   GG  RRR+VVVRAEGGE INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASTVAISSFSIIHPPRRNVNGGG--RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

TrEMBL top hitse value%identityAlignment
A0A1S3CTC1 CDGSH iron-sulfur domain-containing protein NEET8.4e-3576.85Show/hide
Query:  MASTVAISSFSIIHPPR------RNVNGGGRRRLVVVRAEG--GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN
        MAS VAISS S     R      R+ N  GRRR VVVRAEG  GE INPAIRKSE+KVVDSVL+AEL+KPLT YCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASTVAISSFSIIHPPR------RNVNGGGRRRLVVVRAEG--GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A5A7UKN7 CDGSH iron-sulfur domain-containing protein NEET8.4e-3576.85Show/hide
Query:  MASTVAISSFSIIHPPR------RNVNGGGRRRLVVVRAEG--GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN
        MAS VAISS S     R      R+ N  GRRR VVVRAEG  GE INPAIRKSE+KVVDSVL+AEL+KPLT YCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASTVAISSFSIIHPPR------RNVNGGGRRRLVVVRAEG--GEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A6J1E4B9 CDGSH iron-sulfur domain-containing protein NEET5.8e-3676.7Show/hide
Query:  AISSFSIIHPPRRNV------NGGGRRRLVVVRAE-GGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        +++S S  H   RN+       GGGRRRL VVRAE G EPINPAIRKSEDKVVDSVL+++LAKPLTAYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  AISSFSIIHPPRRNV------NGGGRRRLVVVRAE-GGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

A0A6J1H2X5 CDGSH iron-sulfur domain-containing protein NEET9.9e-3675.96Show/hide
Query:  MASTVAISSFSIIHPPRRNVNGGG---RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL
        MAS  A S+     PP  N   GG   RR +VVVRAEGG+ INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASTVAISSFSIIHPPRRNVNGGG---RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET3.1e-3778.64Show/hide
Query:  MASTVAISSFSIIHPPRRNVNGGG--RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL
        MAS  A S+     PP  N   GG  RRR+VVVRAEGGE INPAIRKSEDKVVDSV+VA+LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASTVAISSFSIIHPPRRNVNGGG--RRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

SwissProt top hitse value%identityAlignment
Q05B71 CDGSH iron-sulfur domain-containing protein 25.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B5.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A5.8e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q7T326 CDGSH iron-sulfur domain-containing protein 23.4e-1758.73Show/hide
Query:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET1.7e-3276.67Show/hide
Query:  PRRNVNGG--GRR--RLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        P + V GG  GR+  R+VVVRAEGG  INP IRK+EDKVVDSV+V EL+K +T YCRCWRSGTFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  PRRNVNGG--GRR--RLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding1.2e-3376.67Show/hide
Query:  PRRNVNGG--GRR--RLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ
        P + V GG  GR+  R+VVVRAEGG  INP IRK+EDKVVDSV+V EL+K +T YCRCWRSGTFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  PRRNVNGG--GRR--RLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACTGTGGCCATTTCTTCCTTCTCAATAATCCATCCTCCTCGTCGCAACGTCAACGGCGGCGGACGACGGCGACTGGTGGTGGTGAGAGCCGAAGGCGGCGA
ACCCATAAACCCTGCAATCAGGAAGAGCGAAGACAAAGTGGTGGACTCTGTGCTTGTCGCTGAACTTGCCAAGCCCCTCACTGCCTATTGCAGATGTTGGAGGTCAGGCA
CATTTCCTTTGTGTGATGGTAGCCATGTGAAGCACAACAAGGCTACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACTGTGGCCATTTCTTCCTTCTCAATAATCCATCCTCCTCGTCGCAACGTCAACGGCGGCGGACGACGGCGACTGGTGGTGGTGAGAGCCGAAGGCGGCGA
ACCCATAAACCCTGCAATCAGGAAGAGCGAAGACAAAGTGGTGGACTCTGTGCTTGTCGCTGAACTTGCCAAGCCCCTCACTGCCTATTGCAGATGTTGGAGGTCAGGCA
CATTTCCTTTGTGTGATGGTAGCCATGTGAAGCACAACAAGGCTACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAG
Protein sequenceShow/hide protein sequence
MASTVAISSFSIIHPPRRNVNGGGRRRLVVVRAEGGEPINPAIRKSEDKVVDSVLVAELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ