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Spg023626 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023626
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationscaffold13:4493784..4495203
RNA-Seq ExpressionSpg023626
SyntenySpg023626
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR017443 - Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
IPR033966 - RuBisCO
IPR036422 - RuBisCO large subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEW91005.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Abies vejarii]7.4e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
AGT59980.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Dendrobium longicornu]7.4e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
AHZ64806.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Thrixspermum japonicum]7.4e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
PHT40505.1 Ribulose bisphosphate carboxylase large chain [Capsicum baccatum]5.7e-1481.63Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VTLQPG+PP+EAG VVAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
QNO39056.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Dendrobium jinghuanum]7.4e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
TrEMBL top hitse value%identityAlignment
A0A059UIY4 Ribulose bisphosphate carboxylase large chain (Fragment)3.6e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
A0A2G2W5K2 Ribulose bisphosphate carboxylase large chain2.8e-1481.63Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VTLQPG+PP+EAG VVAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
A0A6G7KSD8 Ribulose bisphosphate carboxylase large chain (Fragment)3.6e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
G9JUI7 Ribulose bisphosphate carboxylase large chain (Fragment)3.6e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
T1T635 Ribulose bisphosphate carboxylase large chain (Fragment)3.6e-1479.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        TYILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
SwissProt top hitse value%identityAlignment
P28378 Ribulose bisphosphate carboxylase large chain (Fragment)3.7e-1679.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG TNLDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
P28396 Ribulose bisphosphate carboxylase large chain (Fragment)2.2e-1678Show/hide
Query:  YTYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        +T ILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG TNLDRYKG
Subjt:  YTYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
P28401 Ribulose bisphosphate carboxylase large chain (Fragment)3.7e-1679.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG TNLDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
P28411 Ribulose bisphosphate carboxylase large chain (Fragment)3.7e-1679.59Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG TNLDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
P28452 Ribulose bisphosphate carboxylase large chain (Fragment)1.3e-1681.63Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VT QPG+PP+EAG VVAAESS GTWTTVWTDG TNLDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases1.0e-1677.55Show/hide
Query:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG
        T ILA F+VT QPG+PP+EAG  VAAESS GTWTTVWTDG T+LDRYKG
Subjt:  TYILATFQVTLQPGIPPKEAGVVVAAESSAGTWTTVWTDGFTNLDRYKG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGTGTCAACAAATATGATAGAAATGTGGACTGTGGAGAGGCTTTTGATTCTTAATTTGCGGGAAAAGTCGCCACTAGAAGAAGTGGTCAAACGTGAGAAAGCAAG
AATGGCGTTGCAGTTTACCAGAGATGGAAAGGATGCTCGAACCTTGATCAGCATGAAGGAAATCCCGTGCAACTACCATCGAAGGGTGATCGTCGACGTCATTCATGGCC
AACGAAGACACGCGAGCTGTTATACTTATATCTTGGCAACATTCCAAGTAACTCTTCAACCGGGAATTCCACCCAAGGAAGCAGGGGTCGTTGTAGCTGCTGAATCTTCT
GCTGGTACATGGACAACTGTATGGACCGATGGGTTTACCAATCTTGATCGTTACAAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGTGTCAACAAATATGATAGAAATGTGGACTGTGGAGAGGCTTTTGATTCTTAATTTGCGGGAAAAGTCGCCACTAGAAGAAGTGGTCAAACGTGAGAAAGCAAG
AATGGCGTTGCAGTTTACCAGAGATGGAAAGGATGCTCGAACCTTGATCAGCATGAAGGAAATCCCGTGCAACTACCATCGAAGGGTGATCGTCGACGTCATTCATGGCC
AACGAAGACACGCGAGCTGTTATACTTATATCTTGGCAACATTCCAAGTAACTCTTCAACCGGGAATTCCACCCAAGGAAGCAGGGGTCGTTGTAGCTGCTGAATCTTCT
GCTGGTACATGGACAACTGTATGGACCGATGGGTTTACCAATCTTGATCGTTACAAAGGATGA
Protein sequenceShow/hide protein sequence
MLVSTNMIEMWTVERLLILNLREKSPLEEVVKREKARMALQFTRDGKDARTLISMKEIPCNYHRRVIVDVIHGQRRHASCYTYILATFQVTLQPGIPPKEAGVVVAAESS
AGTWTTVWTDGFTNLDRYKG