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Spg023514 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023514
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein PXR1
Genome locationscaffold13:7884722..7885102
RNA-Seq ExpressionSpg023514
SyntenySpg023514
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040007.1 protein PXR1 [Cucumis melo var. makuwa]1.1e-3593.1Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+P+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

TYK24495.1 protein PXR1 [Cucumis melo var. makuwa]1.1e-3593.1Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+P+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

XP_004144999.1 uncharacterized protein LOC101205981 [Cucumis sativus]1.1e-3593.1Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFP+HEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISP+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

XP_016902506.1 PREDICTED: LOW QUALITY PROTEIN: protein PXR1 [Cucumis melo]5.6e-3591.95Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFPRHE IKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+P+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

XP_038907272.1 protein PXR1 [Benincasa hispida]3.0e-3692.05Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV
        +YQEAKKNK KK++TEEDLDFPRHEKIKFGDVVEAPLKL+AVPKAFKSAQVASQERKR QAINEYRNRKGWTSRPGIQIPSMTISP+V
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV

TrEMBL top hitse value%identityAlignment
A0A0A0KEN1 Uncharacterized protein5.5e-3693.1Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFP+HEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISP+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

A0A5A7TEP7 Protein PXR15.5e-3693.1Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+P+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

A0A5D3DLK4 Protein PXR15.5e-3693.1Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS
        +YQEAKKNK KK+KTEE LDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTI+P+
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPS

A0A6J1DLN3 DNA ligase 12.7e-3590.91Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV
        ++QEAKKNK KK KTEEDLDFPRHEKIKFGDVVEAPLKL+AVPKAFKSAQVASQERKRLQAINEYRNRK WTSRPGIQIPSM ISP+V
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV

A0A6J1H3V7 uncharacterized protein LOC1114602562.7e-3589.77Show/hide
Query:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV
        +Y EAKKNK KK KT+EDLDFPRHEKIKFGDVVEAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRKGWTSRPG+QIPSMTISP+V
Subjt:  RYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45520.1 unknown protein4.0e-2364.29Show/hide
Query:  RYQEAKKNKSKKSKTEEDL--DFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSM
        +Y EAKK K  K KTE+ L  +FP+HE+I+FGDVV+APLKL  VPKA KS   ASQER RLQAI+ YR+RKGWT+RPG+ IP++
Subjt:  RYQEAKKNKSKKSKTEEDL--DFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTACAATTATTTCTAAATAGATATCAGGAGGCAAAGAAAAATAAAAGTAAAAAATCCAAGACAGAGGAGGATCTAGATTTCCCAAGACATGAAAAAATCAAATT
TGGAGACGTGGTTGAAGCTCCACTGAAGTTGCTTGCAGTTCCGAAGGCATTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGGTTGCAGGCTATAAATGAATATA
GAAACCGCAAGGGATGGACCTCAAGGCCAGGGATACAAATACCTTCAATGACAATATCACCATCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTACAATTATTTCTAAATAGATATCAGGAGGCAAAGAAAAATAAAAGTAAAAAATCCAAGACAGAGGAGGATCTAGATTTCCCAAGACATGAAAAAATCAAATT
TGGAGACGTGGTTGAAGCTCCACTGAAGTTGCTTGCAGTTCCGAAGGCATTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGGTTGCAGGCTATAAATGAATATA
GAAACCGCAAGGGATGGACCTCAAGGCCAGGGATACAAATACCTTCAATGACAATATCACCATCTGTTTAA
Protein sequenceShow/hide protein sequence
MPLQLFLNRYQEAKKNKSKKSKTEEDLDFPRHEKIKFGDVVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPSV