CuGenDBv2

Gene ID	Spg023733
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNA polymerase sigma factor
Genome location	scaffold13:7079717..7084806
RNA-Seq Expression	Spg023733
Synteny	Spg023733
Gene Ontology terms	GO:0071482 - cellular response to light stimulus (biological process) GO:2000142 - regulation of DNA-templated transcription, initiation (biological process) GO:0009507 - chloroplast (cellular component) GO:0003677 - DNA binding (molecular function) GO:0016987 - sigma factor activity (molecular function)
InterPro domains	IPR000943 - RNA polymerase sigma-70 IPR007624 - RNA polymerase sigma-70 region 3 IPR007627 - RNA polymerase sigma-70 region 2 IPR007630 - RNA polymerase sigma-70 region 4 IPR009042 - RNA polymerase sigma-70 region 1.2 IPR013324 - RNA polymerase sigma factor, region 3/4-like IPR013325 - RNA polymerase sigma factor, region 2 IPR014284 - RNA polymerase sigma-70 like domain IPR016262 - RNA polymerase sigma factor, SigB/C/D/F, plastid IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004154029.1 RNA polymerase sigma factor sigB [Cucumis sativus]

2.0e-292

92.67

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFK       T ANYSHH SFLPTA SSYT+VRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVS ERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEA+IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQSSPK DALHFKWAQFMESERADIIGEPVGVN RP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S  ESDDMEP SEELELLQDELS+SI V+SKRQTERKARRTRAAEKT TSV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL  ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        EAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

XP_008460092.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo]

3.4e-292

92.84

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFK       T AN SHH SF+PTA SSYT+VRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVS ERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQ SPK DALHFKWAQFMESERADIIGEPVGVN RP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S  ESDD+EP S+ELELLQDELS+SI V+SKRQTERKARRTRAAEKT TSVV  KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        EAET+ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

XP_022155781.1 RNA polymerase sigma factor sigB [Momordica charantia]

6.7e-296

93.53

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFKTTAIT+TTTANYSHH +FLPTANSS T+VRDPHSLRTQCILSAASP TSTGTATT NV+RLKLPP D NTDS+SAERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSS+TG KSQSS KSDALHFKW QFMESERADIIG PVGVNNRPAEGDAL+
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
        H  AESD  +P +EELELLQDELS +IAVRS+RQTER+A+RTRAAEK  TSVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

XP_022964550.1 RNA polymerase sigma factor sigB [Cucurbita moschata]

4.5e-284

90.27

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFKT A TIT T   SHH +FLPTANS+Y + RDPHSLRTQCILSAASPPT TGTATT NVDRLKLPPFDTNTDSVSAERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNSSR+ TKSQSS +S+ALHFKW QFMESERADIIGEPVGVNNRP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S AESDDMEP SEELELL+DE SKSIAVRS RQTERKARRTRA+EK  TSVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRSLEQK GINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
        EA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM

XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida]

4.8e-294

93.2

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYS-HHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLR
        MSCLLPQFKCHPETFSIQFK       T ANY+ HH +FLPTANSSYT+VRDPHSLRTQCILSAASPPTSTGTATTLNVDRL LPPFDTNTDSVS ERLR
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYS-HHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLR

Query:  SYLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDAL
        SYLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVKVA+DAALL NNSNSSR G KS+SSP+ DALHFKWAQFMESERADIIGEPVGVNNRP E DAL
Subjt:  SYLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDAL

Query:  EHSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELS
        + S  +SDDMEP SEELELLQDELS+SI VRSKRQTERKARRTRAAEKT TSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTA EELELS
Subjt:  EHSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELS

Query:  EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
        EGIQDLLKLERLQEELA+RYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Subjt:  EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF

Query:  KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
        KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
Subjt:  KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD

Query:  PEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        PEAET+ED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL+S
Subjt:  PEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K917 RNA polymerase sigma factor

9.7e-293

92.67

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFK       T ANYSHH SFLPTA SSYT+VRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVS ERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEA+IAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQSSPK DALHFKWAQFMESERADIIGEPVGVN RP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S  ESDDMEP SEELELLQDELS+SI V+SKRQTERKARRTRAAEKT TSV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL  ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        EAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

A0A1S3CD00 RNA polymerase sigma factor

1.7e-292

92.84

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFK       T AN SHH SF+PTA SSYT+VRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVS ERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DAALL NN NSSR GTKSQ SPK DALHFKWAQFMESERADIIGEPVGVN RP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S  ESDD+EP S+ELELLQDELS+SI V+SKRQTERKARRTRAAEKT TSVV  KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        EAET+ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

A0A6J1DSR7 RNA polymerase sigma factor

3.2e-296

93.53

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFKTTAIT+TTTANYSHH +FLPTANSS T+VRDPHSLRTQCILSAASP TSTGTATT NV+RLKLPP D NTDS+SAERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSS+TG KSQSS KSDALHFKW QFMESERADIIG PVGVNNRPAEGDAL+
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
        H  AESD  +P +EELELLQDELS +IAVRS+RQTER+A+RTRAAEK  TSVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

A0A6J1HL45 RNA polymerase sigma factor sigB

2.2e-284

90.27

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFKT A TIT T   SHH +FLPTANS+Y + RDPHSLRTQCILSAASPPT TGTATT NVDRLKLPPFDTNTDSVSAERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNSSR+ TKSQSS +S+ALHFKW QFMESERADIIGEPVGVNNRP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S AESDDMEP SEELELL+DE SKSIAVRS RQTERKARRTRA+EK  TSVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRSLEQK GINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
        EA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM

A0A6J1KM29 RNA polymerase sigma factor

4.1e-283

90.44

Show/hide

Query:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS
        MSCLLPQFKCHPETFSIQFKT AITIT T   SHH +FLPTANS+Y +VRDPHSLRTQCILSAA   TSTGTATT NVDRLKLPPFDTNTDSVSAERLRS
Subjt:  MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRS

Query:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE
        YLGAVESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNS+R+ TKSQSS KS+ALHFKW QFMESERADIIGEPVGVNNRP EGDALE
Subjt:  YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALE

Query:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
         S AESDDMEP SEELELLQDE SKSIAVRS RQTERKARRTRA+EK  TSVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt:  HSIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE

Query:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
        GIQDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt:  GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK

Query:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
        FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P DEEIA AAGLSMKRLA VLMTPKAPRSLEQK GINQNLKPSEVISDP
Subjt:  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP

Query:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
        EA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Subjt:  EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM

SwissProt top hits

e value

%identity

Alignment

O22056 RNA polymerase sigma factor sigB

2.2e-188

63.94

Show/hide

Query:  SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRSY
        SCLLPQFKC P++FSI F+T               SF    ++  +    P     QC +S  SP   T   + L+V +L+LP FDT++DS+ ++R  +Y
Subjt:  SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRSY

Query:  LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNR
                    +E+  + TLLTS+EA + AAAAEAV LA+AAVKVAKDA L   NSN++   T S +  +S     KW QF E ERA I+G  + V++ 
Subjt:  LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNR

Query:  PAEGDALEHSIAESD---DME-PKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
            D +  S +  +   D+E  K EE+ELL+++ S S+AVRS RQTERKARR +  EKT + + S+K+GSS +KKR   QEVD++DPLRYLR TTS+S+
Subjt:  PAEGDALEHSIAESD---DME-PKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR

Query:  LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
        LLT  EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Subjt:  LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR

Query:  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
        GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL AVL++PK PRSL+QKIG+N
Subjt:  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN

Query:  QNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        QNLKPSEVI+DPEA TSED+LIK+FM+QDL+KVLDSL  RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR  HLQQYL++
Subjt:  QNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

P26683 RNA polymerase sigma factor SigA

1.3e-76

46.39

Show/hide

Query:  KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKM
        KSG +++ +R +  +  +   D +R         RLL A EE+EL+  I DLL+LER++E L+E+   +P  ++WA A  +     R RL+ G   KDKM
Subjt:  KSGSSSRKKRNSLQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKM

Query:  IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
        ++SN+RLV+SIAK Y   G++ QDL+QEG  GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K L  E GR P 
Subjt:  IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD

Query:  DEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
        +EEIA    +++++L  +  + + P SLE  IG  ++ +  + I + + ET ED + K  +++DLEKVLDSL+PRER V+R R+G++DGRMKTL+EIG+I
Subjt:  DEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI

Query:  MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
          V+RERIRQIE+ A RKL++  R   L++Y+
Subjt:  MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL

P38023 RNA polymerase sigma factor SigA1

3.3e-72

41.06

Show/hide

Query:  SIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSL-------------KSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
        SI +  +    ++  ELL D   K    ++KR + +KA  T A  +  T++                +   ++ K +  +++    D +R         R
Subjt:  SIAESDDMEPKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSL-------------KSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR

Query:  LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
        LL A EE+EL+  I DLL LER+++EL E+    P+ A+WAAA        R+RL  G   KDKM++SN+RLV+SIAK Y   G++ QDL+QEG  GL+R
Subjt:  LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR

Query:  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
         AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K L  E GR P +EEIA    +++++L  +  + + P SLE  IG  
Subjt:  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN

Query:  QNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
        ++ +  + I + + ET ED + K  +++DLE VL +L+PRER V+R R+G++DGRMKTL+EIG++  V+RERIRQIE+ A RKL++  R   L++Y+
Subjt:  QNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL

P52322 RNA polymerase sigma factor SigA

1.9e-67

40.44

Show/hide

Query:  SSRKKRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEE----------------------LAERYGNEPTFA----------
        +S ++R++ ++  Y+ D +R         RLL A EE+EL+  I DLLKLER++E+                      + E+   EP  +          
Subjt:  SSRKKRNSLQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEE----------------------LAERYGNEPTFA----------

Query:  -------QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
               +W A +       ++RL +G   K+KM++SN+RLV+SIAK Y   G++ QDL+QEG  GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++D
Subjt:  -------QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD

Query:  QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLE
        QSRTIRLP H+ E   R+K+  K L  E  R P +EEIA    +++++L  +  + + P SLE  IG  ++ +  + I + + ET ED + K  +++DLE
Subjt:  QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLE

Query:  KVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
         VLD+L+PRER V+R R+G++DGRMKTL+EIG+I  V+RERIRQIE+ A RKL++  R   L++Y+
Subjt:  KVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL

Q9LD95 RNA polymerase sigma factor sigF, chloroplastic

8.8e-65

Show/hide

Query:  KSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPT
        K   VRSKRQ ER+A+  RA +             +S KK+   Q  D  D L+       T +LLTA EE EL   IQ LLKLE+++ +L  + G EPT
Subjt:  KSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPT

Query:  FAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI
          +WA A G++   L+  ++ G   ++K+I +N+RLV+ IAK YQ  G+N QDL+QEG  GL++  EKF    G +F+TYA+WWI+Q++RKS+   SRTI
Subjt:  FAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI

Query:  RLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDS
        RLP ++     +V EARK    E    P  EE+A   G+S ++L  +L   + P S++Q I  +Q+    E+  D   ET    + KQ M+  +  +L+ 
Subjt:  RLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDS

Query:  LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
        L+P+ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A  +LK    +  L  Y
Subjt:  LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY

Arabidopsis top hits

e value

%identity

Alignment

AT1G08540.1 RNApolymerase sigma subunit 2

1.5e-189

63.94

Show/hide

Query:  SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRSY
        SCLLPQFKC P++FSI F+T               SF    ++  +    P     QC +S  SP   T   + L+V +L+LP FDT++DS+ ++R  +Y
Subjt:  SCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRSY

Query:  LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNR
                    +E+  + TLLTS+EA + AAAAEAV LA+AAVKVAKDA L   NSN++   T S +  +S     KW QF E ERA I+G  + V++ 
Subjt:  LGA---------VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNR

Query:  PAEGDALEHSIAESD---DME-PKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR
            D +  S +  +   D+E  K EE+ELL+++ S S+AVRS RQTERKARR +  EKT + + S+K+GSS +KKR   QEVD++DPLRYLR TTS+S+
Subjt:  PAEGDALEHSIAESD---DME-PKSEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSR

Query:  LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
        LLT  EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Subjt:  LLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR

Query:  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN
        GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL AVL++PK PRSL+QKIG+N
Subjt:  GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGIN

Query:  QNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
        QNLKPSEVI+DPEA TSED+LIK+FM+QDL+KVLDSL  RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR  HLQQYL++
Subjt:  QNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

AT1G64860.1 sigma factor A

2.7e-37

30.83

Show/hide

Query:  LEHSIAESDDMEPKSEELELLQDE--------LSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRN-----SLQEVDYSDPLR-YLRATT
        LE    + DD+   S E  LL  +        LS   AV S+   +   R+ +    T + + + +    ++KK N     ++ +V     +R Y++   
Subjt:  LEHSIAESDDMEPKSEELELLQDE--------LSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRN-----SLQEVDYSDPLR-YLRATT

Query:  STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
        S   +L+  E + LS+ I+  L+L+  +  L +R G EP+  Q A +  +++  L+  L      ++K+  SN+RLV+SIA+ Y   G  + DLVQ G  
Subjt:  STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR

Query:  GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
        GL+RG EKFD+SKGF+ STY +WWI+Q V ++L D SRT+RLP H+ E    ++ A+ +L  E G  P  + IAE+  +S K++           SL++ 
Subjt:  GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK

Query:  IGINQNLKPSEV----ISDPEAETS-----EDLLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN
           + N  P E     I+D   E +     +DL     +K+++ K++  +L  RE+++IR  +G+ D    T ++I + +G+SRER+RQ+   A  KLK+
Subjt:  IGINQNLKPSEV----ISDPEAETS-----EDLLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN

Query:  KKRTKHLQQYLM
          R + ++  ++
Subjt:  KKRTKHLQQYLM

AT2G36990.1 RNApolymerase sigma-subunit F

6.2e-66

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Query:  KSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPT
        K   VRSKRQ ER+A+  RA +             +S KK+   Q  D  D L+       T +LLTA EE EL   IQ LLKLE+++ +L  + G EPT
Subjt:  KSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPT

Query:  FAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI
          +WA A G++   L+  ++ G   ++K+I +N+RLV+ IAK YQ  G+N QDL+QEG  GL++  EKF    G +F+TYA+WWI+Q++RKS+   SRTI
Subjt:  FAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI

Query:  RLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDS
        RLP ++     +V EARK    E    P  EE+A   G+S ++L  +L   + P S++Q I  +Q+    E+  D   ET    + KQ M+  +  +L+ 
Subjt:  RLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDS

Query:  LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
        L+P+ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A  +LK    +  L  Y
Subjt:  LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY

AT3G53920.1 RNApolymerase sigma-subunit C

6.5e-55

33.69

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Query:  SEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQ
        S+  EL+    ++ + V S+R+ ++KARR+    + G    SL  G   R   N++       P +Y +     SR      E E+S G++ +  +ER++
Subjt:  SEELELLQDELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQ

Query:  EELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA
         +L E  G   + + WAAAAG+N++ L + L+YG +C+D+++KS   LV+ +A+NY+G G+  +DL+Q G  G+++GAE+FD ++G+KFSTY  +WI+++
Subjt:  EELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA

Query:  VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIK
        +   +S  +R + +P  ++     +++ARK L + +G ++  DEEIA+  G S+K++ A     K   S+++K+G     K  E   D   E+ E+ +++
Subjt:  VRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIK

Query:  QFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
        Q  ++D+  +L+ L PRE+QV+  R+G++D R K+L+EIG+++ VS+E IR+IE  A  KL+++   + L+ YL
Subjt:  QFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL

AT5G13730.1 sigma factor 4

2.5e-46

35.97

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Query:  STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
        S S  L+  EE++L   +++  KLE L   + E   NE      A+  G  +R+  + L      ++K+ +   RLV+SIA  YQG G+NLQDL+QEG  
Subjt:  STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR

Query:  GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
        GL+RGAE+FD  +G+K STY +WWIKQA+ ++++ +SR ++LP  M E T +V EA   L  +  R P  EEIAE   L++  +   +   ++P SL++ 
Subjt:  GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK

Query:  IGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
           N  +   E++  P+    E+++ ++ MK ++E++L SL  RE +V+   FG+      + +EIG+ + +SRER+RQI   A +KL+N      L+ Y
Subjt:  IGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY

Query:  LMS
          S
Subjt:  LMS

Sequences

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CDS sequence

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ATGTCGTGTTTACTTCCCCAATTCAAGTGCCATCCTGAAACATTCTCAATCCAATTTAAGACCACGGCCATCACGATTACAACCACGGCTAATTATTCTCACCATCAAAG
CTTTCTTCCCACTGCCAATTCCAGTTACACTAGAGTCAGAGATCCCCATAGTTTACGGACACAATGTATCTTGTCTGCAGCATCACCACCAACATCGACTGGAACAGCTA
CAACATTGAATGTGGATCGACTTAAATTGCCTCCTTTTGATACTAACACCGACTCAGTCTCTGCAGAAAGACTAAGATCATATCTAGGTGCAGTTGAATCGAGCCTAGCC
TCAACTCTTCTTACCAGTGAGGAGGCTACGATAGCAGCTGCCGCAGCTGAGGCAGTTACTCTTGCAAAAGCAGCTGTCAAGGTTGCAAAGGATGCAGCTCTTCTGGTTAA
TAACAGCAACTCTTCCAGAACAGGAACAAAATCTCAATCTTCTCCCAAATCTGATGCTTTACATTTCAAGTGGGCTCAATTTATGGAATCCGAAAGGGCCGATATAATAG
GAGAGCCAGTTGGAGTTAATAATCGCCCTGCGGAAGGTGATGCTTTGGAACACAGCATAGCAGAATCTGATGACATGGAGCCAAAATCTGAAGAACTTGAACTTTTACAG
GATGAACTCTCTAAGAGTATAGCTGTAAGATCAAAGCGTCAAACAGAACGAAAAGCCAGAAGAACTAGAGCAGCAGAGAAGACTGGTACTAGTGTAGTGTCATTGAAGTC
TGGTTCTAGCAGCCGAAAGAAGCGTAATTCTTTACAAGAAGTGGACTACTCTGACCCATTGCGTTATTTAAGAGCAACTACCAGCACTTCTAGACTTCTTACCGCAACTG
AAGAACTTGAACTGTCAGAAGGAATTCAGGACTTACTGAAACTAGAAAGGCTCCAGGAGGAGCTTGCAGAACGGTATGGGAACGAGCCAACCTTTGCTCAATGGGCAGCT
GCGGCTGGAGTCAATCAGAGGACGCTGAGAAAGCGTCTAAACTATGGTACTTTTTGTAAGGACAAAATGATAAAAAGCAACATTCGTCTTGTCATTTCGATTGCGAAAAA
TTATCAGGGAGCTGGGATGAATCTCCAGGATCTAGTTCAGGAAGGATGTCGAGGTCTTGTACGAGGTGCAGAGAAGTTTGATGCTTCAAAAGGCTTCAAGTTTTCAACCT
ATGCTCATTGGTGGATAAAGCAGGCGGTTCGGAAATCTCTTTCTGATCAGTCCAGGACTATTCGCTTGCCATTTCACATGGTGGAAGCAACTTATAGGGTGAAGGAGGCT
AGAAAGCAATTATACAGTGAGAATGGAAGACATCCTGATGATGAAGAAATTGCCGAAGCAGCCGGGCTGTCGATGAAGAGGCTTGCTGCAGTATTAATGACTCCGAAAGC
ACCCCGATCGCTAGAGCAGAAAATCGGGATCAACCAAAATCTCAAACCTTCGGAAGTCATTTCCGACCCCGAAGCGGAAACTTCAGAAGATCTTCTGATAAAACAATTCA
TGAAGCAGGATCTCGAAAAGGTACTCGACTCCCTTAATCCAAGAGAGAGACAAGTAATTAGATGGAGGTTTGGGATGGAAGATGGCAGGATGAAAACATTGCAGGAAATA
GGAGAAATAATGGGTGTAAGTAGGGAAAGAATTAGACAAATTGAGTCATGTGCTTTCAGAAAACTCAAAAACAAGAAGAGAACTAAACATTTGCAGCAGTATCTGATGTC
ATGA

mRNA sequence

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Protein sequence

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MSCLLPQFKCHPETFSIQFKTTAITITTTANYSHHQSFLPTANSSYTRVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLA
STLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSRTGTKSQSSPKSDALHFKWAQFMESERADIIGEPVGVNNRPAEGDALEHSIAESDDMEPKSEELELLQ
DELSKSIAVRSKRQTERKARRTRAAEKTGTSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAA
AAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA
RKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEI
GEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS

Spg023733 (gene) of Sponge gourd (cylindrica) v1 genome