; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023176 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023176
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionS-protein homolog
Genome locationscaffold13:13252184..13257709
RNA-Seq ExpressionSpg023176
SyntenySpg023176
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]1.0e-2260.49Show/hide
Query:  VMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQ
        V++V G+YSW FKEN+ QTTLFWC F S  GHA+FEVFWPE G WL  RC    C WAA   GF L NIP  K EF+H W+
Subjt:  VMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQ

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]6.7e-2756.48Show/hide
Query:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLN
        + NY  N +      SK +D+ VH    +   G +YSW FKEN LQTT FWC FQS+ GHA+FEVFWPE G+WLSDRCS+S C+W A   GFSLLN P  
Subjt:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLN

Query:  KLEFLHPW
         LEF HPW
Subjt:  KLEFLHPW

XP_011656368.1 S-protein homolog 1 [Cucumis sativus]1.8e-2455.05Show/hide
Query:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRC-SDSVCIWAADTKGFSLLNIPL
        + NY  N +      SK +D+ VH    +   G  YSW FKEN LQTT +WC FQSK GHA+FEVFWPE G+W SDRC S+S C+W A   GFSLLN P 
Subjt:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRC-SDSVCIWAADTKGFSLLNIPL

Query:  NKLEFLHPW
          LEF HPW
Subjt:  NKLEFLHPW

XP_023520951.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.0e-1954.88Show/hide
Query:  HVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQ
        HV+  GG Y+W FKENLLQTTLFWC F SK G AT +VFWPE  SWL+D+C    CIW A  +G SL   P N    ++ W+
Subjt:  HVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQ

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]5.5e-2960.58Show/hide
Query:  LNYSKLNDVIVH-------PSVHVMEVGGK-YSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEF
        +NY K   + VH         VHV++  G+ Y+W FKEN LQTT FWC FQS+ GHA+FEVFWPE+G+WLSDRC DS C+W AD KGFSLLNIP   LEF
Subjt:  LNYSKLNDVIVH-------PSVHVMEVGGK-YSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEF

Query:  LHPW
         HPW
Subjt:  LHPW

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog8.8e-2555.05Show/hide
Query:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRC-SDSVCIWAADTKGFSLLNIPL
        + NY  N +      SK +D+ VH    +   G  YSW FKEN LQTT +WC FQSK GHA+FEVFWPE G+W SDRC S+S C+W A   GFSLLN P 
Subjt:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRC-SDSVCIWAADTKGFSLLNIPL

Query:  NKLEFLHPW
          LEF HPW
Subjt:  NKLEFLHPW

A0A1S3C8Z6 S-protein homolog3.2e-2756.48Show/hide
Query:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLN
        + NY  N +      SK +D+ VH    +   G +YSW FKEN LQTT FWC FQS+ GHA+FEVFWPE G+WLSDRCS+S C+W A   GFSLLN P  
Subjt:  VSNYSSNLNY-----SKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLN

Query:  KLEFLHPW
         LEF HPW
Subjt:  KLEFLHPW

A0A6J1C659 S-protein homolog2.1e-1851.81Show/hide
Query:  HVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAA-DTKGFSLLNIPLNKLEFLHPWQ
        HV+E  G+Y W+FKEN  QTTLFWC F+S +GHA+ EVFWPE   WL+ RC  S CIW A   +G  L ++P    E  + WQ
Subjt:  HVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAA-DTKGFSLLNIPLNKLEFLHPWQ

A0A6J1GSD6 S-protein homolog2.1e-1850Show/hide
Query:  HVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQ
        HV++ G KY W+F EN+LQTTL+WC F SK G A+ +VFWPE   WLSDRC+ + CIW A   G S+        E ++PW+
Subjt:  HVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQ

A0A6J1GSZ3 S-protein homolog2.7e-1840.17Show/hide
Query:  LITAFKNCWDSFVVSNYSSNLNYSKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGF
        LI  F N W+  +V++   +   +           HV++ G KY W+F EN+LQTTL+WC F SK G A+ +VFWPE   WLSDRC+ + CIW A   G 
Subjt:  LITAFKNCWDSFVVSNYSSNLNYSKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGF

Query:  SLLNIPLNKLEFLHPWQ
        S+        E ++PW+
Subjt:  SLLNIPLNKLEFLHPWQ

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 14.2e-0836.36Show/hide
Query:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG
        ++SW F EN+L +T FWC      GH    VFW +    L  RC    CIW A T G  L N    +      W+ G
Subjt:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG

Q2HQ46 S-protein homolog 741.9e-0835.06Show/hide
Query:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG
        ++SW F EN+L +TLFWC      GH   +VFW +    L  RC    C+W A   G  L N  + +      W+ G
Subjt:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 13.0e-0936.36Show/hide
Query:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG
        ++SW F EN+L +T FWC      GH    VFW +    L  RC    CIW A T G  L N    +      W+ G
Subjt:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG

AT4G29035.1 Plant self-incompatibility protein S1 family1.4e-0935.06Show/hide
Query:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG
        ++SW F EN+L +TLFWC      GH   +VFW +    L  RC    C+W A   G  L N  + +      W+ G
Subjt:  KYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAAGGAGCTGACGAGGACAACCCGACACGAGTCCAGAAATAGGGCCGAAGGATGGACCCTGGAGGCGAAATGGGCCAAGGGGTTGGGCCAAGACCGAAAGGATCG
GGCTTTTGGCCCGACCCCCGGCCCGCTTGCGCGGGCCGAGTTCGTCCGACTCTGTTCGGTCCCAGCAGCCTCTAGCCGCCCCGATTCTGCCTGGTTCGTCCCGAAACGCC
TCCGAATTCCTAAAAACCCTAGGAGTATGAGCAGGTATTTAAACCCCTCTTCGCCACTGAAGAATGGATCCCGAATACGATTCTCTACTCTCTCCTCTTACTCTCTTGCT
CTCCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGCTAGAAACACACCGGTGTGCAGGTTTTTTGTCTTGCAGGCCACGTCTTCCCCCTCTCAAACAAATTTACC
GTTGGTGGCACGTGAAGTAGCAATGCTAGTATCACACGACATTTCTTCCTTAAGAATACGAATCAAGGATAGGGAATCAGACAAGCTCGTCACACATACCACATTCAGCT
CTTTGGCCATCCTAAGACCTTCTAACATAGTTGCTGCCTCCACACATAATGTATTGGTACATATATTAGAGGACTTGCTCATCACAGCTTTCAAAAATTGTTGGGACTCG
TTTGTCGTATCCAACTATTCCTCGAATCTCAACTATTCAAAGTTGAACGATGTAATTGTGCATCCAAGTGTGCACGTTATGGAAGTTGGAGGGAAATACAGCTGGGAGTT
CAAGGAGAATCTTTTGCAAACGACATTGTTTTGGTGCACATTTCAGAGCAAATTTGGACATGCTACATTCGAAGTATTCTGGCCAGAAAACGGATCTTGGCTTTCAGATC
GATGCAGTGATAGTGTCTGCATTTGGGCTGCAGATACTAAGGGTTTTTCATTGCTTAATATTCCTCTAAACAAACTCGAGTTCCTGCACCCATGGCAACCTGGTAGTTCT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTACAAGGAGCTGACGAGGACAACCCGACACGAGTCCAGAAATAGGGCCGAAGGATGGACCCTGGAGGCGAAATGGGCCAAGGGGTTGGGCCAAGACCGAAAGGATCG
GGCTTTTGGCCCGACCCCCGGCCCGCTTGCGCGGGCCGAGTTCGTCCGACTCTGTTCGGTCCCAGCAGCCTCTAGCCGCCCCGATTCTGCCTGGTTCGTCCCGAAACGCC
TCCGAATTCCTAAAAACCCTAGGAGTATGAGCAGGTATTTAAACCCCTCTTCGCCACTGAAGAATGGATCCCGAATACGATTCTCTACTCTCTCCTCTTACTCTCTTGCT
CTCCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGCTAGAAACACACCGGTGTGCAGGTTTTTTGTCTTGCAGGCCACGTCTTCCCCCTCTCAAACAAATTTACC
GTTGGTGGCACGTGAAGTAGCAATGCTAGTATCACACGACATTTCTTCCTTAAGAATACGAATCAAGGATAGGGAATCAGACAAGCTCGTCACACATACCACATTCAGCT
CTTTGGCCATCCTAAGACCTTCTAACATAGTTGCTGCCTCCACACATAATGTATTGGTACATATATTAGAGGACTTGCTCATCACAGCTTTCAAAAATTGTTGGGACTCG
TTTGTCGTATCCAACTATTCCTCGAATCTCAACTATTCAAAGTTGAACGATGTAATTGTGCATCCAAGTGTGCACGTTATGGAAGTTGGAGGGAAATACAGCTGGGAGTT
CAAGGAGAATCTTTTGCAAACGACATTGTTTTGGTGCACATTTCAGAGCAAATTTGGACATGCTACATTCGAAGTATTCTGGCCAGAAAACGGATCTTGGCTTTCAGATC
GATGCAGTGATAGTGTCTGCATTTGGGCTGCAGATACTAAGGGTTTTTCATTGCTTAATATTCCTCTAAACAAACTCGAGTTCCTGCACCCATGGCAACCTGGTAGTTCT
TAG
Protein sequenceShow/hide protein sequence
MYKELTRTTRHESRNRAEGWTLEAKWAKGLGQDRKDRAFGPTPGPLARAEFVRLCSVPAASSRPDSAWFVPKRLRIPKNPRSMSRYLNPSSPLKNGSRIRFSTLSSYSLA
LLPFSDLSIRGGVARNTPVCRFFVLQATSSPSQTNLPLVAREVAMLVSHDISSLRIRIKDRESDKLVTHTTFSSLAILRPSNIVAASTHNVLVHILEDLLITAFKNCWDS
FVVSNYSSNLNYSKLNDVIVHPSVHVMEVGGKYSWEFKENLLQTTLFWCTFQSKFGHATFEVFWPENGSWLSDRCSDSVCIWAADTKGFSLLNIPLNKLEFLHPWQPGSS