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Spg023309 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023309
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-conjugating enzyme E2 34-like
Genome locationscaffold13:859754..861062
RNA-Seq ExpressionSpg023309
SyntenySpg023309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606678.1 hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5980.79Show/hide
Query:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI
        MDD   DDFDPR NFSKFLEEAKHHAKEEDFKA  +E+TGRKWL AQ KKSKKSWKNTLFSWL + K S SLPK E N H SNKRRVHVSGPI TG T +
Subjt:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI

Query:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        D RPR RPTSGPI SLFNPSMRTEMEIPYMCLHQLTSP  NH YGPIYLVT
Subjt:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]1.0e-6077.44Show/hide
Query:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETN-PHASNKRRV
        M K VSPDLEMDD   D+FDPRL+FSKFLEEAKHHA  +DFKA K  EE+ GRKWL  QEKKSKKSWK T+FSWLK+ KKS  LPKPE N PH S+KR V
Subjt:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETN-PHASNKRRV

Query:  HVSGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        HVSGPI TG    D RPRRRPTSGPI SLFNPSMRTEMEIPYMCLHQLTSPN++HNYGPIYLVT
Subjt:  HVSGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

XP_022949073.1 uncharacterized protein LOC111452535 [Cucurbita moschata]3.6e-5880.13Show/hide
Query:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI
        MDD   DDFDPR NFSKFLEEAKHHAKEEDFKA  +E+TGRKWL AQ KKSKKSWKNTLFSWL + K S SLPK E N H SNKRRVHVSG I TG T +
Subjt:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI

Query:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        D RPR RPTSGPI SLFNPSMRTEMEIPYMCLHQLTSP  NH YGPIYLVT
Subjt:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

XP_022998123.1 uncharacterized protein LOC111492863 [Cucurbita maxima]8.8e-5778.81Show/hide
Query:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI
        MDD   DDFDPR NFSKFLEEAKHHAKEEDFKA  +E+TGRKWL AQ+KKSKKSWKNTLFSWL   K S S PK +   H SNKR VHVSGPI TG T I
Subjt:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI

Query:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        D RPR RPTSGPI SLFNPSMRTEMEIPYMCLHQLTSP  NH YGPIYLVT
Subjt:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

XP_038895377.1 uncharacterized protein LOC120083617 [Benincasa hispida]9.4e-5975.16Show/hide
Query:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVS
        M K VSPD EMDD   DD D  LNFSKFL+EAK HA E+DFKA  EE+TGRKWL AQEKKSKKSWKNTLFSWLK+ KK+  +PKPE NPH  NKRRVHVS
Subjt:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVS

Query:  GPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        GPI TG T  D RPRR P SGPI SLFNPSMRT+MEIPYM LHQL +PN+NH YGPIYLVT
Subjt:  GPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein1.2e-5673.46Show/hide
Query:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHV
        MKK +S D EM++   DDFD  LNFSKFLEEAKHHA ++ FKA   EE+T RKWL AQEKK+KKSWKNTLFSWLK+ KKS SLPKPE NPH  NKRRV+V
Subjt:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHV

Query:  SGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        SGPI +    ID RPRRRP SGPI SLFNP+MRTE EIPYMCLHQL++PNTN NYGPIYLVT
Subjt:  SGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

A0A5D3D6L0 Uncharacterized protein6.4e-5370.99Show/hide
Query:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHV
        MKK  S D EM+++  DDFD  LNFS FLEEAKHHA  +  KA   EE+TGRK L AQEKK+KKSWKNTLFSWLK+ KKS SLPKPE NPH  NKRRV+V
Subjt:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK-EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHV

Query:  SGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        SGP+ +  T  + RPRRRP SGPI SLFNPSMRTE EIPYMCL QL++PN+NHNYGPIYLVT
Subjt:  SGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203024.9e-6177.44Show/hide
Query:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETN-PHASNKRRV
        M K VSPDLEMDD   D+FDPRL+FSKFLEEAKHHA  +DFKA K  EE+ GRKWL  QEKKSKKSWK T+FSWLK+ KKS  LPKPE N PH S+KR V
Subjt:  MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALK--EEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETN-PHASNKRRV

Query:  HVSGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        HVSGPI TG    D RPRRRPTSGPI SLFNPSMRTEMEIPYMCLHQLTSPN++HNYGPIYLVT
Subjt:  HVSGPILTGTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

A0A6J1GB15 uncharacterized protein LOC1114525351.7e-5880.13Show/hide
Query:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI
        MDD   DDFDPR NFSKFLEEAKHHAKEEDFKA  +E+TGRKWL AQ KKSKKSWKNTLFSWL + K S SLPK E N H SNKRRVHVSG I TG T +
Subjt:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI

Query:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        D RPR RPTSGPI SLFNPSMRTEMEIPYMCLHQLTSP  NH YGPIYLVT
Subjt:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

A0A6J1KFX5 uncharacterized protein LOC1114928634.3e-5778.81Show/hide
Query:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI
        MDD   DDFDPR NFSKFLEEAKHHAKEEDFKA  +E+TGRKWL AQ+KKSKKSWKNTLFSWL   K S S PK +   H SNKR VHVSGPI TG T I
Subjt:  MDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILTGTTAI

Query:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT
        D RPR RPTSGPI SLFNPSMRTEMEIPYMCLHQLTSP  NH YGPIYLVT
Subjt:  DDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACCTGTTTCTCCTGATCTTGAGATGGATGATTCTTCTCTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCAT
GCCAAAGAAGAAGACTTCAAGGCCTTGAAAGAAGAACAAACAGGAAGGAAATGGTTGGCAGCACAAGAGAAAAAAAGCAAGAAATCATGGAAAAACACACTCTTC
TCCTGGTTGAAAACTCACAAAAAGAGCAACTCTCTCCCCAAACCAGAAACAAATCCTCACGCATCCAATAAAAGACGCGTTCATGTCTCTGGTCCGATTCTCACC
GGAACTACGGCCATCGATGACAGACCCCGACGCCGTCCCACGTCTGGACCGATCCCCAGTCTCTTCAATCCGAGTATGCGAACCGAGATGGAGATCCCTTACATG
TGTCTCCACCAGCTTACTAGCCCCAATACTAATCACAATTATGGTCCAATCTATCTTGTTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAACCTGTTTCTCCTGATCTTGAGATGGATGATTCTTCTCTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCAT
GCCAAAGAAGAAGACTTCAAGGCCTTGAAAGAAGAACAAACAGGAAGGAAATGGTTGGCAGCACAAGAGAAAAAAAGCAAGAAATCATGGAAAAACACACTCTTC
TCCTGGTTGAAAACTCACAAAAAGAGCAACTCTCTCCCCAAACCAGAAACAAATCCTCACGCATCCAATAAAAGACGCGTTCATGTCTCTGGTCCGATTCTCACC
GGAACTACGGCCATCGATGACAGACCCCGACGCCGTCCCACGTCTGGACCGATCCCCAGTCTCTTCAATCCGAGTATGCGAACCGAGATGGAGATCCCTTACATG
TGTCTCCACCAGCTTACTAGCCCCAATACTAATCACAATTATGGTCCAATCTATCTTGTTACATAG
Protein sequenceShow/hide protein sequence
MKKPVSPDLEMDDSSLDDFDPRLNFSKFLEEAKHHAKEEDFKALKEEQTGRKWLAAQEKKSKKSWKNTLFSWLKTHKKSNSLPKPETNPHASNKRRVHVSGPILT
GTTAIDDRPRRRPTSGPIPSLFNPSMRTEMEIPYMCLHQLTSPNTNHNYGPIYLVT