; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023625 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023625
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionC2H2-type domain-containing protein
Genome locationscaffold13:4394729..4395322
RNA-Seq ExpressionSpg023625
SyntenySpg023625
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050710.1 hypothetical protein E6C27_scaffold560G00040 [Cucumis melo var. makuwa]1.2e-6065.17Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F    A+GT ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR   Q  Q  RFP GP FL   RATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLK
        P+RFS+PNS+GF+ AES+W N Q+SPF R+VFR+G PPP  PP  VGQY  N    +E  GDCT+PYINQLEKC+PKV  G EEDD RQLY  K+DLTLK
Subjt:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLK

Query:  L
        L
Subjt:  L

KAB1219262.1 hypothetical protein CJ030_MR3G001255 [Morella rubra]1.2e-0731.79Show/hide
Query:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------
        PGG  P     +ACR+CD VF S+QALINHI +H+ ++ +A             +    M+ F P   ++A P  T + LP   +R              
Subjt:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------

Query:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVAD---GAEEDDARQLYFCKLDLTLKL
         LG D   A+    P Q  P ARN F   P    P   +      +AE+   DCT+PY+NQL+  I  V D    +++ + +      LDL LKL
Subjt:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVAD---GAEEDDARQLYFCKLDLTLKL

KAB8495643.1 hypothetical protein FH972_025385 [Carpinus fangiana]1.4e-0834.74Show/hide
Query:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S
        P  S   +ACR+CD VF S+QALINHI +H+A++ +     AA+ SR+H    +++       F    P  A      L L  R S P+          S
Subjt:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S

Query:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYF--CKLDLTLKL
               +L P Q+SP AR  F    P       Q        EE  GDCT+PY++QLE  I  V   A+ +D     F   KLDL LKL
Subjt:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYF--CKLDLTLKL

KAE8651808.1 hypothetical protein Csa_006798 [Cucumis sativus]2.6e-5863.68Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F R     T ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR  Q   Q  RFP GP FL  PRATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEE-AAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLK
        P+R+S+PN +GF+ AES+W NQ+SPF R+VFREG   P  PP  +GQY  N    EE   GDCT+PYINQLEKC+PKV +G EEDD RQLY  K+DLTLK
Subjt:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEE-AAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLK

Query:  L
        L
Subjt:  L

KAG6574909.1 hypothetical protein SDJN03_25548, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7274.87Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MAEF R+    TAADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+GA    ++AAASRR +QQRSQ HR PPGP     PRATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSA-PNSLGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKV-ADGAEEDDARQLYFCKLDLTLKL
        PSR+S  PNSLGFDAAESLWPNQLSPFAR++FREGPP   PPVGQYL NW+ AEEA GDCT+PYINQLEKC+PKV   G EEDD RQLYF KLDL+L+L
Subjt:  PSRFSA-PNSLGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKV-ADGAEEDDARQLYFCKLDLTLKL

TrEMBL top hitse value%identityAlignment
A0A0A0LNN3 C2H2-type domain-containing protein8.1e-5062.3Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F R     T ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR  Q   Q  RFP GP FL  PRATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEE-AAGDCTRPYINQLEKCIPKVADGAE
        P+R+S+PN +GF+ AES+W NQ+SPF R+VFREG   P  PP  +GQY  N    EE   GDCT+PYINQLEKC+PKV  G E
Subjt:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEE-AAGDCTRPYINQLEKCIPKVADGAE

A0A2N9E7H8 C2H2-type domain-containing protein9.0e-0931.72Show/hide
Query:  VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRS-QMHRFPPGPPFLAQPRATALFLPSRFSAPNSLGFDAAESLW-----------
        +ACR+CD VF S+QALINHI +H+ ++ A + +           QR    + F P       PR T     +R      L        +           
Subjt:  VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRS-QMHRFPPGPPFLAQPRATALFLPSRFSAPNSLGFDAAESLW-----------

Query:  -PNQLSPFARNVFREGPPPCAPPVGQYLPNWSEA-----EEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLY--FCKLDLTLKL
         P  +SP ARN F        PP  Q++ +  +A     EE +GDCT+PY+NQL+  I K+ D  + +D         KLDL LKL
Subjt:  -PNQLSPFARNVFREGPPPCAPPVGQYLPNWSEA-----EEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLY--FCKLDLTLKL

A0A5A7U6B7 C2H2-type domain-containing protein6.0e-6165.17Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F    A+GT ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR   Q  Q  RFP GP FL   RATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLK
        P+RFS+PNS+GF+ AES+W N Q+SPF R+VFR+G PPP  PP  VGQY  N    +E  GDCT+PYINQLEKC+PKV  G EEDD RQLY  K+DLTLK
Subjt:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLK

Query:  L
        L
Subjt:  L

A0A5N6L1V8 C2H2-type domain-containing protein6.9e-0934.74Show/hide
Query:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S
        P  S   +ACR+CD VF S+QALINHI +H+A++ +     AA+ SR+H    +++       F    P  A      L L  R S P+          S
Subjt:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S

Query:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYF--CKLDLTLKL
               +L P Q+SP AR  F    P       Q        EE  GDCT+PY++QLE  I  V   A+ +D     F   KLDL LKL
Subjt:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYF--CKLDLTLKL

A0A6A1W232 C2H2-type domain-containing protein5.8e-0831.79Show/hide
Query:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------
        PGG  P     +ACR+CD VF S+QALINHI +H+ ++ +A             +    M+ F P   ++A P  T + LP   +R              
Subjt:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------

Query:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVAD---GAEEDDARQLYFCKLDLTLKL
         LG D   A+    P Q  P ARN F   P    P   +      +AE+   DCT+PY+NQL+  I  V D    +++ + +      LDL LKL
Subjt:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVAD---GAEEDDARQLYFCKLDLTLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAATTTTGCCGCAGCACCGCCCAAGGAACCGCCGCCGATCTCCACCATCTACGCCCGCTTACGATTCCCGGCGGAAGCGGTCCGCTCGTCGCTTGCCGAATCTG
CGACGCCGTGTTCTCCAGTAGCCAAGCCCTAATCAACCACATCGGAGCTCACGTCGCCGACGACGGCGCCGCAGCCGCCGTAGCAGCAGCAGCAGCTTCCAGAAGACACA
ATCAACAACGAAGCCAAATGCATCGGTTTCCGCCTGGTCCGCCGTTCTTGGCGCAGCCGCGAGCGACAGCGCTGTTTCTGCCGAGCAGATTCTCGGCGCCTAATTCGCTA
GGTTTTGACGCGGCGGAATCGCTTTGGCCAAATCAACTCTCTCCATTCGCTAGAAACGTCTTCAGAGAGGGGCCGCCGCCGTGTGCTCCGCCCGTCGGCCAGTACTTGCC
GAATTGGAGTGAGGCGGAGGAGGCGGCCGGCGACTGTACGAGGCCGTACATAAATCAATTGGAGAAATGTATACCAAAAGTGGCGGACGGAGCTGAAGAAGACGACGCTC
GTCAACTGTATTTCTGCAAACTAGACCTCACTCTGAAGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAATTTTGCCGCAGCACCGCCCAAGGAACCGCCGCCGATCTCCACCATCTACGCCCGCTTACGATTCCCGGCGGAAGCGGTCCGCTCGTCGCTTGCCGAATCTG
CGACGCCGTGTTCTCCAGTAGCCAAGCCCTAATCAACCACATCGGAGCTCACGTCGCCGACGACGGCGCCGCAGCCGCCGTAGCAGCAGCAGCAGCTTCCAGAAGACACA
ATCAACAACGAAGCCAAATGCATCGGTTTCCGCCTGGTCCGCCGTTCTTGGCGCAGCCGCGAGCGACAGCGCTGTTTCTGCCGAGCAGATTCTCGGCGCCTAATTCGCTA
GGTTTTGACGCGGCGGAATCGCTTTGGCCAAATCAACTCTCTCCATTCGCTAGAAACGTCTTCAGAGAGGGGCCGCCGCCGTGTGCTCCGCCCGTCGGCCAGTACTTGCC
GAATTGGAGTGAGGCGGAGGAGGCGGCCGGCGACTGTACGAGGCCGTACATAAATCAATTGGAGAAATGTATACCAAAAGTGGCGGACGGAGCTGAAGAAGACGACGCTC
GTCAACTGTATTTCTGCAAACTAGACCTCACTCTGAAGCTCTGA
Protein sequenceShow/hide protein sequence
MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLPSRFSAPNSL
GFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSEAEEAAGDCTRPYINQLEKCIPKVADGAEEDDARQLYFCKLDLTLKL