; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023083 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023083
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationscaffold12:30822606..30823975
RNA-Seq ExpressionSpg023083
SyntenySpg023083
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-8387.77Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS+RLC  ARVW  SS+ LRS N NS  FSSASMSES ES+S+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKLS
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLS

KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-8387.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS+RLC  ARVW  SS+ LRS N NS  FSSASMSES ES+S+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]1.3e-8387.83Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK

XP_022951521.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita moschata]2.9e-8388.24Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKL

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]3.8e-8387.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase1.4e-8388.24Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase6.3e-8487.83Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase1.5e-7783.25Show/hide
Query:  MTSVISASRFTLSIPNSTRL--CLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG
        M SVISASRFT SI  ST+L  C R+RVW SSSLSLRS NRNSN FSS SMSES ESNS  P DD     E+T DVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTSVISASRFTLSIPNSTRL--CLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        CHASVSA+WLNKDDPHT EYCSP NIDSMHKVTLEVKGETQIVNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKL K
Subjt:  CHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase1.8e-8387.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK

A0A6J1KTS0 Aminoacyl-tRNA hydrolase4.1e-8387.7Show/hide
Query:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD12.0e-2649.58Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y   R +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSIFFKKLKLSK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSIFFKKLKLSK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD12.1e-2852.1Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y   R ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSIFFKKLKLSK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSIFFKKLKLSK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD14.9e-2547.9Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y   + +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSIFFKKLKLSK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSIFFKKLKLSK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein2.0e-5371.92Show/hide
Query:  FSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNL
        F++AS S S ++  I  + D  + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGCHASV+AIW  KDDP T +YC P++IDSMHKVTLEVKGETQ++NL
Subjt:  FSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNL

Query:  SEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK
        SEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS FFKKLKL K
Subjt:  SEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATGACATCTGTAATTTCAGCATCTCGATTCACACTCTCCATTCCCAATTCCACCAGGCTCTGTCTGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGGTC
TACGAATCGAAATTCCAATCCATTTAGCTCAGCTTCGATGAGTGAATCCACTGAAAGTAATTCCATTCTTCCATTGGACGACGGCGGAGCGAAGGCGGAGGAGACCGTCG
ATGTTTTGGTTCAGTACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAAC
AAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCAGAAACATCGATTCTATGCACAAGGTTACTCTTGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAAAA
ACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCCCAAATCTGTTGTATCAATATTTTTTA
AAAAGCTGAAACTCTCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATCATGACATCTGTAATTTCAGCATCTCGATTCACACTCTCCATTCCCAATTCCACCAGGCTCTGTCTGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGGTC
TACGAATCGAAATTCCAATCCATTTAGCTCAGCTTCGATGAGTGAATCCACTGAAAGTAATTCCATTCTTCCATTGGACGACGGCGGAGCGAAGGCGGAGGAGACCGTCG
ATGTTTTGGTTCAGTACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAAC
AAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCAGAAACATCGATTCTATGCACAAGGTTACTCTTGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAAAA
ACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCCCAAATCTGTTGTATCAATATTTTTTA
AAAAGCTGAAACTCTCTAAGTGA
Protein sequenceShow/hide protein sequence
IMTSVISASRFTLSIPNSTRLCLRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLN
KDDPHTSEYCSPRNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSIFFKKLKLSK