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Spg023667 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023667
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionER lumen protein-retaining receptor
Genome locationscaffold13:5582821..5583557
RNA-Seq ExpressionSpg023667
SyntenySpg023667
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046923 - ER retention sequence binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3491531.1 unnamed protein product [Digitaria exilis]5.1e-0991.18Show/hide
Query:  AAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        A W+AGLVQTLLYADFFYYYI+SWKNNVKLELPA
Subjt:  AAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
KAF9666110.1 hypothetical protein SADUNF_Sadunf16G0194600 [Salix dunnii]1.7e-1244.17Show/hide
Query:  MIHEV-SIYIHLLFFSFQRVPCIVHIELDLSLLYGAWLCPLDKYVSPSLTHAHAHTHEQCIQKGRGYSLPMNCLATNHQTSNKFALAAWIAGLVQTLLYA
        ++H + S  + L   S  R+  IVHI+L LSLLYGA LCPLD YV                                        +  WI+GLVQTLLYA
Subjt:  MIHEV-SIYIHLLFFSFQRVPCIVHIELDLSLLYGAWLCPLDKYVSPSLTHAHAHTHEQCIQKGRGYSLPMNCLATNHQTSNKFALAAWIAGLVQTLLYA

Query:  DFFYYYILSWKNNVKLELPA
        DFFYYY  SWKNNVKLELPA
Subjt:  DFFYYYILSWKNNVKLELPA
PKA63833.1 ER lumen protein retaining receptor [Apostasia shenzhenica]6.6e-0970.83Show/hide
Query:  CLATNHQTSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        CL      S  F+ AAWI+GL+QTLLYADFFYYY LSWKNNVKL+LPA
Subjt:  CLATNHQTSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
RLM99948.1 hypothetical protein C2845_PM06G00240 [Panicum miliaceum]1.7e-0978.05Show/hide
Query:  TSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        ++N  +L+AW+AGLVQT LYADFFYYY LSWKNNVKLELPA
Subjt:  TSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
XP_038906927.1 ER lumen protein-retaining receptor-like [Benincasa hispida]6.6e-09100Show/hide
Query:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
Subjt:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
TrEMBL top hitse value%identityAlignment
A0A0A0LI81 ER lumen protein-retaining receptor3.2e-09100Show/hide
Query:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
Subjt:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
A0A0E0DU43 ER lumen protein-retaining receptor1.9e-0978.57Show/hide
Query:  QTSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        ++S+   L AWIAGLVQT LYADFFYYY LSWKNNVKLELPA
Subjt:  QTSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
A0A1S3C4L8 ER lumen protein-retaining receptor7.1e-0996.88Show/hide
Query:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        WIAGL+QTLLYADFFYYYILSWKNNVKLELPA
Subjt:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
A0A2I0B7Q6 ER lumen protein-retaining receptor3.2e-0970.83Show/hide
Query:  CLATNHQTSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        CL      S  F+ AAWI+GL+QTLLYADFFYYY LSWKNNVKL+LPA
Subjt:  CLATNHQTSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
A0A3L6RAU0 ER lumen protein-retaining receptor8.4e-1078.05Show/hide
Query:  TSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        ++N  +L+AW+AGLVQT LYADFFYYY LSWKNNVKLELPA
Subjt:  TSNKFALAAWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
SwissProt top hitse value%identityAlignment
P35402 ER lumen protein-retaining receptor A2.9e-0772.73Show/hide
Query:  AWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        A ++GLVQT LYADFFYYY +SWK N KL+LPA
Subjt:  AWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
Q8VWI1 ER lumen protein-retaining receptor B8.1e-1087.5Show/hide
Query:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        WIAG VQTLLYADFFYYY LSWKNN KL+LPA
Subjt:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
Q9ZTN2 ER lumen protein-retaining receptor4.7e-1087.5Show/hide
Query:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        WIAGL+QTLLYADFFYYY  SWKNN KLELPA
Subjt:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
Arabidopsis top hitse value%identityAlignment
AT1G29330.1 ER lumen protein retaining receptor family protein2.0e-0872.73Show/hide
Query:  AWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        A ++GLVQT LYADFFYYY +SWK N KL+LPA
Subjt:  AWIAGLVQTLLYADFFYYYILSWKNNVKLELPA
AT3G25040.1 endoplasmic reticulum retention defective 2B5.8e-1187.5Show/hide
Query:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA
        WIAG VQTLLYADFFYYY LSWKNN KL+LPA
Subjt:  WIAGLVQTLLYADFFYYYILSWKNNVKLELPA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCACGAAGTTTCAATATACATTCATCTCCTTTTCTTTTCTTTTCAGCGCGTACCGTGCATTGTACATATTGAATTGGATCTATCGCTACTTTACGGAGCT
TGGCTTTGTCCGTTGGATAAGTATGTCTCTCCCTCTCTCACACACGCACACGCCCACACACACGAGCAGTGCATTCAAAAAGGAAGAGGATATTCCTTACCAATG
AACTGTTTAGCTACTAATCATCAAACCTCAAACAAATTCGCTCTTGCAGCTTGGATAGCCGGTCTCGTGCAAACGCTGCTGTATGCCGATTTCTTTTACTACTAT
ATCCTTAGCTGGAAGAACAACGTCAAGCTTGAGTTACCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCACGAAGTTTCAATATACATTCATCTCCTTTTCTTTTCTTTTCAGCGCGTACCGTGCATTGTACATATTGAATTGGATCTATCGCTACTTTACGGAGCT
TGGCTTTGTCCGTTGGATAAGTATGTCTCTCCCTCTCTCACACACGCACACGCCCACACACACGAGCAGTGCATTCAAAAAGGAAGAGGATATTCCTTACCAATG
AACTGTTTAGCTACTAATCATCAAACCTCAAACAAATTCGCTCTTGCAGCTTGGATAGCCGGTCTCGTGCAAACGCTGCTGTATGCCGATTTCTTTTACTACTAT
ATCCTTAGCTGGAAGAACAACGTCAAGCTTGAGTTACCAGCTTAG
Protein sequenceShow/hide protein sequence
MIHEVSIYIHLLFFSFQRVPCIVHIELDLSLLYGAWLCPLDKYVSPSLTHAHAHTHEQCIQKGRGYSLPMNCLATNHQTSNKFALAAWIAGLVQTLLYADFFYYY
ILSWKNNVKLELPA