; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023162 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023162
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:13086618..13088047
RNA-Seq ExpressionSpg023162
SyntenySpg023162
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]3.5e-1134.48Show/hide
Query:  LLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIID-SPNLARLQRTQEARQGGLVC
        LLPT+HDSTVSRER+ + + I+    I+VGK+IA EIF C H+  GKLFF   I+  C+   VP   ++  +  KG++   P+ A  + T          
Subjt:  LLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIID-SPNLARLQRTQEARQGGLVC

Query:  GIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASF
            + E+L+     Q+    + QT W Y R RD  + + L+ ++
Subjt:  GIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASF

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.1e-1934.78Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQEA-
        RLLPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID+  +AR+      + TQ+  
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQEA-

Query:  ----------RQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED
                  R  G +    + LEQ       Q++          +Q Q FW Y + RD AL+KALQ +F++P PT P FP ++L         E E E 
Subjt:  ----------RQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED

Query:  DDAGQED
        D  G  +
Subjt:  DDAGQED

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]9.3e-2035.27Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQE--
        RLLPTTH  TVS++R+LL +++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L   G ID+  +AR+      + TQ+  
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQE--

Query:  ---------ARQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED
                 +R  G +    + LEQ       Q++          +Q Q FW Y + RD AL+KALQ +F++P PT P FP +LL         E E E 
Subjt:  ---------ARQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED

Query:  DDAGQED
        D  G  +
Subjt:  DDAGQED

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.6e-1935.71Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL-------------
        RLLPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID+  +AR+             
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL-------------

Query:  -QRTQEARQGGLVCGIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKEDDDAGQED
          R   A        + Q L+ L    ++QE   +Q Q FW Y + RD AL+KALQ +F++P PT P FP ++L         E E E D  G  +
Subjt:  -QRTQEARQGGLVCGIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKEDDDAGQED

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.8e-1030.91Show/hide
Query:  LLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILL---HKGIIDSPNLARL-QRTQEARQ-G
        L PTTHDS++S E+++L + ++   +I+VGK++   I  C  ++ GKLFFP+ I  L  + GVPE  +D+++     K  ID   +++L +R++  R+  
Subjt:  LLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILL---HKGIIDSPNLARL-QRTQEARQ-G

Query:  GLVCGIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLN
        G+   + ++LEQ   S +  +F   Q       ++   A L   L+AS  K         +DL N
Subjt:  GLVCGIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLN

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.0e-1934.78Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQEA-
        RLLPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID+  +AR+      + TQ+  
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQEA-

Query:  ----------RQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED
                  R  G +    + LEQ       Q++          +Q Q FW Y + RD AL+KALQ +F++P PT P FP ++L         E E E 
Subjt:  ----------RQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED

Query:  DDAGQED
        D  G  +
Subjt:  DDAGQED

A0A2P5CEY2 Uncharacterized protein4.5e-2035.27Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQE--
        RLLPTTH  TVS++R+LL +++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L   G ID+  +AR+      + TQ+  
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL------QRTQE--

Query:  ---------ARQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED
                 +R  G +    + LEQ       Q++          +Q Q FW Y + RD AL+KALQ +F++P PT P FP +LL         E E E 
Subjt:  ---------ARQGGLVCGIHQILEQLTLSANRQEF--------GERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKED

Query:  DDAGQED
        D  G  +
Subjt:  DDAGQED

A0A2P5DXM3 Uncharacterized protein2.2e-1935.71Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL-------------
        RLLPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ I+ LC+    P    +  L + G ID+  +AR+             
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARL-------------

Query:  -QRTQEARQGGLVCGIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKEDDDAGQED
          R   A        + Q L+ L    ++QE   +Q Q FW Y + RD AL+KALQ +F++P PT P FP ++L         E E E D  G  +
Subjt:  -QRTQEARQGGLVCGIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKEDDDAGQED

A0A6A3ASF6 Uncharacterized protein1.9e-1031.21Show/hide
Query:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARLQRTQEARQGGLV-
        +L+PT+H++ VS  R+LL  +++ S  IDVG+II  ++  C  KK   L FPN I+ LC +  V E+A D IL     I    L  L   +  +    V 
Subjt:  RLLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARLQRTQEARQGGLV-

Query:  ---CGIHQILEQLTLSANRQEFGERQAQ---------TFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLL
            G  +   +  L A  ++  + QAQ          F+ YV+ RDA +    Q          P FPD++L
Subjt:  ---CGIHQILEQLTLSANRQEFGERQAQ---------TFWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLL

A0A7J6FZ22 Uncharacterized protein1.7e-1134.48Show/hide
Query:  LLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIID-SPNLARLQRTQEARQGGLVC
        LLPT+HDSTVSRER+ + + I+    I+VGK+IA EIF C H+  GKLFF   I+  C+   VP   ++  +  KG++   P+ A  + T          
Subjt:  LLPTTHDSTVSRERVLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIID-SPNLARLQRTQEARQGGLVC

Query:  GIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASF
            + E+L+     Q+    + QT W Y R RD  + + L+ ++
Subjt:  GIHQILEQLTLSANRQEFGERQAQTFWTYVRRRDAALRKALQASF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCTGTTACGCCTGAAGGTCATCGAAGACATTGCAGAAGAAGTAGTCGCTGAGGAAGAACCGAAAGATTATGAAAAAGAAAAAGATCCTGAGAAGATTGTTGAAAC
AGAGCAAGAGAGTCAGGAAAAGGCAGCAACAGATTTGCAGGAGCAAGGTAATAATGAAATAGTAGTTCAAGCGGTTCTCGAAGAGATAGTGCAGGACCCGTCGCGCCGTC
GCCGCTGCAAGCAGAAAGCAGGGTGGATTAAAAGGATTCGGACTGATACTCCATCTCCTCCTTCGACTGAATCGGAAAAAGAAGAACCTGAAAATCAAGAAGAAGCCGAG
AAAGAAGCTGCAGAAGGTGAAACTGAAAAGAAGACTCATGAAGATAAGGGCAAATGTATTATAGGAGCTGAGGTTGAAGTAGAAGTGGCAAGGCCAGAAGAACAGAGATT
ACTGTATCAACGTTTTGTCAATGATTTTGCTAGGGCAAAATATATTGACATGTTAAAGGGAGATTTTCTGTTCGAGAGGGGGTTTAGTGGTGATCTTCCGCACTTTTTAA
GAGCAGGCATCACGAACCATGGTTGGGAGTTGTTCTGTTCCAAGCCAGAACCCGTGAACTTGCAGAGGCTGCTTCCAACAACTCATGACTCCACGGTCTCTCGGGAAAGA
GTTCTTTTGGCTTTTGCAATTCTATGGTCTCTTAGCATCGACGTGGGTAAAATTATTGCGGGTGAAATTTTTGGATGTTGGCATAAGAAGGTTGGGAAATTGTTCTTTCC
AAATACAATCTCAATGCTTTGTAAGAGAGTAGGGGTTCCAGAAAGCGCAGAAGATGTGATTCTACTACATAAGGGAATAATTGACTCGCCTAACTTGGCACGACTTCAGC
GGACACAGGAAGCACGCCAAGGGGGGCTAGTCTGTGGCATTCACCAGATCTTAGAACAACTCACACTTTCAGCCAACAGACAAGAGTTCGGTGAAAGGCAAGCCCAAACC
TTCTGGACTTATGTTAGAAGACGTGATGCTGCATTAAGGAAGGCACTTCAAGCTAGCTTTTCAAAGCCCTACCCAACCCTTCCTGTATTCCCAGATGATTTGTTGAACCC
TTGGATCCCACCACCACCTGTTGAGAGAGAAAAGGAAGATGATGATGCTGGTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACCTGTTACGCCTGAAGGTCATCGAAGACATTGCAGAAGAAGTAGTCGCTGAGGAAGAACCGAAAGATTATGAAAAAGAAAAAGATCCTGAGAAGATTGTTGAAAC
AGAGCAAGAGAGTCAGGAAAAGGCAGCAACAGATTTGCAGGAGCAAGGTAATAATGAAATAGTAGTTCAAGCGGTTCTCGAAGAGATAGTGCAGGACCCGTCGCGCCGTC
GCCGCTGCAAGCAGAAAGCAGGGTGGATTAAAAGGATTCGGACTGATACTCCATCTCCTCCTTCGACTGAATCGGAAAAAGAAGAACCTGAAAATCAAGAAGAAGCCGAG
AAAGAAGCTGCAGAAGGTGAAACTGAAAAGAAGACTCATGAAGATAAGGGCAAATGTATTATAGGAGCTGAGGTTGAAGTAGAAGTGGCAAGGCCAGAAGAACAGAGATT
ACTGTATCAACGTTTTGTCAATGATTTTGCTAGGGCAAAATATATTGACATGTTAAAGGGAGATTTTCTGTTCGAGAGGGGGTTTAGTGGTGATCTTCCGCACTTTTTAA
GAGCAGGCATCACGAACCATGGTTGGGAGTTGTTCTGTTCCAAGCCAGAACCCGTGAACTTGCAGAGGCTGCTTCCAACAACTCATGACTCCACGGTCTCTCGGGAAAGA
GTTCTTTTGGCTTTTGCAATTCTATGGTCTCTTAGCATCGACGTGGGTAAAATTATTGCGGGTGAAATTTTTGGATGTTGGCATAAGAAGGTTGGGAAATTGTTCTTTCC
AAATACAATCTCAATGCTTTGTAAGAGAGTAGGGGTTCCAGAAAGCGCAGAAGATGTGATTCTACTACATAAGGGAATAATTGACTCGCCTAACTTGGCACGACTTCAGC
GGACACAGGAAGCACGCCAAGGGGGGCTAGTCTGTGGCATTCACCAGATCTTAGAACAACTCACACTTTCAGCCAACAGACAAGAGTTCGGTGAAAGGCAAGCCCAAACC
TTCTGGACTTATGTTAGAAGACGTGATGCTGCATTAAGGAAGGCACTTCAAGCTAGCTTTTCAAAGCCCTACCCAACCCTTCCTGTATTCCCAGATGATTTGTTGAACCC
TTGGATCCCACCACCACCTGTTGAGAGAGAAAAGGAAGATGATGATGCTGGTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MYLLRLKVIEDIAEEVVAEEEPKDYEKEKDPEKIVETEQESQEKAATDLQEQGNNEIVVQAVLEEIVQDPSRRRRCKQKAGWIKRIRTDTPSPPSTESEKEEPENQEEAE
KEAAEGETEKKTHEDKGKCIIGAEVEVEVARPEEQRLLYQRFVNDFARAKYIDMLKGDFLFERGFSGDLPHFLRAGITNHGWELFCSKPEPVNLQRLLPTTHDSTVSRER
VLLAFAILWSLSIDVGKIIAGEIFGCWHKKVGKLFFPNTISMLCKRVGVPESAEDVILLHKGIIDSPNLARLQRTQEARQGGLVCGIHQILEQLTLSANRQEFGERQAQT
FWTYVRRRDAALRKALQASFSKPYPTLPVFPDDLLNPWIPPPPVEREKEDDDAGQED