; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023377 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023377
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold13:5538572..5542936
RNA-Seq ExpressionSpg023377
SyntenySpg023377
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.8e-2240.44Show/hide
Query:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN
        P T++E +SRAQ+YMSA E   SKR                +   +RTD+  +   D  +G     R R  Q D  +KFEKYT T+VP EQ+LMEI+N  
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN

Query:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.6e-2542.62Show/hide
Query:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN
        P T++E +SRAQ+YMSA E   SKR             D K     RTD   +   D  +G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN

Query:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]6.6e-2541.8Show/hide
Query:  PRTYAEFVSRAQKYMSAEEL------LKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILM
        P T+AE +SRAQKYMSAEE       L+ KR++++ +R       SK +K+ R                        Q D  +KFEKYTPT+VP EQ+LM
Subjt:  PRTYAEFVSRAQKYMSAEEL------LKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILM

Query:  EIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        EI++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+    +A      P R++   D   P  EIR
Subjt:  EIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]5.2e-2240.98Show/hide
Query:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN
        P T++E +SRAQ+YMSA E   SKR             D K     RTD+  +   D  +G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN

Query:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+  + +A Q          G+    P  EIR
Subjt:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

XP_024024960.1 uncharacterized protein LOC112092617 [Morus notabilis]2.2e-2037.89Show/hide
Query:  QPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGD----YLKKFE---------KYTPTS
        QP+T+A+ V RAQK+++AEE ++++R +       S    SK D +++ +EG +G    G G+      + D         +KF+          YTP +
Subjt:  QPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGD----YLKKFE---------KYTPTS

Query:  VPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGG
            QILM+I++ NLL+ P  +K +P+ RDKS+YC FH+DHGH T +  QLK +IEALIQ G L+EF  +  A++R   PT    GK  G
Subjt:  VPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGG

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128058.6e-2340.44Show/hide
Query:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN
        P T++E +SRAQ+YMSA E   SKR                +   +RTD+  +   D  +G     R R  Q D  +KFEKYT T+VP EQ+LMEI+N  
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN

Query:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

A0A6J1DWY0 uncharacterized protein LOC1110252934.1e-2542.62Show/hide
Query:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN
        P T++E +SRAQ+YMSA E   SKR             D K     RTD   +   D  +G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN

Query:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+  + +A Q          G+    P  EIR
Subjt:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

A0A6J1DYL6 uncharacterized protein LOC1110257852.5e-2240.98Show/hide
Query:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN
        P T++E +SRAQ+YMSA E   SKR             D K     RTD+  +   D  +G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTN

Query:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+  + +A Q          G+    P  EIR
Subjt:  LLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

A0A6J1DZ52 uncharacterized protein LOC1110256123.2e-2541.8Show/hide
Query:  PRTYAEFVSRAQKYMSAEEL------LKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILM
        P T+AE +SRAQKYMSAEE       L+ KR++++ +R       SK +K+ R                        Q D  +KFEKYTPT+VP EQ+LM
Subjt:  PRTYAEFVSRAQKYMSAEEL------LKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILM

Query:  EIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR
        EI++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+    +A      P R++   D   P  EIR
Subjt:  EIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

A0A7N2LNH8 Ribonuclease H1.7e-1840.49Show/hide
Query:  SQPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRN
        + P+T +E + RA KYM+AE+ L S R +R  KR      DS++D+ ++    G  R D  R +P  GR           F  +TP + P +Q+LM+I++
Subjt:  SQPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRN

Query:  TNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQ
           L+ P KLKS+P  R + +YC FHRDHGH T +C  LK +IEALI+ G L++F  K   DQ
Subjt:  TNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTGGGTCACGTAGGTTCAAGAGACTCGACTACGGGATGTGACTGCTCTGCAGATCGATCATTCATTCGAGATGTGACTGCAAATGGGATGCAATTTTGG
ACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCTGGCTGGAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAG
GGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCTCCACAGCCTCTGGCTGCCCCGGTTTCGCCTGG
TTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAAC
TCTACTCTCTATTCTCTGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGTTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCG
GTGTGCAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGT
AAGGGTATGGAGAAGAAAGACCAAGACGTAAACATAGAGAATTCAGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAGCATCTGGGGGTCACCGAGA
CAAGCAGGCCGAGGCCGAGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTG
GATAAACCCGGCCCTAGCACCAAAGTCCATGAGGGGAGCTTGATTAGAAACCCGAGGAAGGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAGGGACGAGGTCA
AAAGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCCACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCGTCAC
TACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTAATCGTTGAGAAGGGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCC
GCCAAAGCTGAAGCCCGGGCTGCCGAGGCTGAGGCCAGAGCAGCCGAGGCCGAGGCTAGCCAACCTCGAACCTATGCGGAGTTCGTCTCCCGGGCACAGAAGTAT
ATGAGCGCAGAAGAGTTACTGAAGTCAAAGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGATAAAAGGCAGCGGACCGAC
GAGGGAGGCCAGGGCCGAGCAGACCATGGCCGAGGCCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGGGACTACTTGAAGAAATTTGAAAAGTACACCCCT
ACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTCCTCAGCGCACCCTGGAAGCTGAAGTCAAATCCTGACCACAGAGACAAAAGCCAG
TATTGTCTCTTCCATCGAGATCATGGACATTCGACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACC
GCAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCGACAAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTGGGTCACGTAGGTTCAAGAGACTCGACTACGGGATGTGACTGCTCTGCAGATCGATCATTCATTCGAGATGTGACTGCAAATGGGATGCAATTTTGG
ACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCTGGCTGGAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAG
GGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCTCCACAGCCTCTGGCTGCCCCGGTTTCGCCTGG
TTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAAC
TCTACTCTCTATTCTCTGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGTTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCG
GTGTGCAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGT
AAGGGTATGGAGAAGAAAGACCAAGACGTAAACATAGAGAATTCAGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAGCATCTGGGGGTCACCGAGA
CAAGCAGGCCGAGGCCGAGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTG
GATAAACCCGGCCCTAGCACCAAAGTCCATGAGGGGAGCTTGATTAGAAACCCGAGGAAGGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAGGGACGAGGTCA
AAAGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCCACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCGTCAC
TACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTAATCGTTGAGAAGGGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCC
GCCAAAGCTGAAGCCCGGGCTGCCGAGGCTGAGGCCAGAGCAGCCGAGGCCGAGGCTAGCCAACCTCGAACCTATGCGGAGTTCGTCTCCCGGGCACAGAAGTAT
ATGAGCGCAGAAGAGTTACTGAAGTCAAAGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGATAAAAGGCAGCGGACCGAC
GAGGGAGGCCAGGGCCGAGCAGACCATGGCCGAGGCCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGGGACTACTTGAAGAAATTTGAAAAGTACACCCCT
ACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTCCTCAGCGCACCCTGGAAGCTGAAGTCAAATCCTGACCACAGAGACAAAAGCCAG
TATTGTCTCTTCCATCGAGATCATGGACATTCGACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACC
GCAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCGACAAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA
Protein sequenceShow/hide protein sequence
MVLGHVGSRDSTTGCDCSADRSFIRDVTANGMQFWTTPIYKELTRTTGEKSGWKMDQGGKTGKWDGPRPKGSGFWPDPLLGPLARAEPVRSRLVSTASGCPGFAW
FDLKRLRIPKNPRRMSRYLYPSSPLKRGSRILSLNSTLYSLLSPLALTFPRPTVLFADLSIGAGVASTTPVCRSGEILWPKSTINSWRRLWGRKPVNLHIGYSMS
KGMEKKDQDVNIENSDGDRHQRRSRDDDSIWGSPRQAGRGRAEDADTKIAALEDEVKGMNRSLSRILQILDKPGPSTKVHEGSLIRNPRKGKEPMEHTAESGTRS
KGKKTDSMTSKVRGLKPTDRTILRSPESSTLKGRHYTVSTPSYGHTKTDLRNLIVEKGRSAKTAESEAKAAKAEARAAEAEARAAEAEASQPRTYAEFVSRAQKY
MSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQ
YCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR