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Spg023077 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023077
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold12:29260231..29263541
RNA-Seq ExpressionSpg023077
SyntenySpg023077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038227.1 hypothetical protein E6C27_scaffold270G00670 [Cucumis melo var. makuwa]2.2e-1253.06Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL
        RLF+ +AGS +RFTP +      PTDPL+NNWF VQP N  P        P VQ  +S LKGTT LLS   VGVNS L    + SYL    LEMGGLL
Subjt:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL

KAA0047005.1 hypothetical protein E6C27_scaffold230G001970 [Cucumis melo var. makuwa]4.6e-1055.13Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFL
        RLFV +AGS +RFTP +      PTDPL+NNWF  QP NR P        P VQ  +S LKGTT LLS   VGVNS L
Subjt:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFL

KAA0057124.1 hypothetical protein E6C27_scaffold153G00170 [Cucumis melo var. makuwa]3.5e-1052.33Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC---PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDYVPS
        RLFV +AGS +RFT  L +  C   PTDPL+NNWF VQP N  P        PFVQ  +S LKGTT LLS   VGVN  L    P+
Subjt:  RLFVAIAGSNFRFTPILLLVPC---PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDYVPS

KAA0057136.1 hypothetical protein E6C27_scaffold153G00300 [Cucumis melo var. makuwa]1.2e-1047.62Show/hide
Query:  DLWESI-EIGNEKGLLEGSSSREIYEGRLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVG
        +LW+S+ E+  ++   EG S       RLFV + GS +RFTP ++     PTDPL+NNWF VQP N  P  T     P VQ  +S LKGTT LLS   VG
Subjt:  DLWESI-EIGNEKGLLEGSSSREIYEGRLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVG

Query:  VNSFL
        VNS L
Subjt:  VNSFL

TYK30622.1 hypothetical protein E5676_scaffold84664G00370 [Cucumis melo var. makuwa]5.8e-1354.08Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL
        RLF+ +AGS +RFTP +      PTDPL+NNWF VQP N  P  T     P VQ  +S LKGTT LLS   VGVNS L    + SYL    LEMGGLL
Subjt:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL

TrEMBL top hitse value%identityAlignment
A0A5A7T9D5 Uncharacterized protein1.1e-1253.06Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL
        RLF+ +AGS +RFTP +      PTDPL+NNWF VQP N  P        P VQ  +S LKGTT LLS   VGVNS L    + SYL    LEMGGLL
Subjt:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL

A0A5A7U028 Uncharacterized protein2.2e-1055.13Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFL
        RLFV +AGS +RFTP +      PTDPL+NNWF  QP NR P        P VQ  +S LKGTT LLS   VGVNS L
Subjt:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFL

A0A5A7UPJ1 Uncharacterized protein1.7e-1052.33Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC---PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDYVPS
        RLFV +AGS +RFT  L +  C   PTDPL+NNWF VQP N  P        PFVQ  +S LKGTT LLS   VGVN  L    P+
Subjt:  RLFVAIAGSNFRFTPILLLVPC---PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDYVPS

A0A5A7USJ6 Uncharacterized protein5.9e-1147.62Show/hide
Query:  DLWESI-EIGNEKGLLEGSSSREIYEGRLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVG
        +LW+S+ E+  ++   EG S       RLFV + GS +RFTP ++     PTDPL+NNWF VQP N  P  T     P VQ  +S LKGTT LLS   VG
Subjt:  DLWESI-EIGNEKGLLEGSSSREIYEGRLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVG

Query:  VNSFL
        VNS L
Subjt:  VNSFL

A0A5D3E3Z2 Uncharacterized protein2.8e-1354.08Show/hide
Query:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL
        RLF+ +AGS +RFTP +      PTDPL+NNWF VQP N  P  T     P VQ  +S LKGTT LLS   VGVNS L    + SYL    LEMGGLL
Subjt:  RLFVAIAGSNFRFTPILLLVPC-PTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDY-VPSYLPVPILEMGGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTCAGAACGTACTAATGGAGGAGACCGAAGGATGTGTTGACACACTTCCCGCTCCCACTTACTATAAATACTCCATTCACCTTGGTAGGAGGTGTTCCATAAA
CCGTCAACTTAAATACCTCCAGCCTTATACAGCATCTAATCAGCAACTCCCTTTGATTCGTTTGATCACGAACGGTGTGTGGACCACCTCTAGTGTCTTCCCTACTATTC
TCCGGGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGAGAAGGGATTGCTTGAAGGTTCAAGCTCTAGAGAGATATATGAAGGTAGGTTGTTCGTAGCTATA
GCTGGGTCAAATTTCCGTTTTACCCCTATACTACTTCTTGTTCCTTGTCCCACTGATCCTCTAATGAACAATTGGTTTGTGGTCCAACCAACAAACCGAGTCCCTCTCGG
GACAGTGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAACACTTAAGGGAACAACCTCTCTACTATCCCTAATTCGGGTAGGAGTGAATTCCTTCTTGCAGGACT
ATGTCCCCAGCTATCTACCCGTTCCTATCCTTGAAATGGGAGGCTTATTGAGTCGGCGATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTCAGAACGTACTAATGGAGGAGACCGAAGGATGTGTTGACACACTTCCCGCTCCCACTTACTATAAATACTCCATTCACCTTGGTAGGAGGTGTTCCATAAA
CCGTCAACTTAAATACCTCCAGCCTTATACAGCATCTAATCAGCAACTCCCTTTGATTCGTTTGATCACGAACGGTGTGTGGACCACCTCTAGTGTCTTCCCTACTATTC
TCCGGGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGAGAAGGGATTGCTTGAAGGTTCAAGCTCTAGAGAGATATATGAAGGTAGGTTGTTCGTAGCTATA
GCTGGGTCAAATTTCCGTTTTACCCCTATACTACTTCTTGTTCCTTGTCCCACTGATCCTCTAATGAACAATTGGTTTGTGGTCCAACCAACAAACCGAGTCCCTCTCGG
GACAGTGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAACACTTAAGGGAACAACCTCTCTACTATCCCTAATTCGGGTAGGAGTGAATTCCTTCTTGCAGGACT
ATGTCCCCAGCTATCTACCCGTTCCTATCCTTGAAATGGGAGGCTTATTGAGTCGGCGATGCTGA
Protein sequenceShow/hide protein sequence
MKSQNVLMEETEGCVDTLPAPTYYKYSIHLGRRCSINRQLKYLQPYTASNQQLPLIRLITNGVWTTSSVFPTILRAKNDLWESIEIGNEKGLLEGSSSREIYEGRLFVAI
AGSNFRFTPILLLVPCPTDPLMNNWFVVQPTNRVPLGTVRGRDPFVQAPESTLKGTTSLLSLIRVGVNSFLQDYVPSYLPVPILEMGGLLSRRC