; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023227 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023227
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionC2H2-type domain-containing protein
Genome locationscaffold13:3904390..3904881
RNA-Seq ExpressionSpg023227
SyntenySpg023227
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593853.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4766.47Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLD
        MES SL+M SPQE+LR+ +              K NNTR D +EEE       +GF W SSRAY+C FCKR+FRSAQALGGHMNVHRRDRAKLRRSPPLD
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLD

Query:  STHYGHDFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
        S H    FHGSSSQPIKFLKL DFS  +  GEEE+DG CKIWK VKKFV KE   LG SNEIDLELRLGF
Subjt:  STHYGHDFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

XP_008465205.1 PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo]2.4e-4968.71Show/hide
Query:  EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST---HYGHDFH
        +ELRII+  KMKPQ KAKAS KH+N R  ++EEE       + F W SSRAYTC FCKRQF+SAQALGGHMNVHRRDRAKLRRS PLDS     + HDF 
Subjt:  EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST---HYGHDFH

Query:  GSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLGGSNEIDLELRLGF
        GSSSQPIKFLKL DFS F+    +++SDGGCKIWKKV KFV  KET LL  SN+IDLELRLGF
Subjt:  GSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLGGSNEIDLELRLGF

XP_011650145.1 zinc finger protein 3 [Cucumis sativus]2.8e-5066.11Show/hide
Query:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN-----IGFLWLSSRA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR
        MESN+   + MS      +ELRII+  KMKPQ KAKAS KHNN R   +EEE      + F W SSRA YTC FCKRQF+SAQALGGHMNVHRRDRAKLR
Subjt:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN-----IGFLWLSSRA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR

Query:  RSPPLDST---HYGHDFHGSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
        RS PLDS     + HDFHGSSSQPIKFLKL DFS F+    +++SDGGC+IWKKV KFV KET LL  SN+IDLELRLGF
Subjt:  RSPPLDST---HYGHDFHGSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

XP_023514445.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo]4.9e-4767.86Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN----IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST
        MES SL+M SPQE+LRI +              K NNTR D +EEE     +GF W SSRAY+C FCKRQFRSAQALGGHMNVHRRDRAKLRRSPPL S 
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN----IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST

Query:  HYGHDFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
        H    FHGSSSQPIKFLKL DFS     GEEE+DG CKIWK VKKFV KE   LG SNEIDLELRLGF
Subjt:  HYGHDFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

XP_038875029.1 transcriptional regulator TAC1-like [Benincasa hispida]5.8e-5676.25Show/hide
Query:  SPQEELRIISNSKMKPQPKAKASFKHNNTR-RDQEEEEN---IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDS-THYGHDFHG
        SPQEELRII+ SKMKPQP AKAS K+N+TR R+QEEEE    +GF W SSRAYTC FCKR+F+SAQALGGHMNVHRRDRAKLRR+P LDS TH  HDFHG
Subjt:  SPQEELRIISNSKMKPQPKAKASFKHNNTR-RDQEEEEN---IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDS-THYGHDFHG

Query:  SSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
        SSSQPIKFLKL DFS F +G E+ESDGGCKIWKKV KFV  E  LL  SN+IDLEL+LGF
Subjt:  SSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

TrEMBL top hitse value%identityAlignment
A0A0A0LNQ1 C2H2-type domain-containing protein1.3e-5066.11Show/hide
Query:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN-----IGFLWLSSRA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR
        MESN+   + MS      +ELRII+  KMKPQ KAKAS KHNN R   +EEE      + F W SSRA YTC FCKRQF+SAQALGGHMNVHRRDRAKLR
Subjt:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN-----IGFLWLSSRA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR

Query:  RSPPLDST---HYGHDFHGSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
        RS PLDS     + HDFHGSSSQPIKFLKL DFS F+    +++SDGGC+IWKKV KFV KET LL  SN+IDLELRLGF
Subjt:  RSPPLDST---HYGHDFHGSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

A0A1S3CPU8 transcriptional regulator SUPERMAN1.1e-4968.71Show/hide
Query:  EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST---HYGHDFH
        +ELRII+  KMKPQ KAKAS KH+N R  ++EEE       + F W SSRAYTC FCKRQF+SAQALGGHMNVHRRDRAKLRRS PLDS     + HDF 
Subjt:  EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST---HYGHDFH

Query:  GSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLGGSNEIDLELRLGF
        GSSSQPIKFLKL DFS F+    +++SDGGCKIWKKV KFV  KET LL  SN+IDLELRLGF
Subjt:  GSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLGGSNEIDLELRLGF

A0A5D3CAK0 Transcriptional regulator SUPERMAN1.1e-4968.71Show/hide
Query:  EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST---HYGHDFH
        +ELRII+  KMKPQ KAKAS KH+N R  ++EEE       + F W SSRAYTC FCKRQF+SAQALGGHMNVHRRDRAKLRRS PLDS     + HDF 
Subjt:  EELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDST---HYGHDFH

Query:  GSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLGGSNEIDLELRLGF
        GSSSQPIKFLKL DFS F+    +++SDGGCKIWKKV KFV  KET LL  SN+IDLELRLGF
Subjt:  GSSSQPIKFLKLCDFSRFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLGGSNEIDLELRLGF

A0A6J1EUL3 zinc finger protein 10-like5.3e-4766.47Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLD
        MES SL+M SPQE+LR+ +              K NNTR D +EEE       +GF W SSRAY+C FCKR+FRSAQALGGHMNVHRRDRAKLRRSPPLD
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEEN------IGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLD

Query:  STHYGHDFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
        S H    FHGSSSQPIKFLKL DFS  +  GEEE+DG CKIWK VKKFV KE   LG SNEIDLELRLGF
Subjt:  STHYGHDFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

A0A6J1KIV9 transcriptional regulator SUPERMAN-like3.4e-4666.46Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDSTHYGH
        ME+ SL+M SPQEELRI +        K K +   +    ++EEE+ +GF W SSRAY+C FCKR+FRSAQALGGHMNVHRRDRAKLRRSPPL S H   
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDSTHYGH

Query:  DFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF
         FHGSSSQPIKFLKL DFS  +  GEEE DG CKIWK VKKFV KE   LG SNEIDLELRLGF
Subjt:  DFHGSSSQPIKFLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 102.0e-1165.96Show/hide
Query:  EEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRS
        E++  G LW   R+YTCSFC+R+F+SAQALGGHMNVHRRDRA+L+++
Subjt:  EEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRS

Q38895 Transcriptional regulator SUPERMAN2.2e-1351.28Show/hide
Query:  QEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSTHYGHDFHGSSSQP
        Q+ +  +GF W   R+YTCSFCKR+FRSAQALGGHMNVHRRDRA+LR           SPP  + +Y +    +S  P
Subjt:  QEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSTHYGHDFHGSSSQP

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.4e-0968.29Show/hide
Query:  GFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR
        G +W   R+Y+CSFC R+F+SAQALGGHMNVHRRDRA+L++
Subjt:  GFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR

Q9SLB8 Zinc finger protein 115.9e-1147.37Show/hide
Query:  ASFKHNNTRRDQEEEE---------------NIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSP
        ASF + +  +++E E+                 G +    + YTCSFC+R+FRSAQALGGHMNVHRRDRAKLR+ P
Subjt:  ASFKHNNTRRDQEEEE---------------NIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSP

Q9SR34 Transcriptional regulator TAC19.4e-0977.14Show/hide
Query:  SRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR
        SR+Y CSFC R F +AQALGGHMN+HRRDRAKLR+
Subjt:  SRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 101.4e-1265.96Show/hide
Query:  EEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRS
        E++  G LW   R+YTCSFC+R+F+SAQALGGHMNVHRRDRA+L+++
Subjt:  EEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRS

AT2G42410.1 zinc finger protein 114.2e-1247.37Show/hide
Query:  ASFKHNNTRRDQEEEE---------------NIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSP
        ASF + +  +++E E+                 G +    + YTCSFC+R+FRSAQALGGHMNVHRRDRAKLR+ P
Subjt:  ASFKHNNTRRDQEEEE---------------NIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSP

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-1451.28Show/hide
Query:  QEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSTHYGHDFHGSSSQP
        Q+ +  +GF W   R+YTCSFCKR+FRSAQALGGHMNVHRRDRA+LR           SPP  + +Y +    +S  P
Subjt:  QEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSTHYGHDFHGSSSQP

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein2.1e-1162.5Show/hide
Query:  DQEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR
        +Q+ + NI       R+YTC+FC+R+FRSAQALGGHMNVHRRDRA  R
Subjt:  DQEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein1.0e-1068.29Show/hide
Query:  GFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR
        G +W   R+Y+CSFC R+F+SAQALGGHMNVHRRDRA+L++
Subjt:  GFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACAC
AAGAAGGGATCAAGAAGAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAAGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCAGCACAAGCTCTCGGCG
GTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGAAGATCTCCTCCATTGGATTCAACTCATTATGGTCATGATTTTCATGGATCCTCATCTCAACCCATTAAG
TTTCTCAAACTGTGTGATTTCTCAAGGTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGACTGG
TTTGCTTGGTGGTTCAAATGAGATAGATTTGGAGCTTAGATTAGGGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACAC
AAGAAGGGATCAAGAAGAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAAGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCAGCACAAGCTCTCGGCG
GTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGAAGATCTCCTCCATTGGATTCAACTCATTATGGTCATGATTTTCATGGATCCTCATCTCAACCCATTAAG
TTTCTCAAACTGTGTGATTTCTCAAGGTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGACTGG
TTTGCTTGGTGGTTCAAATGAGATAGATTTGGAGCTTAGATTAGGGTTCTAG
Protein sequenceShow/hide protein sequence
MESNSLRMSPQEELRIISNSKMKPQPKAKASFKHNNTRRDQEEEENIGFLWLSSRAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRSPPLDSTHYGHDFHGSSSQPIK
FLKLCDFSRFNNGGEEESDGGCKIWKKVKKFVNKETGLLGGSNEIDLELRLGF