CuGenDBv2

Gene ID	Spg023706
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Dynein beta chain, ciliary protein
Genome location	scaffold13:1884913..1888138
RNA-Seq Expression	Spg023706
Synteny	Spg023706
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]

5.7e-84

88.71

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
        DRPMP+LRNTD+KSSKYEDRPAPPGTLNVAQMRH+ILLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDSL++KKK
Subjt:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]

2.8e-83

88.83

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Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS TASSLKMES+VDRKPP RV EKARESGALDSG    S+SGN+LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKD
        Y RPMPKLR+T++ SSKYEDRPAPPGTLNVAQMR +ILLHEGKADDHDGPMG+HQIAERYNVSVAQIQTILQFLSLPPEDSLR+K KD
Subjt:  YDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKD

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]

4.3e-84

88.71

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
        DRPMP+LRNTD+KSSKYEDRPAPPGTLNVAQMRH++LLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDSLR+KKK
Subjt:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]

6.7e-85

89.25

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESG+LDS    GSNSGNVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
        +RPMPKLRNTD+KSSKYEDRPAPPGTLNVAQMRH+ILLHEGKADDHDGPMGV+QIAERYNV V+QI+TILQFLSLPPEDSLR+KKK
Subjt:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

XP_023547640.1 uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]

6.7e-85

89.78

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R VEKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
        DRPMP+LRNTD+KSSKYEDRPAPPGTLNVAQMRH+ILLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDSLR+KKK
Subjt:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCC5 Uncharacterized protein

1.4e-83

88.83

Show/hide

Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS TASSLKMES+VDRKPP RV EKARESGALDSG    S+SGN+LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKD
        Y RPMPKLR+T++ SSKYEDRPAPPGTLNVAQMR +ILLHEGKADDHDGPMG+HQIAERYNVSVAQIQTILQFLSLPPEDSLR+K KD
Subjt:  YDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKD

A0A1S3C957 uncharacterized protein LOC103497865 isoform X1

3.4e-82

87.77

Show/hide

Query:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TASSLKMES+VDRKPP RV EKARESG+LDSG    S+SGN LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKD
        Y RPMPKLR+T++KSSKYEDRPAPPGTLNVAQMR +ILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPEDSLR+K  D
Subjt:  YDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKD

A0A6J1C9H1 uncharacterized protein LOC111009550

7.7e-79

82.9

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKA-----RESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEAS
        MGQAFRRAAGRIKPASSIDSTASSLKMESVVDR+PP R ++KA     RESGALDS    GSNS NV EERD QFDAML QMVGRIKSKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKA-----RESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEAS

Query:  VVERYDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKDP
        VVERY+RPMPKLRNTDVKSS+YEDRPAPPGTLNVAQMRHVI LHEGKA+DH+G M V QIA+RYNVSV QI TILQFLSLPPED+LR K KDP
Subjt:  VVERYDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKDP

A0A6J1H4J6 uncharacterized protein LOC111459975

2.1e-84

88.71

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
        DRPMP+LRNTD+KSSKYEDRPAPPGTLNVAQMRH++LLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDSLR+KKK
Subjt:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

A0A6J1L288 uncharacterized protein LOC111499180

3.2e-85

89.25

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESG+LDS    GSNSGNVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERY

Query:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
        +RPMPKLRNTD+KSSKYEDRPAPPGTLNVAQMRH+ILLHEGKADDHDGPMGV+QIAERYNV V+QI+TILQFLSLPPEDSLR+KKK
Subjt:  DRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G21400.1 unknown protein

1.6e-47

52.13

Show/hide

Query:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSG------NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVE
        MGQ  RRA G+IK       +  S+   S+   +  L  V+ +  + A+D  S+ G      NVLEERD ++D ML+QMVGRIK+KPGGK EMGEASVVE
Subjt:  MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSG------NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVE

Query:  RYDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK
           RP+PKLRNT  +S++YE+ P P GTLNVAQ+RH++LL +GK+ DH GPMGV++IAE+Y + V+Q+Q I QFLSLP E + ++KK+
Subjt:  RYDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCGAGCATCGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCT
GCGTGTGGTCGAGAAGGCTCGGGAGAGCGGCGCTCTTGATTCTGGAAGTAATTCGGGAAATGTGCTTGAAGAACGAGATACGCAGTTCGATGCCATGCTTAGCCAAATGG
TGGGTCGAATTAAATCAAAGCCAGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGGTATGACAGACCAATGCCAAAGCTACGAAATACAGATGTAAAATCC
AGTAAATACGAGGATCGGCCAGCTCCACCAGGCACTTTAAACGTAGCACAGATGCGCCATGTAATTCTACTGCATGAAGGAAAGGCTGATGATCATGATGGGCCAATGGG
CGTTCACCAAATTGCTGAAAGGTATAATGTCAGTGTTGCTCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGAGAAAAAGAAGGATC
CTTAA

mRNA sequence

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Protein sequence

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MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKS
SKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKDP

Spg023706 (gene) of Sponge gourd (cylindrica) v1 genome