; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023135 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023135
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:16377398..16384393
RNA-Seq ExpressionSpg023135
SyntenySpg023135
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046253.1 uncharacterized protein E6C27_scaffold284G00560 [Cucumis melo var. makuwa]3.3e-3545.24Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+     S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS NL V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRA +GY+S EPVRI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKVA+
Subjt:  TRKGKAKVAD

KAA0060609.1 uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa]1.5e-3544.76Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+  T  S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS N  V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRAG+GY+S EP+RI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKV +
Subjt:  TRKGKAKVAD

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]4.3e-3544.76Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNEKTETSRESKVSL-SQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ ++    + +    L ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS NL V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNEKTETSRESKVSL-SQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRAG+GY+S EPVRI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKVA+
Subjt:  TRKGKAKVAD

TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]1.5e-3544.76Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+  T  S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS N  V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRAG+GY+S EP+RI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKV +
Subjt:  TRKGKAKVAD

TYK18947.1 uncharacterized protein E5676_scaffold418G00310 [Cucumis melo var. makuwa]3.3e-3545.24Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+     S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS NL V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRA +GY+S EPVRI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKVA+
Subjt:  TRKGKAKVAD

TrEMBL top hitse value%identityAlignment
A0A5A7TRQ6 RNase H domain-containing protein1.6e-3545.24Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+     S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS NL V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRA +GY+S EPVRI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKVA+
Subjt:  TRKGKAKVAD

A0A5A7TZU9 Ribonuclease H2.1e-3544.76Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNEKTETSRESKVSL-SQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ ++    + +    L ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS NL V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNEKTETSRESKVSL-SQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRAG+GY+S EPVRI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKVA+
Subjt:  TRKGKAKVAD

A0A5A7V4F2 Reverse transcriptase domain-containing protein7.2e-3644.76Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+  T  S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS N  V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRAG+GY+S EP+RI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKV +
Subjt:  TRKGKAKVAD

A0A5D3BTY1 Ribonuclease H7.2e-3644.76Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+  T  S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS N  V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRAG+GY+S EP+RI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKV +
Subjt:  TRKGKAKVAD

A0A5D3D5V8 RNase H domain-containing protein1.6e-3545.24Show/hide
Query:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-
        + E +S++VP+ K + K  ++  T K+ N+     S+++  S ++TK    + EK+   + + +N PVLRY+PLSR KKG+SPF ECS NL V + EIL 
Subjt:  IREAMSSKVPLIKSSNKPGRQKSTGKELNE-KTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEIL-

Query:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI
                                           FDPKAYKL+AK GYDFTT TE K ++IFD+RPE S TQKKLQK+GY+I  SRA +GY+S EPVRI
Subjt:  -----------------------------------FDPKAYKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRI

Query:  TRKGKAKVAD
        T KGKAKVA+
Subjt:  TRKGKAKVAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAGTGAGAAGAGTGCAACTGTCCATTAGGTCCCACTGTGAAGAGAATAAGAAGGTTGCTGCGTTTTTGTTCGTTGAAGCGTCGTTGGCGAAGAACGGT
CAAGTCTACAACGAAGACCCACAGCTGAACTCTTCTCACTGTAGACCTATACCGTACCAGCGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCATTAAACAG
AAAGTTCCTCTCGGGCCAGATACCCCCGCTTGCATGTCTCCTACATGGACGCCTTGGATTAATACGTCTGTATCGGATACAAAGCGGGTCGTATCACATAGTGTT
ACCAGGATAAGGGAAGCTATGTCGTCAAAAGTTCCTTTGATCAAAAGCAGCAACAAACCTGGGCGACAAAAAAGCACGGGAAAAGAGCTGAATGAAAAAACAGAA
ACTTCTCGAGAAAGCAAGGTATCTCTTAGCCAAACAAAAGCTGAAGTGGCAAAAAATGAGAAGGTATTATGTTCAGAAGGGAAGAAGACAAACGCTCCTGTCTTG
CGCTATGTTCCTTTATCTCGACACAAGAAGGGTGATTCGCCATTTCCAGAATGCTCCAATAATTTAAGAGTTGGTGACATTGAAATTTTGTTTGACCCTAAAGCA
TACAAACTATTGGCAAAGGTCGGCTATGATTTCACGACCCATACTGAGTTTAAACGTTTACGGATCTTTGATCAAAGACCTGAATTTTCCTCAACGCAGAAGAAA
CTTCAAAAAGAAGGTTATGCTATATCCATCTCAAGGGCTGGACTTGGATATAAGTCTCCTGAGCCAGTTCGAATTACAAGAAAAGGGAAAGCAAAAGTTGCAGAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAGTGAGAAGAGTGCAACTGTCCATTAGGTCCCACTGTGAAGAGAATAAGAAGGTTGCTGCGTTTTTGTTCGTTGAAGCGTCGTTGGCGAAGAACGGT
CAAGTCTACAACGAAGACCCACAGCTGAACTCTTCTCACTGTAGACCTATACCGTACCAGCGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCATTAAACAG
AAAGTTCCTCTCGGGCCAGATACCCCCGCTTGCATGTCTCCTACATGGACGCCTTGGATTAATACGTCTGTATCGGATACAAAGCGGGTCGTATCACATAGTGTT
ACCAGGATAAGGGAAGCTATGTCGTCAAAAGTTCCTTTGATCAAAAGCAGCAACAAACCTGGGCGACAAAAAAGCACGGGAAAAGAGCTGAATGAAAAAACAGAA
ACTTCTCGAGAAAGCAAGGTATCTCTTAGCCAAACAAAAGCTGAAGTGGCAAAAAATGAGAAGGTATTATGTTCAGAAGGGAAGAAGACAAACGCTCCTGTCTTG
CGCTATGTTCCTTTATCTCGACACAAGAAGGGTGATTCGCCATTTCCAGAATGCTCCAATAATTTAAGAGTTGGTGACATTGAAATTTTGTTTGACCCTAAAGCA
TACAAACTATTGGCAAAGGTCGGCTATGATTTCACGACCCATACTGAGTTTAAACGTTTACGGATCTTTGATCAAAGACCTGAATTTTCCTCAACGCAGAAGAAA
CTTCAAAAAGAAGGTTATGCTATATCCATCTCAAGGGCTGGACTTGGATATAAGTCTCCTGAGCCAGTTCGAATTACAAGAAAAGGGAAAGCAAAAGTTGCAGAT
TAG
Protein sequenceShow/hide protein sequence
MSAVRRVQLSIRSHCEENKKVAAFLFVEASLAKNGQVYNEDPQLNSSHCRPIPYQRSSNEQPVYGPTIKQKVPLGPDTPACMSPTWTPWINTSVSDTKRVVSHSV
TRIREAMSSKVPLIKSSNKPGRQKSTGKELNEKTETSRESKVSLSQTKAEVAKNEKVLCSEGKKTNAPVLRYVPLSRHKKGDSPFPECSNNLRVGDIEILFDPKA
YKLLAKVGYDFTTHTEFKRLRIFDQRPEFSSTQKKLQKEGYAISISRAGLGYKSPEPVRITRKGKAKVAD