CuGenDBv2

Gene ID	Spg023510
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	golgin candidate 3-like isoform X1
Genome location	scaffold13:12301915..12303960
RNA-Seq Expression	Spg023510
Synteny	Spg023510
Gene Ontology terms	GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0007030 - Golgi organization (biological process) GO:0005794 - Golgi apparatus (cellular component) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575201.1 Golgin candidate 4, partial [Cucurbita argyrosperma subsp. sororia]

7.6e-43

77.34

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSPIANGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

KAG7013764.1 Golgin candidate 4 [Cucurbita argyrosperma subsp. argyrosperma]

7.6e-43

77.34

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSPIANGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

XP_022959208.1 golgin candidate 3-like isoform X1 [Cucurbita moschata]

7.6e-43

77.34

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSPIANGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

XP_022959209.1 golgin candidate 3-like isoform X2 [Cucurbita moschata]

7.6e-43

77.34

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSPIANGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

XP_038874414.1 golgin candidate 4 [Benincasa hispida]

4.0e-44

78.12

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSP+ANGI+D  HSE                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
        AEIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D1I4 golgin candidate 3 isoform X2

2.0e-41

75.57

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGS---NGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIE
        MMWSSIANLKENLNKIALDVH+DDDE EF IYGS   NGGDG+VSVSDRRNSHS AHSN V RSPIANGIDDTRH+EV                     E
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGS---NGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIE

Query:  QYKAEIKRLQESERDIKSLSMNYAALLKEKE
        QYKAEIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  QYKAEIKRLQESERDIKSLSMNYAALLKEKE

A0A6J1H5A8 golgin candidate 3-like isoform X1

3.7e-43

77.34

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSPIANGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

A0A6J1H7B7 golgin candidate 3-like isoform X2

3.7e-43

77.34

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEFAIYGSNGGD +VSVSDRRNSHS AHSNPVTRSPIANGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

A0A6J1KW22 golgin candidate 4-like isoform X2

2.0e-41

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEF+IYGSN GD +VSVSDRRNSHS AHSNPVTRSPI NGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

A0A6J1KXY9 golgin candidate 4-like isoform X1

2.0e-41

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Query:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MMWSSIANLKENLNKIALDVH+DDDEEEF+IYGSN GD +VSVSDRRNSHS AHSNPVTRSPI NGI+D RH E                     IEQYK
Subjt:  MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
         EIKRLQESERDIKSLSMNYAALLKEKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

SwissProt top hits

e value

%identity

Alignment

Q84WU4 Golgin candidate 3

1.1e-20

51.56

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Query:  MWSSIANLKENLNKIALDVHYDDDEE-EFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MWSSI N+K NL+KI LDVH DD+EE +   YGS  G   VS SDRRNS        V+R  I+NGI+   H E                     IE+YK
Subjt:  MWSSIANLKENLNKIALDVHYDDDEE-EFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
        AEIK+LQESE DIK+LS+NYAALL+EKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

Q8VYU6 Golgin candidate 4

3.8e-21

50.39

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Query:  MWSSIANLKENLNKIALDVHYD--DDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQY
        MWSS+ANLKENLNKIA DVH D  DD+E+  IYGS  G      +DRRNS+   +S    RSP+ANG +   + E                     IE+Y
Subjt:  MWSSIANLKENLNKIALDVHYD--DDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQY

Query:  KAEIKRLQESERDIKSLSMNYAALLKEKE
        KAEI +LQ+SE +IK+LS+NYAALLKEKE
Subjt:  KAEIKRLQESERDIKSLSMNYAALLKEKE

Arabidopsis top hits

e value

%identity

Alignment

AT2G46180.1 golgin candidate 4

2.7e-22

50.39

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Query:  MWSSIANLKENLNKIALDVHYD--DDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQY
        MWSS+ANLKENLNKIA DVH D  DD+E+  IYGS  G      +DRRNS+   +S    RSP+ANG +   + E                     IE+Y
Subjt:  MWSSIANLKENLNKIALDVHYD--DDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQY

Query:  KAEIKRLQESERDIKSLSMNYAALLKEKE
        KAEI +LQ+SE +IK+LS+NYAALLKEKE
Subjt:  KAEIKRLQESERDIKSLSMNYAALLKEKE

AT3G61570.1 GRIP-related ARF-binding domain-containing protein 1

7.9e-22

51.56

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Query:  MWSSIANLKENLNKIALDVHYDDDEE-EFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK
        MWSSI N+K NL+KI LDVH DD+EE +   YGS  G   VS SDRRNS        V+R  I+NGI+   H E                     IE+YK
Subjt:  MWSSIANLKENLNKIALDVHYDDDEE-EFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYK

Query:  AEIKRLQESERDIKSLSMNYAALLKEKE
        AEIK+LQESE DIK+LS+NYAALL+EKE
Subjt:  AEIKRLQESERDIKSLSMNYAALLKEKE

Sequences

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CDS sequence

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ATGATGTGGAGCTCAATAGCTAATTTGAAAGAGAATTTGAATAAGATAGCTCTCGACGTGCACTACGACGATGACGAAGAGGAATTTGCGATCTATGGCTCCAATGGAGG
GGACGGAGAGGTTTCTGTGTCTGATCGGAGGAACTCGCATAGCCTTGCTCATTCGAATCCAGTGACGCGGTCTCCGATTGCGAATGGGATTGATGATACCCGTCACTCTG
AGGTTGGTTTTCGTAATAGCTACGCATTTCGGATAAGCTGGTGCTTTATGATTGTTGCTTACTCGATTGAACAATACAAAGCAGAAATTAAGAGGCTTCAGGAATCGGAG
AGGGATATTAAATCATTATCAATGAATTATGCAGCTTTGCTAAAGGAAAAAGAGGTATTCTAA

mRNA sequence

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Protein sequence

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MMWSSIANLKENLNKIALDVHYDDDEEEFAIYGSNGGDGEVSVSDRRNSHSLAHSNPVTRSPIANGIDDTRHSEVGFRNSYAFRISWCFMIVAYSIEQYKAEIKRLQESE
RDIKSLSMNYAALLKEKEVF

Spg023510 (gene) of Sponge gourd (cylindrica) v1 genome