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Spg023347 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023347
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA transcription factor 16-like
Genome locationscaffold13:7006046..7006365
RNA-Seq ExpressionSpg023347
SyntenySpg023347
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150081.1 GATA transcription factor 16 [Cucumis sativus]8.5e-1471.43Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

XP_008458384.1 PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo]8.5e-1471.43Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

XP_022138518.1 GATA transcription factor 16-like [Momordica charantia]6.5e-1468.18Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAG+S   +SPAESEQN+KTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

XP_023548663.1 GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]1.9e-1369.7Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDA  S   SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

XP_038875288.1 GATA transcription factor 16-like [Benincasa hispida]1.0e-1474.6Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAGK SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

TrEMBL top hitse value%identityAlignment
A0A0A0KG76 GATA-type domain-containing protein4.1e-1471.43Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

A0A1S3C8C2 GATA transcription factor 16-like isoform X14.1e-1471.43Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

A0A5D3BXI1 GATA transcription factor 16-like isoform X14.1e-1471.43Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAGK +SP ESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

A0A6J1CD73 GATA transcription factor 16-like3.1e-1468.18Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDPIE+              GSEFKDAG+S   +SPAESEQN+KTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

A0A6J1KXU7 GATA transcription factor 16-like2.0e-1368.18Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        MMDP+E+              GSEFKDA  S   SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKS---SSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 216.3e-0472.73Show/hide
Query:  KTCADCGTTKTPLWRGGPAGPK
        + C+DC TTKTPLWR GP GPK
Subjt:  KTCADCGTTKTPLWRGGPAGPK

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 14.9e-0472.73Show/hide
Query:  KTCADCGTTKTPLWRGGPAGPK
        + C+DC TTKTPLWR GP GPK
Subjt:  KTCADCGTTKTPLWRGGPAGPK

Q8LG10 GATA transcription factor 158.0e-0748.44Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQN-KKTCADCGTTKTPLWRGGPAGPK
        M+DP E V D       +++   +  +   SSS  E+  N KK+CA CGT+KTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQN-KKTCADCGTTKTPLWRGGPAGPK

Q9FJ10 GATA transcription factor 168.0e-0791.3Show/hide
Query:  KKTCADCGTTKTPLWRGGPAGPK
        KKTCADCGT+KTPLWRGGP GPK
Subjt:  KKTCADCGTTKTPLWRGGPAGPK

Q9LIB5 GATA transcription factor 173.0e-0663.64Show/hide
Query:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        S   + S   K+TC DCGT +TPLWRGGPAGPK
Subjt:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 155.7e-0848.44Show/hide
Query:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQN-KKTCADCGTTKTPLWRGGPAGPK
        M+DP E V D       +++   +  +   SSS  E+  N KK+CA CGT+KTPLWRGGPAGPK
Subjt:  MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQN-KKTCADCGTTKTPLWRGGPAGPK

AT3G16870.1 GATA transcription factor 172.2e-0763.64Show/hide
Query:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        S   + S   K+TC DCGT +TPLWRGGPAGPK
Subjt:  SSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

AT4G16141.1 GATA type zinc finger transcription factor family protein6.7e-0964.86Show/hide
Query:  DAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK
        D G  SS       KKTC DCGT++TPLWRGGPAGPK
Subjt:  DAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPK

AT5G49300.1 GATA transcription factor 165.7e-0891.3Show/hide
Query:  KKTCADCGTTKTPLWRGGPAGPK
        KKTCADCGT+KTPLWRGGP GPK
Subjt:  KKTCADCGTTKTPLWRGGPAGPK

AT5G56860.1 GATA type zinc finger transcription factor family protein4.5e-0572.73Show/hide
Query:  KTCADCGTTKTPLWRGGPAGPK
        + C+DC TTKTPLWR GP GPK
Subjt:  KTCADCGTTKTPLWRGGPAGPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCCGATTGAGGATGTGAGTGATCTTCTTATTCGATTGTACTGTGCTCAAATGTGGGGATCGGAGTTCAAGGACGCCGGAAAGTCGTCGTCGCCGGCGGAAAG
TGAGCAGAATAAAAAGACCTGCGCCGATTGCGGCACGACGAAGACTCCTCTCTGGCGCGGAGGTCCGGCCGGCCCTAAGGTGATTTTTCATCTCCATCTCTCAACCTCGA
TCGAATATTCTGTTTTGTTCTCCATTTCTGTTGCTCGATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGATCCGATTGAGGATGTGAGTGATCTTCTTATTCGATTGTACTGTGCTCAAATGTGGGGATCGGAGTTCAAGGACGCCGGAAAGTCGTCGTCGCCGGCGGAAAG
TGAGCAGAATAAAAAGACCTGCGCCGATTGCGGCACGACGAAGACTCCTCTCTGGCGCGGAGGTCCGGCCGGCCCTAAGGTGATTTTTCATCTCCATCTCTCAACCTCGA
TCGAATATTCTGTTTTGTTCTCCATTTCTGTTGCTCGATTATAA
Protein sequenceShow/hide protein sequence
MMDPIEDVSDLLIRLYCAQMWGSEFKDAGKSSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKVIFHLHLSTSIEYSVLFSISVARL