; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023738 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023738
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold13:938290..942093
RNA-Seq ExpressionSpg023738
SyntenySpg023738
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-2133.47Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D  Q+LN+CN  +  ME +HYMYD+PI P    RRR + ++      +  H      +
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHN----VEDMPPF--TQTQDGAGPSTPV-------------MTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVY--------------
          PP+   +  HN    V  MP F  T    G G S+                     ++D  + PSSS  HG GRGRG+H +Y+Y              
Subjt:  PFPPVIPEEFHHN----VEDMPPF--TQTQDGAGPSTPV-------------MTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVY--------------

Query:  --------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH
                P +  E+ ++E  E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  --------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]2.7e-3753.85Show/hide
Query:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNDRSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALP
        M DK LGF+L +NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+++R + ++I+YRHP+++P G +RFMP  I N QAM  MFSIA+P
Subjt:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNDRSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALP

Query:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVA
        + N+VHLYVNV R+  +     +   Q  + +Q I P+ E VA
Subjt:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVA

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.2e-2535.74Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y+ WY NITR +ITR GA+ G++ +   R+RD+++D+ Q L++CN+ +  ME++H MYD+PI PP            PV       E   +  
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGRGEHAQYVY---------PTE
               ++ +HNVE++P  TQTQ   G   P T + T    + D+E G                  PS+S  HG  RG GEH +Y+Y           E
Subjt:  PFPPVIPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGRGEHAQYVY---------PTE

Query:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
          +EP  +ED +    ++RRRQP RNRRRP CGTH
Subjt:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-2334.22Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y++WY+NI++ +IT+ GA     RS   R+R++++D  Q+LN+CN  +  ME +HYMYD+PI P    RRR +                 VQE
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHDYEAG-------------------------------PSSSSAHGRGRGRGEHAQYV
        P      EE   + E++PP TQTQ      +PVM +P    +++D E G                               PSSS  HG GRGRGEH +Y+
Subjt:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHDYEAG-------------------------------PSSSSAHGRGRGRGEHAQYV

Query:  Y---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRRPPCGTH
        Y   P  + E+  E                     +E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  Y---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRRPPCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.2e-2535.74Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y+  Y NITR +ITR GA  G  RS   R+RD+  D  Q+L++CN+ +  ME++H +YD+PI PP   R R   E+  +              
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAHGRGRGRGEHAQYVY---PT------E
               +E +HNVE++PP TQTQ   G  +P+  +P     Y                     + GPS+S  +G GRG GEH +Y+Y   PT      E
Subjt:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAHGRGRGRGEHAQYVY---PT------E

Query:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
          +EP+ +ED +    ++RRRQPARNR+   CGTH
Subjt:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7THR5 Uncharacterized protein1.3e-3753.85Show/hide
Query:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNDRSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALP
        M DK LGF+L +NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+++R + ++I+YRHP+++P G +RFMP  I N QAM  MFSIA+P
Subjt:  MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNDRSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALP

Query:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVA
        + N+VHLYVNV R+  +     +   Q  + +Q I P+ E VA
Subjt:  VPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVA

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.5e-2535.74Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y+ WY NITR +ITR GA+ G++ +   R+RD+++D+ Q L++CN+ +  ME++H MYD+PI PP            PV       E   +  
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGRGEHAQYVY---------PTE
               ++ +HNVE++P  TQTQ   G   P T + T    + D+E G                  PS+S  HG  RG GEH +Y+Y           E
Subjt:  PFPPVIPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGRGEHAQYVY---------PTE

Query:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
          +EP  +ED +    ++RRRQP RNRRRP CGTH
Subjt:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-2334.22Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y++WY+NI++ +IT+ GA     RS   R+R++++D  Q+LN+CN  +  ME +HYMYD+PI P    RRR +                 VQE
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHDYEAG-------------------------------PSSSSAHGRGRGRGEHAQYV
        P      EE   + E++PP TQTQ      +PVM +P    +++D E G                               PSSS  HG GRGRGEH +Y+
Subjt:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHDYEAG-------------------------------PSSSSAHGRGRGRGEHAQYV

Query:  Y---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRRPPCGTH
        Y   P  + E+  E                     +E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  Y---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRRPPCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein5.8e-2233.47Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D  Q+LN+CN  +  ME +HYMYD+PI P    RRR + ++      +  H      +
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHN----VEDMPPF--TQTQDGAGPSTPV-------------MTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVY--------------
          PP+   +  HN    V  MP F  T    G G S+                     ++D  + PSSS  HG GRGRG+H +Y+Y              
Subjt:  PFPPVIPEEFHHN----VEDMPPF--TQTQDGAGPSTPV-------------MTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVY--------------

Query:  --------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH
                P +  E+ ++E  E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  --------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-1652.58Show/hide
Query:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP
        M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  ISN Q M+ MFSIALP PN+VHLYV V  + D A N    P       + +D EPES APP
Subjt:  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.5e-2535.74Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE
        D D+  +Y+  Y NITR +ITR GA  G  RS   R+RD+  D  Q+L++CN+ +  ME++H +YD+PI PP   R R   E+  +              
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYDIPIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQE

Query:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAHGRGRGRGEHAQYVY---PT------E
               +E +HNVE++PP TQTQ   G  +P+  +P     Y                     + GPS+S  +G GRG GEH +Y+Y   PT      E
Subjt:  PFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAHGRGRGRGEHAQYVY---PT------E

Query:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
          +EP+ +ED +    ++RRRQPARNR+   CGTH
Subjt:  LVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGA
TCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCAC
CATTAGGATCAGTTAGATTTATGCCAATATCTATCTCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAAT
GTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGA
TGCAAGTTCTCCAATAGATGCTGATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAG
CGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACGACATA
CCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACATGAGCATATTCCAGTCCAGGAGCCTTTCCCACC
AGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGC
ATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCTAGGGAA
GAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGCACACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGA
TCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCAC
CATTAGGATCAGTTAGATTTATGCCAATATCTATCTCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAAT
GTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGA
TGCAAGTTCTCCAATAGATGCTGATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAG
CGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACGACATA
CCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACATGAGCATATTCCAGTCCAGGAGCCTTTCCCACC
AGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGC
ATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCTAGGGAA
GAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGCACACATTAG
Protein sequenceShow/hide protein sequence
MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNDRSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISISNNQAMDLMFSIALPVPNVVHLYVN
VRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPPCDASSPIDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDMQILNLCNSGDANMEQLHYMYDI
PIAPPHGPRRRRVYEDVPVQPHITVHEHIPVQEPFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVYPTELVEEPRE
EEDPDDQVPRARRRQPARNRRRPPCGTH