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Spg023460 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023460
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function (DUF3245)
Genome locationscaffold13:10009635..10010313
RNA-Seq ExpressionSpg023460
SyntenySpg023460
Gene Ontology termsNA
InterPro domainsIPR021641 - Protein of unknown function DUF3245


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593666.1 Rop guanine nucleotide exchange factor 3, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3775.63Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDE-ESKTAIFDK
        AA+  S MT    K+  +DN+STVVEPENRPP LGLGAK+ SQFRNGPSNDPLDRKLYAKLDAGKKQAARK  ED PVLNNEDD+D++DE ESKTA+FDK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDE-ESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRA T VTMP L  KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

KAG7025998.1 hypothetical protein SDJN02_12496 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-3876.47Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDE-ESKTAIFDK
        AA+  S MT    K+  +DN+STVVEPENRPP LGLGAK+ SQFRNGPSNDPLDRKLYAKLDAGKKQAARK  ED PVLNNEDD+D++DE ESKTA+FDK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDE-ESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRA T VTMPPL  KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

XP_022959368.1 uncharacterized protein LOC111460361 [Cucurbita moschata]8.9e-3875.42Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKK
        AAQ  S MTK+  K+  +DNEST+ EP NRPP LGLGAK+    RNGPSNDP+DRKLYAKLDA KKQAARK SED PVLNNEDD+DDND+ES+TAIFDKK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKK

Query:  RAATPVTMPPLRAKKKRR
        RAAT V M PLRAKKKRR
Subjt:  RAATPVTMPPLRAKKKRR

XP_022964046.1 uncharacterized protein LOC111464189 [Cucurbita moschata]1.5e-3774.79Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK
        AA+  S MT    K+  +DN+STVVEPENRPP LGLGAK+ SQFRNGPSNDPLDRKLYAKLDAGKKQAARK  ED PV+NNEDD+D D++EES+TA+FDK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRA T VTMPPL  KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

XP_023514247.1 uncharacterized protein LOC111778569 isoform X1 [Cucurbita pepo subsp. pepo]6.8e-3875.63Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK
        AA+  S MT    K+  +DN+STVVEPENRPP LGLGAK+ SQFRNGPSNDPLDRKLYAKLDAGKKQAARK  ED PVLNNEDD+D D++EESKTA+FDK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRA T VTMPP   KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

TrEMBL top hitse value%identityAlignment
A0A5D3BV19 Putative RNA binding protein5.3e-3673.11Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDE-DDNDEESKTAIFDK
        AAQ  S MT S  K+   DNEST +EPE RPP LGLGAKV   FRNGPSNDPLDRKLYAKLDAGKKQAARK SE+ PVL+N+DD+ DD +EES+TAIF+K
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDE-DDNDEESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRAA PVTMPP + KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

A0A6J1DX89 uncharacterized protein LOC1110243384.8e-3772.03Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKK
        A QW +NMT       + ++E TVVEPENRPP LGLGAKV  QFR+GPSNDPLDRKLYAKLDAGK+QAARK  ED  +LNNEDDEDD++EES+TA+FDKK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKK

Query:  RAATPVTMPPLRAKKKRR
        RAATPV MPP R+KKK+R
Subjt:  RAATPVTMPPLRAKKKRR

A0A6J1H4P0 uncharacterized protein LOC1114603614.3e-3875.42Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKK
        AAQ  S MTK+  K+  +DNEST+ EP NRPP LGLGAK+    RNGPSNDP+DRKLYAKLDA KKQAARK SED PVLNNEDD+DDND+ES+TAIFDKK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKK

Query:  RAATPVTMPPLRAKKKRR
        RAAT V M PLRAKKKRR
Subjt:  RAATPVTMPPLRAKKKRR

A0A6J1HHS0 uncharacterized protein LOC1114641897.4e-3874.79Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK
        AA+  S MT    K+  +DN+STVVEPENRPP LGLGAK+ SQFRNGPSNDPLDRKLYAKLDAGKKQAARK  ED PV+NNEDD+D D++EES+TA+FDK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRA T VTMPPL  KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

A0A6J1KE33 uncharacterized protein LOC1114948433.7e-3774.79Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK
        AA+  S MT    K+  +DN+STVVEPENRPP LGLGAK+ SQFRNGPSNDPLDRKLYAKLDAGKKQAARK  ED  VLNNEDD+D D++EESKTA+FDK
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDED-DNDEESKTAIFDK

Query:  KRAATPVTMPPLRAKKKRR
        KRA T VTMPP   KKKRR
Subjt:  KRAATPVTMPPLRAKKKRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G61370.1 Protein of unknown function (DUF3245)1.3e-1039.62Show/hide
Query:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNN--EDDEDDNDEESKTAIFD
        A +W ++MT+ +      +++      E RP  LGLGA+V  Q +  PS+DPLD+KL AK  A K++ AR  +E A    N  +D EDD++ ESK+  F 
Subjt:  AAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNN--EDDEDDNDEESKTAIFD

Query:  KKRAAT
        KK+  T
Subjt:  KKRAAT

AT4G07940.1 Protein of unknown function (DUF3245)2.1e-0847.37Show/hide
Query:  LGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNN--EDDEDDNDEESKTAIF--DKKRAATP
        LGLGA+V  Q +  PS+DPLD+KL AK  AGK++ AR  +E A    N  +D+ED ++ ESK+  F   KK  +TP
Subjt:  LGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNN--EDDEDDNDEESKTAIF--DKKRAATP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCAGCGCAATGGACGAGCAATATGACAAAATCCAGTATGAAAAAATGTGTAGATGATAATGAATCGACCGTGGTAGAACCTGAGAATCGACCTCCAGGCCTTGG
ACTTGGAGCCAAAGTAAAAAGCCAGTTCAGGAATGGACCTTCTAATGACCCACTTGATAGAAAACTATATGCCAAGTTGGATGCTGGGAAAAAGCAAGCTGCCAGAAAGG
CGTCGGAGGATGCTCCCGTACTTAATAATGAAGATGATGAGGATGACAATGATGAAGAGAGTAAAACTGCCATCTTCGATAAGAAGCGAGCAGCAACTCCAGTAACTATG
CCTCCTTTGCGGGCCAAGAAAAAACGGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCAGCGCAATGGACGAGCAATATGACAAAATCCAGTATGAAAAAATGTGTAGATGATAATGAATCGACCGTGGTAGAACCTGAGAATCGACCTCCAGGCCTTGG
ACTTGGAGCCAAAGTAAAAAGCCAGTTCAGGAATGGACCTTCTAATGACCCACTTGATAGAAAACTATATGCCAAGTTGGATGCTGGGAAAAAGCAAGCTGCCAGAAAGG
CGTCGGAGGATGCTCCCGTACTTAATAATGAAGATGATGAGGATGACAATGATGAAGAGAGTAAAACTGCCATCTTCGATAAGAAGCGAGCAGCAACTCCAGTAACTATG
CCTCCTTTGCGGGCCAAGAAAAAACGGAGGTAA
Protein sequenceShow/hide protein sequence
MQAAQWTSNMTKSSMKKCVDDNESTVVEPENRPPGLGLGAKVKSQFRNGPSNDPLDRKLYAKLDAGKKQAARKASEDAPVLNNEDDEDDNDEESKTAIFDKKRAATPVTM
PPLRAKKKRR