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Spg023357 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023357
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Genome locationscaffold13:5770363..5780828
RNA-Seq ExpressionSpg023357
SyntenySpg023357
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008384 - Actin-related protein 2/3 complex subunit 4
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO88611.1 ARP2/3 complex, 20kDa subunit (P20-Arc) [Corchorus olitorius]3.0e-2092.86Show/hide
Query:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_008456149.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo]3.0e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_008457157.1 PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo]3.0e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_011649071.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]3.0e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

XP_011651239.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]3.0e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

TrEMBL top hitse value%identityAlignment
A0A0A0LHM5 Actin-related protein 2/3 complex subunit 41.4e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A1R3J1B1 ARP2/3 complex, 20kDa subunit (P20-Arc)1.4e-2092.86Show/hide
Query:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A1S3C2N8 Actin-related protein 2/3 complex subunit 41.4e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A1S3C5J1 Actin-related protein 2/3 complex subunit 41.4e-2090.16Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

A0A6J1H2P7 Actin-related protein 2/3 complex subunit 42.5e-2088.52Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTSSEL+LNPILICRNESEKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

SwissProt top hitse value%identityAlignment
F4JUL9 Actin-related protein 2/3 complex subunit 44.3e-2285.25Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

O96625 Actin-related protein 2/3 complex subunit 44.3e-1462.3Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+KTS EL+LNP++I RN++E+ LIETSINS+RIS+ +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

P59998 Actin-related protein 2/3 complex subunit 45.3e-1260.66Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ V
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

Q148J6 Actin-related protein 2/3 complex subunit 45.3e-1260.66Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ V
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

Q641G7 Actin-related protein 2/3 complex subunit 43.1e-1260.66Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NF  Q VERHNKPEVE+++S ELLL P++I RNE EK LIE SINS+R+S+ V
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

Arabidopsis top hitse value%identityAlignment
AT4G14147.1 protein binding3.1e-2385.25Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV

AT4G14147.2 protein binding3.1e-2385.25Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGGAGCTGGATACGGAGCGACCAT
CACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGAATTTTCCTTGCCAAGAAGTTG
AAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAGTGTTTGATCGAGACATCTATA
AATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGGAGCTGGATACGGAGCGACCAT
CACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGAATTTTCCTTGCCAAGAAGTTG
AAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAGTGTTTGATCGAGACATCTATA
AATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAA
Protein sequenceShow/hide protein sequence
MFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSI
NSLRISLKVILFSI