; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023122 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023122
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold11:16477047..16485507
RNA-Seq ExpressionSpg023122
SyntenySpg023122
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150317.1 uncharacterized protein LOC111018514 [Momordica charantia]2.2e-1552.13Show/hide
Query:  KPAKNQESNLEALMKEYMARND--------------AAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYPV
        +PA N  ++LE + KEYMARND              A +RNLEVQ+G+ A ++K RPQG+ P  TE+  R+G EQCKAVTLRS L Y+GPK PV
Subjt:  KPAKNQESNLEALMKEYMARND--------------AAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYPV

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]5.2e-1758.82Show/hide
Query:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP
        P +N  SNLE +MKEYMAR DA +       RN   Q+G +A E+KNRPQG+ P  TE+  REGKEQCKAVTLRS L YDGP  P
Subjt:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]5.2e-1758.82Show/hide
Query:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP
        P +N  SNLE +MKEYMAR DA +       RN E Q+G++A E+KNRPQG+ P  TE+  REGKEQCKAVTLRS L YD P  P
Subjt:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP

XP_030494994.1 uncharacterized protein LOC115710785 [Cannabis sativa]2.4e-1461.97Show/hide
Query:  KPAKNQESNLEALMKEYMARNDAA--VRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRS
        +P  +Q S+LE+LM++YMA+NDAA  +RNL++Q+GK+A ++KNRPQGTLPS TE   R+GKE CKA+TLRS
Subjt:  KPAKNQESNLEALMKEYMARNDAA--VRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRS

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]5.4e-1459.21Show/hide
Query:  KPAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRS
        +P  +Q S+LE+LM++YMA+NDA +       RNLEVQ+G++A ++KNRPQGTLPS TE   R+GKE CKAVTLRS
Subjt:  KPAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRS

TrEMBL top hitse value%identityAlignment
A0A6J1DAE9 uncharacterized protein LOC1110185141.1e-1552.13Show/hide
Query:  KPAKNQESNLEALMKEYMARND--------------AAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYPV
        +PA N  ++LE + KEYMARND              A +RNLEVQ+G+ A ++K RPQG+ P  TE+  R+G EQCKAVTLRS L Y+GPK PV
Subjt:  KPAKNQESNLEALMKEYMARND--------------AAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYPV

A0A6J1DW02 uncharacterized protein LOC1110248972.5e-1758.82Show/hide
Query:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP
        P +N  SNLE +MKEYMAR DA +       RN   Q+G +A E+KNRPQG+ P  TE+  REGKEQCKAVTLRS L YDGP  P
Subjt:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP

A0A6J1DYG0 uncharacterized protein LOC1110257642.5e-1758.82Show/hide
Query:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP
        P +N  SNLE +MKEYMAR DA +       RN E Q+G++A E+KNRPQG+ P  TE+  REGKEQCKAVTLRS L YD P  P
Subjt:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP

A0A6J1DZC3 uncharacterized protein LOC1110244491.1e-1255.07Show/hide
Query:  EALMKEYMARNDAAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP
        +  +++Y +RNDAA+RNLE Q+G++A E+KNRP+GTLPS TE    EG+E CK +T RS L Y+ PK P
Subjt:  EALMKEYMARNDAAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP

A0A6J1E110 uncharacterized protein LOC1110254245.8e-1454.12Show/hide
Query:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP
        P +N  SNLE  MKEYMAR DA +       RN E Q+G +A  +KNRPQG+    TE+   EGKE CKAVTLRS L YD P  P
Subjt:  PAKNQESNLEALMKEYMARNDAAV-------RNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATCAAGAGAAATACAT
CTGCAGTGAGAAGAGTCCATTAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGCAAGATCAAGATCAAGATCAAAAGCTGGGTGTTGGTTGCTGTATTTTTCTGTTTAT
CAAAGGTTTTGGCGAAGCGGTTCAAGAATTTCTTCAAGGTCACAGAAATGTGCATAACGGTTGAGGTCAATAAGGGAACCATAACCAGAGCAGATGGAATCCATACTCGG
CTACATACAACCCAGGTTTCAGACAACATCCAAACTTCTCTTGGGGAGGACAAGCCGGCTAAAAATCAAGAGTCAAATCTAGAGGCTCTTATGAAAGAGTACATGGCAAG
AAATGATGCCGCAGTTAGAAATTTGGAAGTACAGATTGGAAAGATTGCTCAAGAAATAAAAAATAGACCACAAGGGACGTTGCCCAGCAAGACTGAGATCTCTCATCGAG
AAGGAAAAGAGCAGTGCAAGGCAGTCACCTTGAGAAGTGAACTAAAGTATGATGGTCCCAAATACCCCGTGAATCAAGAAGATGACCTAGGCAACTTGGCTTTAATCCTG
AGTGGATTATGGACTCCTGTCCGTGAGGGATTGTCCTTTGATTTGTTGTTCATTAGAGAAGCACTGACACTTAAGGATAAAGAGCGAGAAAAAGGGTGTTTTGCTGCTGG
TTTTTGTGTGAATTCAAGGGATCTTTGTGAAACGATCAAGAACTTCATCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATCAAGAGAAATACAT
CTGCAGTGAGAAGAGTCCATTAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGCAAGATCAAGATCAAGATCAAAAGCTGGGTGTTGGTTGCTGTATTTTTCTGTTTAT
CAAAGGTTTTGGCGAAGCGGTTCAAGAATTTCTTCAAGGTCACAGAAATGTGCATAACGGTTGAGGTCAATAAGGGAACCATAACCAGAGCAGATGGAATCCATACTCGG
CTACATACAACCCAGGTTTCAGACAACATCCAAACTTCTCTTGGGGAGGACAAGCCGGCTAAAAATCAAGAGTCAAATCTAGAGGCTCTTATGAAAGAGTACATGGCAAG
AAATGATGCCGCAGTTAGAAATTTGGAAGTACAGATTGGAAAGATTGCTCAAGAAATAAAAAATAGACCACAAGGGACGTTGCCCAGCAAGACTGAGATCTCTCATCGAG
AAGGAAAAGAGCAGTGCAAGGCAGTCACCTTGAGAAGTGAACTAAAGTATGATGGTCCCAAATACCCCGTGAATCAAGAAGATGACCTAGGCAACTTGGCTTTAATCCTG
AGTGGATTATGGACTCCTGTCCGTGAGGGATTGTCCTTTGATTTGTTGTTCATTAGAGAAGCACTGACACTTAAGGATAAAGAGCGAGAAAAAGGGTGTTTTGCTGCTGG
TTTTTGTGTGAATTCAAGGGATCTTTGTGAAACGATCAAGAACTTCATCTACTAA
Protein sequenceShow/hide protein sequence
MGPTLFMAREGFLFAGWTTNRLFIRGALVLKDQEKYICSEKSPLGPTGSSIRALSKIKIKIKSWVLVAVFFCLSKVLAKRFKNFFKVTEMCITVEVNKGTITRADGIHTR
LHTTQVSDNIQTSLGEDKPAKNQESNLEALMKEYMARNDAAVRNLEVQIGKIAQEIKNRPQGTLPSKTEISHREGKEQCKAVTLRSELKYDGPKYPVNQEDDLGNLALIL
SGLWTPVREGLSFDLLFIREALTLKDKEREKGCFAAGFCVNSRDLCETIKNFIY