CuGenDBv2

Gene ID	Spg023680
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	scaffold13:11423897..11429453
RNA-Seq Expression	Spg023680
Synteny	Spg023680
Gene Ontology terms	NA
InterPro domains	IPR025558 - Domain of unknown function DUF4283 IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBN69274.1 TatD related DNase [Prunus dulcis]

1.3e-71

36.95

Show/hide

Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   +T+  +A  +GC++G WP  YLGLPL G+PR L+FW+P+++K+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  V  +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKH-------
        FLW   ++G+  HL++W  +    ++GGLG+ S+R++N AL AKW+WRF  E  +LW ++I  KYG  ++  W +        + PW+ I K        
Subjt:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKH-------

Query:  ------------------------QDLV-----TSRIRHQVVREAWNSNCS----FWDLQLGRHLKDDEASEWMHLNVILDPI-VLAQTADSWIWPLSAN
                                +DL       SR ++Q +  AW +N       WD    R+L + E +E + L  IL  + +     D   W +   
Subjt:  ------------------------QDLV-----TSRIRHQVVREAWNSNCS----FWDLQLGRHLKDDEASEWMHLNVILDPI-VLAQTADSWIWPLSAN

Query:  DFFSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAF
          FS KS  + + +TT+V    +  R+IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC  CK++ E +DHLFIHCSY+  +W ++L A 
Subjt:  DFFSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAF

Query:  GWNWLL
        G  W++
Subjt:  GWNWLL

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.7e-69

33.83

Show/hide

Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I++  D  + +A  +G   G  P SYLG+PL G P + +FWD +++KI+K+ S W  S +SKGGR TL+ +TL +LP Y MS+F +P  +A +++   RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLWKDGQH-----LIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGP---STHLNWGSLNKAKGPWKAIVKHQDLVTSRI
        FLW    +     LI+W+ ++ P ++GGLG+HS+   N ALL KW+W+F  EK  LW++LI  KY      +  + G  +    PWKA+ +        I
Subjt:  FLWKDGQH-----LIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGP---STHLNWGSLNKAKGPWKAIVKHQDLVTSRI

Query:  RHQV------------------------------------VREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTADSWIWPLSANDFFSTK
          +V                                    V+E WN + + W L + R L+D E + W ++   L   +  +     +W L++N+ F T 
Subjt:  RHQV------------------------------------VREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTADSWIWPLSANDFFSTK

Query:  SLMADMGNT--TTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWN
        S+   +     +      +L + +WK  +PKK KFF+W L H  I+T D LQKR+P   LSP+WC +C +S E ++HLFIHC Y+  +W+K  +   WN
Subjt:  SLMADMGNT--TTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWN

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

4.6e-69

34.09

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Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I++  D    +   +G   G  P +YLG+PL G P + +FWD I++KI+K+ S W  S +SKGGR TL+ +TL +LP Y +S+F +P  +A +++   RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLWKDGQH-----LIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNW---GSLNKAKGPWKAIV----------
        FLW    +     LI+W+ ++ P ++GGLG+HS+   N ALL KW+W+F  EK  LW++LI  KY       +   G  +    PWKA+           
Subjt:  FLWKDGQH-----LIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNW---GSLNKAKGPWKAIV----------

Query:  --KHQD------------------LVTSRI------RHQVVREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTADSWIWPLSANDFFSTK
          K  D                  LV  R+      +   V++ WN +   W++ + R L+D E + W ++   L   +  +     +W L++N+ F T 
Subjt:  --KHQD------------------LVTSRI------RHQVVREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTADSWIWPLSANDFFSTK

Query:  SLMADMGNTTTVFLENH--LVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWN
        S+  D+   +      H  L + +WK  +PKK KFF+W L H  I+T D LQKR+P   LSP+WC +C +S E ++HLFIHC Y+  +W+K  +   WN
Subjt:  SLMADMGNTTTVFLENH--LVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWN

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

5.1e-68

33.08

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Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I++  D    +   +G   G  P +YLG+PL G P + +FWD I++KI+K+ S W  S +SKGGR TL+ +TL +LP Y +S+F +P  +A +++   RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLWKDGQH-----LIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNW---GSLNKAKGPWKAIVKHQDLVTSRI
        FLW    +     LI+W+ ++ P ++GGLG+H +   N ALL KW+W+F  EK  LW++LI  KY       +   G  +    PWKA+          I
Subjt:  FLWKDGQH-----LIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNW---GSLNKAKGPWKAIVKHQDLVTSRI

Query:  RHQV------------------------------------VREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTADSWIWPLSANDFFSTK
          +V                                    V++ WN +   W++ + R L+D E + W ++   L   +  +     +W L++N+ F T 
Subjt:  RHQV------------------------------------VREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTADSWIWPLSANDFFSTK

Query:  SLMADMGNTTTVFLENH--LVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWN
        S+  D+   +      H  L + +WK  +PKK KFF+W L H  I+T D LQKR+P   LSP+WC +C +S E ++HLFIHC Y+  +W+K  +   WN
Subjt:  SLMADMGNTTTVFLENH--LVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWN

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]

5.5e-70

36.82

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Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   + +  +A  +GC++G WP  YLGLPL G+PR L+FW+P+ +K+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  VA +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVK--------
        FLW   ++G+  HL++W  +    ++GGLG+ S+R++N AL AKW+WRF  E  +LW ++I  KYG  ++  W +        + PW+ I K        
Subjt:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVK--------

Query:  -------------HQDL----------------VTSRIRHQVVREAWNSNCSF-WDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDF
                      +DL                ++ R    + R A N      WD    R+L + E +E + L  IL  + L     D   W +     
Subjt:  -------------HQDL----------------VTSRIRHQVVREAWNSNCSF-WDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDF

Query:  FSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGW
        FS KS  + + +TT          +IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC LCK++ E +DHLFIHCSY+  +W ++L A G 
Subjt:  FSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGW

Query:  NW
         W
Subjt:  NW

TrEMBL top hits

e value

%identity

Alignment

A0A5H2XQW2 TatD related DNase

6.3e-72

36.95

Show/hide

Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   +T+  +A  +GC++G WP  YLGLPL G+PR L+FW+P+++K+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  V  +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKH-------
        FLW   ++G+  HL++W  +    ++GGLG+ S+R++N AL AKW+WRF  E  +LW ++I  KYG  ++  W +        + PW+ I K        
Subjt:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKH-------

Query:  ------------------------QDLV-----TSRIRHQVVREAWNSNCS----FWDLQLGRHLKDDEASEWMHLNVILDPI-VLAQTADSWIWPLSAN
                                +DL       SR ++Q +  AW +N       WD    R+L + E +E + L  IL  + +     D   W +   
Subjt:  ------------------------QDLV-----TSRIRHQVVREAWNSNCS----FWDLQLGRHLKDDEASEWMHLNVILDPI-VLAQTADSWIWPLSAN

Query:  DFFSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAF
          FS KS  + + +TT+V    +  R+IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC  CK++ E +DHLFIHCSY+  +W ++L A 
Subjt:  DFFSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAF

Query:  GWNWLL
        G  W++
Subjt:  GWNWLL

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)

9.1e-71

38.36

Show/hide

Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   D +  +A  +GC++G WP  YLGLPL G+PR L+FW+P++EK+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  VA +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLWK---DGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLN-WGSLNK-----------AKGPWKAIVK
        FLW+   +G+  HL++W  +    ++GGLG+ S+R++  AL AKW+WRF  E  +LW ++I  KYG  ++ N W  ++K           + G  + I  
Subjt:  FLWK---DGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLN-WGSLNK-----------AKGPWKAIVK

Query:  HQDL---------------VTSRIRHQVVREAWNSNC--SFWDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDFFSTKSLMADMGNT
         +DL                 SR ++Q +    N++     WD    R+L + E +E + L  IL  + L     D   W +     FS KS  + + +T
Subjt:  HQDL---------------VTSRIRHQVVREAWNSNC--SFWDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDFFSTKSLMADMGNT

Query:  TTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWNWLL
        T          +IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC LCK++ E +DHLFIHCSY+  +W K+L A G  W++
Subjt:  TTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWNWLL

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)

7.0e-71

37.13

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Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   D +  +A  +GC++G WP  YLGLPL G+PR L+FW+P+++K+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  VA +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKH-------
        FLW   +DG+  HL++W  +    ++GGLG+ S+R++N AL AKW+WRF  E  +LW ++I  KYG  ++  W +        + PW+ I K        
Subjt:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKH-------

Query:  ------------------------QDLV-----TSRIRHQVVREAWNSNCS--FWDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDF
                                +DL       SR ++Q +    N++     WD    R+L + E +E + L  IL  + L     D   W +     
Subjt:  ------------------------QDLV-----TSRIRHQVVREAWNSNCS--FWDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDF

Query:  FSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGW
        FS KS  + + +TT          +IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC LCK++ E +DHLFIHCSY+  +W ++L A G 
Subjt:  FSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGW

Query:  NWLL
         W++
Subjt:  NWLL

M5WPQ5 Reverse transcriptase domain-containing protein

1.6e-70

37.16

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Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   + +  +A  +GC++G WP  YLGLPL G+PR L+FW+P++EK+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  VA +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVK--------
        FLW   ++G+  HL++W  +    ++GGLG+ S+R++N AL AKW+WRF  E  +LW ++I  KYG  ++  W +        + PW+ I K        
Subjt:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVK--------

Query:  -------------HQDL---------------VTSRIRHQVVREAWNSNC--SFWDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDF
                      +DL                 SR ++Q +    N++     WD    R+L + E +E + L  IL  + L     D   W +     
Subjt:  -------------HQDL---------------VTSRIRHQVVREAWNSNC--SFWDLQLGRHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDF

Query:  FSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGW
        FS KS  + + +TT          +IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC LCK++ E +DHLFIHCSY+  +W K+L A G 
Subjt:  FSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGW

Query:  NWLLQGTLQ
         W  Q   Q
Subjt:  NWLLQGTLQ

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)

1.8e-71

38.4

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Query:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN
        I+   D +  +A  +GC++G WP  YLGLPL G+PR L+FW+P+++K+EKR   W  + +SKGGR TL+QA LS++P+YYMSLF MP  VA +V+++ RN
Subjt:  ISICPDTIQELAIKYGCKIGIWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRN

Query:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKHQDLVTSR
        FLW   +DG+  HL++W  +    ++GGLG+ S+R++N AL AKW+WRF  E  +LW ++I  KYG  ++  W +        + PW+ I K  +     
Subjt:  FLW---KDGQ--HLIKWSTLICPMKQGGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLN----KAKGPWKAIVKHQDLVTSR

Query:  IRHQVVREAWNSNCSFWD---LQLG-------------------RHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDFFSTKSLMADMGNTTTV
         R  V          FW+   L+ G                   R+L + E +E + L  IL  + L     D   W +     FS KS  + + +TT  
Subjt:  IRHQVVREAWNSNCSFWD---LQLG-------------------RHLKDDEASEWMHLNVILDPIVL-AQTADSWIWPLSANDFFSTKSLMADMGNTTTV

Query:  FLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWNWLL
                +IWK   P KI+FF+W  A+  I+T D +Q+R P + LSPSWC LCK++ E +DHLFIHCSY+  +W ++L A G  W+L
Subjt:  FLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAFGWNWLL

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

5.8e-30

27.92

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Query:  IVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRNFLW-----KDGQHLIKWSTLICPMKQGGLGLHSMRDKNRALLA
        I+E++  R S W    +S  GR TL +A LS++P + MS   +P  + NR+D++ R FLW     K  QHL+KWS +  P K+GGLG+ + +  NRAL++
Subjt:  IVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRNFLW-----KDGQHLIKWSTLICPMKQGGLGLHSMRDKNRALLA

Query:  KWVWRFNHEKTTLWRKLINDKY--GPSTHLNW----GSLNKAKGPWKAI-VKHQDLVTSRI-----RHQVVR---EAWNSNCSFWDLQLGRHLKDDEASE
        K  WR   EK +LW  ++  KY  G      W    GS +     W++I +  +D+V+  +       Q +R   + W S     +L  G    D +   
Subjt:  KWVWRFNHEKTTLWRKLINDKY--GPSTHLNW----GSLNKAKGPWKAI-VKHQDLVTSRI-----RHQVVR---EAWNSNCSFWDLQLGRHLKDDEASE

Query:  WMHL-------------------------NVILDPIVLAQTADSWIWPLSANDFFSTKSLMADMGNTTTVFLEN--HLVRAIWKDIYPKKIKFFLWELAH
           L                          V+LD +  A+  D   W  S +  FS +S   +M     V   N       +WK   P+++K FLW + +
Subjt:  WMHL-------------------------NVILDPIVLAQTADSWIWPLSANDFFSTKSLMADMGNTTTVFLEN--HLVRAIWKDIYPKKIKFFLWELAH

Query:  RAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKIL
        +A+ T++   +R  +   + + C +CK   E++ H+   C    GIW +++
Subjt:  RAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKIL

P93295 Uncharacterized mitochondrial protein AtMg00310

1.7e-05

27.27

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Query:  LPTYYMSLFNMPNKVANRVDRICRNFLWK--DGQHLIKWST--LICPMKQ--GGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWG
        LP Y MS F +   +  ++      F W   + +  I W     +C  K+  GGLG   +   N+ALLAK  +R  H+  TL  +L+  +Y P + +   
Subjt:  LPTYYMSLFNMPNKVANRVDRICRNFLWK--DGQHLIKWST--LICPMKQ--GGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWG

Query:  SL-NKAKGPWKAIVKHQDLVT
        S+  +    W++I+  ++L++
Subjt:  SL-NKAKGPWKAIVKHQDLVT

Arabidopsis top hits

e value

%identity

Alignment

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.2e-06

27.27

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Query:  LPTYYMSLFNMPNKVANRVDRICRNFLWK--DGQHLIKWST--LICPMKQ--GGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWG
        LP Y MS F +   +  ++      F W   + +  I W     +C  K+  GGLG   +   N+ALLAK  +R  H+  TL  +L+  +Y P + +   
Subjt:  LPTYYMSLFNMPNKVANRVDRICRNFLWK--DGQHLIKWST--LICPMKQ--GGLGLHSMRDKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWG

Query:  SL-NKAKGPWKAIVKHQDLVT
        S+  +    W++I+  ++L++
Subjt:  SL-NKAKGPWKAIVKHQDLVT

Sequences

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CDS sequence

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ATGAAGCCCCCAACCAAACCCATGGCCATATCCACAACACTGAAGAAGCGATCAGCAACCATTGAACGAAAAACCTTCTCGATCGAAGTCGACAACAGAAGCAGAGGGAC
GAAAGTTAAGCTAGCAGAGATTACCGAAAACAGAGCCTATTTTCTTTCTTTGAAATGGGAATCACTCCGATGGCTTGTCTCGATCATGAGATCCCTTCTCTCCACCTCCA
TGACTCAAAAATTTTTCAAGGAAGAAAGATTCACGAAACAGACCGTCTGGGTTGAAAAGATCACAAACAAGAGAGGTGTACTGGCGGAGATTGCTCTTTTCCACGGCAAC
AGAGGTCTCAATAAGCTCTTCATTCCCGTCGGTCATGATAGGAAAGGTTGGGAGTCATTTTATAAGCTTATCGACAACTACCCACCATCTCTACCATTAAAAGCTCGGCA
GAAACCAAATCCACCAACCACCTTGAAAGCGGAGACTAAAGCCTTCTACAGACCTGTCCTCCCCTCACAGCCACCATTAAAAAACCCAACCAACCTCATAAAGACACGTC
AGTCACAGGTCCCTCTTATAAATCCATCCTCATTCAATCTGGGAAGAGAGCCATCGAAAATCCAGTCGGCGAACAAATTCACGAACCATTATGGCCAAACACAGTTGTCG
TCACAAGGAAGTTCTTCCACGAAGACTAGTACAAGATCACGAGAAATTGATTCTTTCACACTGAAATTTGAGCGATGGAACGAGGAAGAGCACATGAAAAACCCTGTGAT
TCCATCGTACAGAAGATGGATAAAAATTAAAAACTTGCCTCTTAATCGATGGGACTACGAAACCTTGAAGTATATTGGAGACGCCTGCGGAGGATTCATTGAAGCTGCCA
AAAAGACCCTCTCTAGAGTTGATTTAATGGAAGCTTCCATTAAGGTTAGCGAGAACGATGTTGGTTCTATACCAAGTGAAATTACGCTCCCATCTTCATCGAAAACAGTT
GTTACCGTCCAGATAGACCCCTTCTTCAATGCTGAGATTTTCGTTGGGTATATGGGAAGCGTTTACAGTCGACGATCTTCGCCGGAGCCTCATCGCCGAGAAGACAACAG
TTCAAACGATGTTGACGTATCAATGGGGATTTTGGGACCGTACCCTGGAGACTTGCACCTTTCAGATGTCAGGTACAAACACCCCTCTACCTACCAGCCTAAATCTGACC
ACACTGTTTCTGCGTACCCTAGCTCTGATCAGCCCATAATCCAACCATCTAATCCCATTAAGCCCACCACTAAAAAGCCCATCAACATAATACAATCAGAGCCCAAACCA
CCCAACCACAATAAACCTCTTCTAATCACCAACCAGCCCAATGTACCTGACCCACCAGTCGTAGCATCCACACCTGGCAAGCTTGCCGTCACCATTAAAAACAAAAATAC
TTATCTAGTCCCAGGTACAAAATTTTCAACCTCTACTTCACATATCGATCTCGACGATGATCCCTCCAGTCCCCTTCCTCTTTCATCTGCCCCTCTATCTCCCTCTGCTT
TCACCCCACCTATCCCAACATCCCCTACTGAGATCGAATTATCTAATACGATAGTGGGTTCTCTCCTTCTCGGCGACAACACAGAGGAAGTTGATATGGAAGACTCAGAG
GCTACCAACCCTCCCTCACCATCGGCAGCTATACGGATCCTTGCCCCCTGGCTCCAAAAATATCACGTGCTCACTGTTAAATCGTTATGGAGTTCTCGTGATATTAGTTG
GACCTCCTTGGATGCTTCTGGATCATCAGGGGGTATTTTGATTATGTGGAATGATCCCGCTTTGTCCATTTCAGAAGTGACAAAAGGTCTGTATTCTCTCACCATTCTCC
TTACTCTCACTGATGGTTATAGATTCTGGATTTCAGTATATCGGGGCACAATATCAATCTGCCCCGATACCATCCAAGAACTTGCCATCAAATATGGATGCAAAATAGGA
ATCTGGCCTAATTCTTACTTGGGGCTTCCTTTAAACGGGTCTCCTAGGACCCTCTCTTTTTGGGATCCTATTGTTGAAAAGATTGAAAAGCGGCCCTCGGTTTGGGGTAC
ATCTTATATATCTAAAGGAGGTCGTCACACTCTCCTCCAAGCTACATTATCTAACCTTCCCACATACTATATGTCTTTATTCAATATGCCCAACAAGGTTGCTAACAGAG
TGGACAGGATTTGCAGGAATTTCCTTTGGAAAGACGGCCAGCACCTTATTAAATGGAGCACCCTTATTTGCCCTATGAAACAAGGTGGCCTTGGATTGCACTCAATGAGA
GATAAGAACAGGGCTCTCCTTGCTAAATGGGTTTGGAGGTTCAACCATGAAAAGACAACACTATGGAGGAAACTCATTAATGATAAATATGGACCCTCCACCCACTTGAA
TTGGGGTTCTCTTAATAAAGCAAAAGGACCATGGAAAGCTATTGTCAAGCATCAAGATCTTGTTACTAGTAGAATTCGTCACCAAGTGGTGAGAGAAGCTTGGAATTCTA
ATTGCTCATTTTGGGATCTCCAACTTGGAAGACATTTGAAGGATGACGAAGCCTCTGAATGGATGCACTTAAATGTTATCCTTGATCCCATAGTTCTAGCTCAAACAGCA
GATTCGTGGATATGGCCCCTTAGTGCCAACGATTTTTTCTCCACGAAATCCTTAATGGCCGATATGGGTAACACCACCACCGTCTTTTTGGAGAATCATCTTGTACGGGC
CATTTGGAAGGATATATACCCTAAGAAGATCAAATTCTTCCTCTGGGAATTGGCTCATAGAGCAATCAGCACCAAAGATAATTTACAGAAGCGTATGCCTACATTAGCTC
TATCACCAAGTTGGTGTACATTGTGCAAGCAAAGCGATGAAACTCTTGATCACCTATTCATCCATTGTTCTTATGCTTGGGGAATATGGACCAAAATCCTCTCTGCTTTT
GGATGGAATTGGCTTTTACAGGGGACATTACAAGCACTCTTCACTCCACCTTGCTGGGCCACCCTTTTAAGAATGCCAAGGCAGTTTTATGGCTTCACATCATTAGAGCT
TTTTTCTGGGTTCTATGGAAAGAAAGAAATTATAGGATTTTTTCAGACAAAGAGCTTCCCTTTACCGAGCTTTTCGATATTATCATTTTCAATGCTATATCATGGTGTAA
ATCTTCTAGTATTTTGGCTTCTTACTCATATGCTTCCCTTTTAA

mRNA sequence

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Protein sequence

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MKPPTKPMAISTTLKKRSATIERKTFSIEVDNRSRGTKVKLAEITENRAYFLSLKWESLRWLVSIMRSLLSTSMTQKFFKEERFTKQTVWVEKITNKRGVLAEIALFHGN
RGLNKLFIPVGHDRKGWESFYKLIDNYPPSLPLKARQKPNPPTTLKAETKAFYRPVLPSQPPLKNPTNLIKTRQSQVPLINPSSFNLGREPSKIQSANKFTNHYGQTQLS
SQGSSSTKTSTRSREIDSFTLKFERWNEEEHMKNPVIPSYRRWIKIKNLPLNRWDYETLKYIGDACGGFIEAAKKTLSRVDLMEASIKVSENDVGSIPSEITLPSSSKTV
VTVQIDPFFNAEIFVGYMGSVYSRRSSPEPHRREDNSSNDVDVSMGILGPYPGDLHLSDVRYKHPSTYQPKSDHTVSAYPSSDQPIIQPSNPIKPTTKKPINIIQSEPKP
PNHNKPLLITNQPNVPDPPVVASTPGKLAVTIKNKNTYLVPGTKFSTSTSHIDLDDDPSSPLPLSSAPLSPSAFTPPIPTSPTEIELSNTIVGSLLLGDNTEEVDMEDSE
ATNPPSPSAAIRILAPWLQKYHVLTVKSLWSSRDISWTSLDASGSSGGILIMWNDPALSISEVTKGLYSLTILLTLTDGYRFWISVYRGTISICPDTIQELAIKYGCKIG
IWPNSYLGLPLNGSPRTLSFWDPIVEKIEKRPSVWGTSYISKGGRHTLLQATLSNLPTYYMSLFNMPNKVANRVDRICRNFLWKDGQHLIKWSTLICPMKQGGLGLHSMR
DKNRALLAKWVWRFNHEKTTLWRKLINDKYGPSTHLNWGSLNKAKGPWKAIVKHQDLVTSRIRHQVVREAWNSNCSFWDLQLGRHLKDDEASEWMHLNVILDPIVLAQTA
DSWIWPLSANDFFSTKSLMADMGNTTTVFLENHLVRAIWKDIYPKKIKFFLWELAHRAISTKDNLQKRMPTLALSPSWCTLCKQSDETLDHLFIHCSYAWGIWTKILSAF
GWNWLLQGTLQALFTPPCWATLLRMPRQFYGFTSLELFSGFYGKKEIIGFFQTKSFPLPSFSILSFSMLYHGVNLLVFWLLTHMLPF

Spg023680 (gene) of Sponge gourd (cylindrica) v1 genome