; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023729 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023729
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold13:1546819..1547874
RNA-Seq ExpressionSpg023729
SyntenySpg023729
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-9067.86Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLV+LQ FEPL+DATS+L QI+KDAD +FT  M  +IASH+SPRFVATLQMS R FTNYS+DH + S++SLESFHDAMLDGGS+SSM++H+LE+  QM+
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFD-ASGHAPPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV
        LR++  S + PPLH EL LSP Q E LGQV YGKFFTV+SK LR+IIKELPLF +D V V  TS+R+KFSIASKEI +TKE       G+C+IVGYE + 
Subjt:  LRFD-ASGHAPPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV

Query:  ETQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHFP
        ET+LH+  RPM+FFLN TYKANRVWFYK TN+ SVISVPAFG++GQYV++FP
Subjt:  ETQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHFP

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]2.3e-8371.3Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL+ FEPL+DATS+LAQ+AKDAD KFTP M +II S+ SP+FVATLQ+SRR FTN+S+DHN  S++SL+ FHDAMLDGGS+SSMT+HLL+  NQMV
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGH-APPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV
        LRF+   H  PPLHHEL LSP Q E+LGQV YG FFTV S+ELRRIIKELPLF +D+V VTVT S++KFSI SKEIILTKE      GGHCKIVGYE +V
Subjt:  LRFDASGH-APPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV

Query:  ETQLHVVLRPMLFFLNLTYKANR
        ET+L VVLRPM+FFLN TY+AN+
Subjt:  ETQLHVVLRPMLFFLNLTYKANR

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]8.1e-8162.84Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKD-ADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM
        MFLV+L+NF+PL+DATS LAQI+ D AD KFTP+ F IIASH SPRF+ATLQ+S ++FT +S+D++H S++SLESFHDA+LDGGS++SMT+HLL+  NQM
Subjt:  MFLVRLQNFEPLVDATSILAQIAKD-ADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM

Query:  VLRFDA-SGHAPPLHHELILSPSQEED--LGQ--VAYGKFFTVHSKELRRIIKELPLFQEDS-VCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIV
        +LRFD  S    PLHHEL LSP Q ED  +GQ  +   K+F V SK LRRIIK+LP+FQ DS + V VT+SR+KFSIASKEIILT       +G HCKI 
Subjt:  VLRFDA-SGHAPPLHHELILSPSQEED--LGQ--VAYGKFFTVHSKELRRIIKELPLFQEDS-VCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIV

Query:  GYEADVETQLHVVLRPMLFFLNLTYKANRVWFYKKTNN-HSVISVPAFGLFGQYVIHFPHV
        G+E +VETQ  ++L PM+FFLN TYKANRVWFYK  NN ++++ VPA+G+FGQYVI+FP V
Subjt:  GYEADVETQLHVVLRPMLFFLNLTYKANRVWFYKKTNN-HSVISVPAFGLFGQYVIHFPHV

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]2.2e-7859.92Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL+NFEP   ATS LA IA++AD KFTP  F I  S+  PRFVA L M+   F NY +D++H SRISLESFHDA+LDGG   SMT+HLL NINQM+
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGHAPPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADVE
        LRF++S HAP + HEL L PSQEEDLG++ Y KFF++ SK LRR+I+ LP+F  DS+CVT T S++KFSIASKEI+LTKE         C IVGYE + E
Subjt:  LRFDASGHAPPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADVE

Query:  TQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHFPH
        T++ + L PMLFFLN T+   RVWFYK T  H  + VP+FG + QYVI FP+
Subjt:  TQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHFPH

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]2.7e-8465.37Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLV+L NFEPL+DATS LAQI+  AD KFTP  F +IA + SPRFVATLQ+S++ FTNYS+DH H S++ LESFHDA+LDGGS++SMT+HLLE  NQM+
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDA-SGHAPPLHHELILSPSQEEDL---GQVAYGKFFTVHSKELRRIIKELPLFQEDS-VCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGY
        LRF   S   PPLHHEL  SP Q  D    GQ+  GKFF V S+ LRRIIKELP+FQ+DS VCV VTSS+IKFSIASKE        IVL+  HC+IVG+
Subjt:  LRFDA-SGHAPPLHHELILSPSQEEDL---GQVAYGKFFTVHSKELRRIIKELPLFQEDS-VCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGY

Query:  EADVETQLHVVLRPMLFFLNLTYKANRVWFYK-KTNNHSVISVPAFGLFGQYVIHFP
        E +VETQ  ++LRPMLFFLN TYKAN+VWFYK K N++SV++VPAFG+ GQYVI+FP
Subjt:  EADVETQLHVVLRPMLFFLNLTYKANRVWFYK-KTNNHSVISVPAFGLFGQYVIHFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980101.1e-8371.3Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL+ FEPL+DATS+LAQ+AKDAD KFTP M +II S+ SP+FVATLQ+SRR FTN+S+DHN  S++SL+ FHDAMLDGGS+SSMT+HLL+  NQMV
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGH-APPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV
        LRF+   H  PPLHHEL LSP Q E+LGQV YG FFTV S+ELRRIIKELPLF +D+V VTVT S++KFSI SKEIILTKE      GGHCKIVGYE +V
Subjt:  LRFDASGH-APPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV

Query:  ETQLHVVLRPMLFFLNLTYKANR
        ET+L VVLRPM+FFLN TY+AN+
Subjt:  ETQLHVVLRPMLFFLNLTYKANR

A0A1S3CL88 uncharacterized protein LOC1035022503.9e-8162.84Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKD-ADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM
        MFLV+L+NF+PL+DATS LAQI+ D AD KFTP+ F IIASH SPRF+ATLQ+S ++FT +S+D++H S++SLESFHDA+LDGGS++SMT+HLL+  NQM
Subjt:  MFLVRLQNFEPLVDATSILAQIAKD-ADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQM

Query:  VLRFDA-SGHAPPLHHELILSPSQEED--LGQ--VAYGKFFTVHSKELRRIIKELPLFQEDS-VCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIV
        +LRFD  S    PLHHEL LSP Q ED  +GQ  +   K+F V SK LRRIIK+LP+FQ DS + V VT+SR+KFSIASKEIILT       +G HCKI 
Subjt:  VLRFDA-SGHAPPLHHELILSPSQEED--LGQ--VAYGKFFTVHSKELRRIIKELPLFQEDS-VCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIV

Query:  GYEADVETQLHVVLRPMLFFLNLTYKANRVWFYKKTNN-HSVISVPAFGLFGQYVIHFPHV
        G+E +VETQ  ++L PM+FFLN TYKANRVWFYK  NN ++++ VPA+G+FGQYVI+FP V
Subjt:  GYEADVETQLHVVLRPMLFFLNLTYKANRVWFYKKTNN-HSVISVPAFGLFGQYVIHFPHV

A0A6J1H2Z8 uncharacterized protein LOC1114600112.1e-6352.59Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL +F+PL++ATSILAQI+ +AD KF+ + F +I S+ S RFVAT Q+S RFF NY +D NH SR+SL+SF++AM  G  +SSMT+H  E  ++MV
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGHA-PPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV
        L+F++S H    +H  L LSPSQEE+LGQ+ + +FF++ S++ R II  LP F  +S+ V++TSSR+KF  AS+E ILTKE      GG C IVGYE   
Subjt:  LRFDASGHA-PPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV

Query:  ETQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHF
        E    + L P  FF NL+Y A R+WFYK  ++  VI +PAFGL  QYVI+F
Subjt:  ETQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHF

A0A6J1KIW5 uncharacterized protein LOC1114948743.7e-7155.12Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL+NF PLVD TS LAQIA+++D  FTP    +  S  SPRF+ATLQ+  + FT YS++ +H SRISLES HDA+LD GS S+MT+HLLEN N MV
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGHAPPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADVE
        LRF+   H P L H+ +L P QE+ + ++ Y K   + S++LR++IKELPLF  DSVCVTVTSSR++FSIAS+E+I  KE       G C+I+G++ D  
Subjt:  LRFDASGHAPPLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADVE

Query:  TQLHVVLRPMLFFLNLTYKANRVWFYKK-TNNHSVISVPAFGLFGQYVIHFPHV
        T+  +VL PMLFFLNLTY    VWF+K  TN H V+  P F +F QYVI+FP +
Subjt:  TQLHVVLRPMLFFLNLTYKANRVWFYKK-TNNHSVISVPAFGLFGQYVIHFPHV

A0A6J1KZ05 uncharacterized protein LOC1114988871.3e-6553.39Show/hide
Query:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV
        MFLVRL +F+PL +ATS+LAQI+ +AD KF+ + F +I S+ S RFVAT Q+S RFF NYS+D NH SR+SL+SF+DAM DG  +SSMT+H  E  ++MV
Subjt:  MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMV

Query:  LRFDASGHAP-PLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV
        L+F++S H    +H  L LSPSQEE+LGQ+ + +FF++ S++ R II  LP F  +S+ V++TSSR+KF  AS+E ILTKE      GG C I+GYE + 
Subjt:  LRFDASGHAP-PLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADV

Query:  ETQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHF
        E    + L P  FF NL+Y A R+WFYK  ++  VI VPAFGL  QYVI+F
Subjt:  ETQLHVVLRPMLFFLNLTYKANRVWFYKKTNNHSVISVPAFGLFGQYVIHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAGGCTGCAGAACTTTGAACCTCTTGTGGATGCAACCTCCATACTCGCTCAAATCGCCAAGGATGCCGACGCCAAATTCACTCCGACGATGTTCTTGAT
CATCGCCTCGCACAGTTCCCCTCGATTCGTCGCGACGCTGCAGATGTCGCGTCGATTCTTCACGAACTATTCGATCGATCATAATCACGTTTCGAGGATCTCCCTTGAAT
CCTTCCATGATGCCATGTTGGATGGAGGGAGTTACTCTTCAATGACAATGCATCTTCTTGAGAACATAAATCAAATGGTCCTTAGGTTTGATGCTTCAGGGCATGCGCCA
CCGTTGCATCATGAATTGATATTGTCACCTTCACAAGAAGAGGATTTAGGTCAAGTTGCATATGGGAAATTTTTCACAGTTCATTCTAAGGAATTACGACGGATTATAAA
AGAATTACCTCTCTTTCAAGAGGATTCAGTTTGTGTTACGGTAACGAGTTCACGAATCAAGTTCTCGATTGCATCTAAGGAGATTATTCTTACAAAAGAGATAGTGATTG
TTTTGCAGGGTGGACACTGTAAAATCGTAGGTTATGAAGCTGATGTTGAAACACAACTCCATGTTGTTCTTCGTCCCATGTTGTTTTTTTTGAATTTGACGTATAAAGCG
AATAGGGTATGGTTTTATAAGAAAACGAATAATCATAGTGTAATAAGTGTTCCTGCTTTTGGATTGTTTGGACAATATGTGATCCATTTTCCCCATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAGGCTGCAGAACTTTGAACCTCTTGTGGATGCAACCTCCATACTCGCTCAAATCGCCAAGGATGCCGACGCCAAATTCACTCCGACGATGTTCTTGAT
CATCGCCTCGCACAGTTCCCCTCGATTCGTCGCGACGCTGCAGATGTCGCGTCGATTCTTCACGAACTATTCGATCGATCATAATCACGTTTCGAGGATCTCCCTTGAAT
CCTTCCATGATGCCATGTTGGATGGAGGGAGTTACTCTTCAATGACAATGCATCTTCTTGAGAACATAAATCAAATGGTCCTTAGGTTTGATGCTTCAGGGCATGCGCCA
CCGTTGCATCATGAATTGATATTGTCACCTTCACAAGAAGAGGATTTAGGTCAAGTTGCATATGGGAAATTTTTCACAGTTCATTCTAAGGAATTACGACGGATTATAAA
AGAATTACCTCTCTTTCAAGAGGATTCAGTTTGTGTTACGGTAACGAGTTCACGAATCAAGTTCTCGATTGCATCTAAGGAGATTATTCTTACAAAAGAGATAGTGATTG
TTTTGCAGGGTGGACACTGTAAAATCGTAGGTTATGAAGCTGATGTTGAAACACAACTCCATGTTGTTCTTCGTCCCATGTTGTTTTTTTTGAATTTGACGTATAAAGCG
AATAGGGTATGGTTTTATAAGAAAACGAATAATCATAGTGTAATAAGTGTTCCTGCTTTTGGATTGTTTGGACAATATGTGATCCATTTTCCCCATGTTTGA
Protein sequenceShow/hide protein sequence
MFLVRLQNFEPLVDATSILAQIAKDADAKFTPTMFLIIASHSSPRFVATLQMSRRFFTNYSIDHNHVSRISLESFHDAMLDGGSYSSMTMHLLENINQMVLRFDASGHAP
PLHHELILSPSQEEDLGQVAYGKFFTVHSKELRRIIKELPLFQEDSVCVTVTSSRIKFSIASKEIILTKEIVIVLQGGHCKIVGYEADVETQLHVVLRPMLFFLNLTYKA
NRVWFYKKTNNHSVISVPAFGLFGQYVIHFPHV