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Spg023647 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023647
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationscaffold13:443375..444512
RNA-Seq ExpressionSpg023647
SyntenySpg023647
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026193.1 hypothetical protein SDJN02_12692 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1993.1Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
XP_022955494.1 uncharacterized protein LOC111457503 isoform X1 [Cucurbita moschata]9.5e-2073.75Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG     +  E +E + NK++ E+
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
XP_022955495.1 uncharacterized protein LOC111457503 isoform X2 [Cucurbita moschata]4.3e-2073.75Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG    D     +E + NK++ E+
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
XP_022980644.1 uncharacterized protein LOC111479948 isoform X1 [Cucurbita maxima]2.8e-1993.1Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
XP_022980645.1 uncharacterized protein LOC111479948 isoform X2 [Cucurbita maxima]2.8e-1993.1Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
TrEMBL top hitse value%identityAlignment
A0A5D3DC07 TPR_REGION domain-containing protein3.0e-1972.15Show/hide
Query:  EQFNDPSALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIK
        ++  + SALEKKKAD   EFGAIDYDAPVESEEKTIG G KIGIGVAVLVFG VFALGDFLPSG    D      ENIK
Subjt:  EQFNDPSALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIK
A0A6J1GV96 uncharacterized protein LOC111457503 isoform X22.1e-2073.75Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG    D     +E + NK++ E+
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
A0A6J1GWF7 uncharacterized protein LOC111457503 isoform X14.6e-2073.75Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG     +  E +E + NK++ E+
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
A0A6J1IX11 uncharacterized protein LOC111479948 isoform X21.3e-1993.1Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
A0A6J1IZV0 uncharacterized protein LOC111479948 isoform X11.3e-1993.1Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
        SALEKKKADN  EFGAIDYDAPVE EEKTIGLG KIGIGVAVLVFGLVFALGDFLPSG
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-2058.75Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
        SALE+KK + + EFG IDYDAPV+S++KTIGLG K+G+G+AV+VFGLVFALGDFLP+G    D+  + T  +KN+++ E+
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEK
AT1G78915.2 Tetratricopeptide repeat (TPR)-like superfamily protein9.2e-2166.67Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECT
        SALE+KK + + EFG IDYDAPV+S++KTIGLG K+G+G+AV+VFGLVFALGDFLP+GR     FR  T
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECT
AT1G78915.3 Tetratricopeptide repeat (TPR)-like superfamily protein4.5e-2072.58Show/hide
Query:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCV
        SALE+KK + + EFG IDYDAPV+S++KTIGLG K+G+G+AV+VFGLVFALGDFLP+GR CV
Subjt:  SALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATGCGAAGGAAGTTTATGCTGCAGAACCTCAGAGCAATTTAATGATCCATCAGCACTTGAGAAGAAAAAGGCAGACAATATAAACGAATTTGGAGCAATTGACTA
TGACGCACCAGTGGAATCTGAAGAGAAAACAATTGGACTTGGTATCAAGATTGGAATAGGTGTAGCTGTTTTGGTCTTTGGCTTGGTTTTTGCTCTCGGTGACTTTCTTC
CCTCTGGAAGGTACTGCGTAGATAACTTTCGAGAATGCACAGAAAATATCAAGAACAAGGTCACAGCAGAAAAACTAAAAGCAAACAAACCACCAGCTATTTTCGTGAGA
GCTGGGAACCTCTCCTACCAAGCCTTTCAGCCACAAAATTCCACAATAGCTGCTAACCTCAGCCTGCTTTTTGCTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATGCGAAGGAAGTTTATGCTGCAGAACCTCAGAGCAATTTAATGATCCATCAGCACTTGAGAAGAAAAAGGCAGACAATATAAACGAATTTGGAGCAATTGACTA
TGACGCACCAGTGGAATCTGAAGAGAAAACAATTGGACTTGGTATCAAGATTGGAATAGGTGTAGCTGTTTTGGTCTTTGGCTTGGTTTTTGCTCTCGGTGACTTTCTTC
CCTCTGGAAGGTACTGCGTAGATAACTTTCGAGAATGCACAGAAAATATCAAGAACAAGGTCACAGCAGAAAAACTAAAAGCAAACAAACCACCAGCTATTTTCGTGAGA
GCTGGGAACCTCTCCTACCAAGCCTTTCAGCCACAAAATTCCACAATAGCTGCTAACCTCAGCCTGCTTTTTGCTCTATAA
Protein sequenceShow/hide protein sequence
MQCEGSLCCRTSEQFNDPSALEKKKADNINEFGAIDYDAPVESEEKTIGLGIKIGIGVAVLVFGLVFALGDFLPSGRYCVDNFRECTENIKNKVTAEKLKANKPPAIFVR
AGNLSYQAFQPQNSTIAANLSLLFAL