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Spg023740 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023740
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein Ycf2-like
Genome locationscaffold13:3509290..3514913
RNA-Seq ExpressionSpg023740
SyntenySpg023740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051301.1 uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa]1.4e-2041.81Show/hide
Query:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSV---SYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRL
        KF ++EFE IT LNCG +  VD S + G+FL+KYF NE  +    Y   I S+K SIKN  ALV G+  F Y+LLV  YECI LL  P+ + A  V    
Subjt:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSV---SYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRL

Query:  PKMKNWKLDVHPEWRDLALK------FSFCPM----TVEQLFDMDKGMNEESENVGVENVGECSKRNEEEGQTKNDH
          M NW +D HPEW+DLA K      F F  M     VE++   +  M EE+   G  + GE S + E   +   D+
Subjt:  PKMKNWKLDVHPEWRDLALK------FSFCPM----TVEQLFDMDKGMNEESENVGVENVGECSKRNEEEGQTKNDH

KGN48800.2 hypothetical protein Csa_003918 [Cucumis sativus]7.7e-1631.12Show/hide
Query:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS
        KNT   + +KK  K         K+SK   +   +  ++    +NR   W     +I  KFG+++F LITGLNCG++ A+D SK+  G+F  +YFG E++
Subjt:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS

Query:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY
                                                                        +SYE T+  VK SIK++ A   G+ GFPYALLVWAY
Subjt:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY

Query:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK
        E I LL   + + A  +S   P+M NW   VHPEW+DL+ K
Subjt:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK

XP_022132727.1 uncharacterized protein LOC111005524 [Momordica charantia]7.5e-1932.51Show/hide
Query:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNK-YFGNERS-----------------------------------------------------------
        KFG+++F LITG+NCG++  +D SK+   + +K YFG ER+                                                           
Subjt:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNK-YFGNERS-----------------------------------------------------------

Query:  -----VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALKF----SFCPMTVEQLFDM
             VSYE TI  VK +IK++ A   G+ GFPYALLVWAYE I LL   +  +A+ +S+ +P+M NW  +VHPEWRDL+ K     SF    +E   D 
Subjt:  -----VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALKF----SFCPMTVEQLFDM

Query:  DKGMNEESENV-GVENVGECSKRNEEEGQTKNDHRQGNKQAED
        + GM   S  V GVE   + SK   ++ Q  +     NK  +D
Subjt:  DKGMNEESENV-GVENVGECSKRNEEEGQTKNDHRQGNKQAED

XP_031743197.1 uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]7.7e-1631.12Show/hide
Query:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS
        KNT   + +KK  K         K+SK   +   +  ++    +NR   W     +I  KFG+++F LITGLNCG++ A+D SK+  G+F  +YFG E++
Subjt:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS

Query:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY
                                                                        +SYE T+  VK SIK++ A   G+ GFPYALLVWAY
Subjt:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY

Query:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK
        E I LL   + + A  +S   P+M NW   VHPEW+DL+ K
Subjt:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK

XP_031743208.1 uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus]7.7e-1631.12Show/hide
Query:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS
        KNT   + +KK  K         K+SK   +   +  ++    +NR   W     +I  KFG+++F LITGLNCG++ A+D SK+  G+F  +YFG E++
Subjt:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS

Query:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY
                                                                        +SYE T+  VK SIK++ A   G+ GFPYALLVWAY
Subjt:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY

Query:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK
        E I LL   + + A  +S   P+M NW   VHPEW+DL+ K
Subjt:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK

TrEMBL top hitse value%identityAlignment
A0A0A0KI50 TF-B3 domain-containing protein3.7e-1631.12Show/hide
Query:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS
        KNT   + +KK  K         K+SK   +   +  ++    +NR   W     +I  KFG+++F LITGLNCG++ A+D SK+  G+F  +YFG E++
Subjt:  KNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKL-SGRFLNKYFGNERS

Query:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY
                                                                        +SYE T+  VK SIK++ A   G+ GFPYALLVWAY
Subjt:  ----------------------------------------------------------------VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAY

Query:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK
        E I LL   + + A  +S   P+M NW   VHPEW+DL+ K
Subjt:  ECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK

A0A1S3B181 uncharacterized protein LOC103484737 isoform X71.7e-1326.82Show/hide
Query:  IDAKGKKEEYAKGEDELSNTSNKTDILD-DQDERMEDVCEGGQEEDEHIEVRGGETNEEDIEWKSINENVIGVDGGRFDEEV-----------HDKVTRQ
        + A  KK++      E+   + +T  +D DQD R        ++  E  + +GG    +    K  N++ +       D+EV               +  
Subjt:  IDAKGKKEEYAKGEDELSNTSNKTDILD-DQDERMEDVCEGGQEEDEHIEVRGGETNEEDIEWKSINENVIGVDGGRFDEEV-----------HDKVTRQ

Query:  NSSALYTGKDGPEEMLKKNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHS
            LY+  D     + KNT   + +KK  K         KVSK   +   +  ++    +NR   W     +I  KFG+++F LITGLNCG++ A+D S
Subjt:  NSSALYTGKDGPEEMLKKNTPPTKTVKKENK---------KVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHS

Query:  KL-SGRFLNKYFGNERS----------------------------------------------------------------VSYETTIKSVKNSIKNHGA
        K+  G+F  +YFG E++                                                                +SYE TI  VK +IK++ A
Subjt:  KL-SGRFLNKYFGNERS----------------------------------------------------------------VSYETTIKSVKNSIKNHGA

Query:  LVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK
           G+ GFP+AL VWAYE I LL   + ++A  +S   P+M NW  DVHPEW+DL+ K
Subjt:  LVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALK

A0A5A7UCM5 Uncharacterized protein6.6e-2141.81Show/hide
Query:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSV---SYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRL
        KF ++EFE IT LNCG +  VD S + G+FL+KYF NE  +    Y   I S+K SIKN  ALV G+  F Y+LLV  YECI LL  P+ + A  V    
Subjt:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSV---SYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRL

Query:  PKMKNWKLDVHPEWRDLALK------FSFCPM----TVEQLFDMDKGMNEESENVGVENVGECSKRNEEEGQTKNDH
          M NW +D HPEW+DLA K      F F  M     VE++   +  M EE+   G  + GE S + E   +   D+
Subjt:  PKMKNWKLDVHPEWRDLALK------FSFCPM----TVEQLFDMDKGMNEESENVGVENVGECSKRNEEEGQTKNDH

A0A5A7UZA2 DUF1985 domain-containing protein4.6e-1430Show/hide
Query:  KENKKVSKKQGKKGTNRRK-KNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSVS-----------------
        +++  ++K++  +G  +RK K  +  N    W      I  KFG+R+FE ITGLNC  +  VD+SK+ G+FL+KYF NE  +S                 
Subjt:  KENKKVSKKQGKKGTNRRK-KNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSVS-----------------

Query:  -----------------------------------------------YETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVST
                                                       Y   I S+K SIKN  AL  G+ GF Y+LLVW Y+C+ LLI P+ + A  +  
Subjt:  -----------------------------------------------YETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVST

Query:  RLPKMKNWKLDVHPEWRDLA
            + NW ++ HPEW++LA
Subjt:  RLPKMKNWKLDVHPEWRDLA

A0A6J1BX50 uncharacterized protein LOC1110055243.6e-1932.51Show/hide
Query:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNK-YFGNERS-----------------------------------------------------------
        KFG+++F LITG+NCG++  +D SK+   + +K YFG ER+                                                           
Subjt:  KFGLREFELITGLNCGDVSAVDHSKLSGRFLNK-YFGNERS-----------------------------------------------------------

Query:  -----VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALKF----SFCPMTVEQLFDM
             VSYE TI  VK +IK++ A   G+ GFPYALLVWAYE I LL   +  +A+ +S+ +P+M NW  +VHPEWRDL+ K     SF    +E   D 
Subjt:  -----VSYETTIKSVKNSIKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALKF----SFCPMTVEQLFDM

Query:  DKGMNEESENV-GVENVGECSKRNEEEGQTKNDHRQGNKQAED
        + GM   S  V GVE   + SK   ++ Q  +     NK  +D
Subjt:  DKGMNEESENV-GVENVGECSKRNEEEGQTKNDHRQGNKQAED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCCGACGGACTTCTCCATTGTATCGTTTAGGGCTTCGTCTTCTTCACGGCGACAATCTGGTGGGTTTCACGGCGAAGTAAGTACGGTGAAGATAAAACAGAT
CCCAGATAGAGACGTAAGGAGCCAAAGGCTTCTTGGAAGCTCGACAAGGCGACCCAAAAATAAATCGAAAGAGAACGAAATTGTTACAATTTCAATTTCTGAGGGTGAAA
GTTCGGATAGCGTTGATTACCCGATGAACGTGGATGAAGGAACCCCTTCGAGGTCCAACATTTTCAACCGAATAGTTGGAAATGTTGGTAGAATGTTAAGTGCAATAGCC
TCAACCAAGAGACAACTTTTTGGGGATGAGGAAATTATTGATGCTAAAGGGAAAAAGGAAGAATATGCCAAGGGTGAAGATGAATTGTCGAACACCTCAAACAAGACAGA
TATTCTGGATGATCAAGACGAACGAATGGAAGATGTTTGTGAAGGAGGACAAGAGGAAGATGAACACATCGAAGTAAGAGGCGGGGAAACAAATGAAGAAGATATTGAGT
GGAAATCTATCAATGAAAATGTAATTGGGGTCGATGGAGGGCGATTTGATGAAGAAGTACATGATAAGGTGACAAGGCAAAACTCCAGTGCTCTATACACTGGAAAAGAT
GGTCCTGAAGAGATGCTGAAAAAGAATACTCCTCCAACAAAAACAGTAAAAAAGGAAAACAAGAAGGTTTCAAAGAAACAAGGAAAAAAAGGGACAAACAGAAGGAAAAA
AAATAGAAAAGATCGTAACAGGGTACGTAGTTGGACAGGACAAAACCTCAAAATACCAGTTAAGTTCGGACTTAGGGAGTTTGAGTTGATTACTGGTCTGAACTGTGGAG
ATGTTAGTGCTGTTGATCATTCCAAACTGTCCGGTAGGTTTCTGAATAAATATTTTGGGAATGAAAGATCGGTGTCCTACGAAACCACCATTAAGTCTGTTAAAAATTCC
ATAAAAAATCATGGGGCTTTAGTAGCGGGGTTAGTTGGATTCCCGTATGCCTTATTGGTGTGGGCATACGAGTGTATCCATTTACTCATAAGACCAAATAGATACTATGC
GAGTCATGTCAGTACAAGACTTCCAAAAATGAAAAACTGGAAATTGGACGTGCATCCAGAATGGAGGGACCTCGCACTAAAGTTTTCATTCTGTCCTATGACTGTTGAGC
AACTTTTTGATATGGATAAGGGGATGAATGAAGAGTCTGAGAATGTAGGGGTTGAGAATGTTGGAGAGTGCTCGAAAAGAAATGAGGAAGAAGGACAAACAAAAAATGAT
CATCGACAAGGGAACAAACAAGCCGAAGATATTTTTCATGGGTTTGAGATGACTTTAGTTGAATTTCAAGATCTGGCTCTTCAGTTATCCCCTTATCCATATCAGAAAGT
TGCTCAACAGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCCGACGGACTTCTCCATTGTATCGTTTAGGGCTTCGTCTTCTTCACGGCGACAATCTGGTGGGTTTCACGGCGAAGTAAGTACGGTGAAGATAAAACAGAT
CCCAGATAGAGACGTAAGGAGCCAAAGGCTTCTTGGAAGCTCGACAAGGCGACCCAAAAATAAATCGAAAGAGAACGAAATTGTTACAATTTCAATTTCTGAGGGTGAAA
GTTCGGATAGCGTTGATTACCCGATGAACGTGGATGAAGGAACCCCTTCGAGGTCCAACATTTTCAACCGAATAGTTGGAAATGTTGGTAGAATGTTAAGTGCAATAGCC
TCAACCAAGAGACAACTTTTTGGGGATGAGGAAATTATTGATGCTAAAGGGAAAAAGGAAGAATATGCCAAGGGTGAAGATGAATTGTCGAACACCTCAAACAAGACAGA
TATTCTGGATGATCAAGACGAACGAATGGAAGATGTTTGTGAAGGAGGACAAGAGGAAGATGAACACATCGAAGTAAGAGGCGGGGAAACAAATGAAGAAGATATTGAGT
GGAAATCTATCAATGAAAATGTAATTGGGGTCGATGGAGGGCGATTTGATGAAGAAGTACATGATAAGGTGACAAGGCAAAACTCCAGTGCTCTATACACTGGAAAAGAT
GGTCCTGAAGAGATGCTGAAAAAGAATACTCCTCCAACAAAAACAGTAAAAAAGGAAAACAAGAAGGTTTCAAAGAAACAAGGAAAAAAAGGGACAAACAGAAGGAAAAA
AAATAGAAAAGATCGTAACAGGGTACGTAGTTGGACAGGACAAAACCTCAAAATACCAGTTAAGTTCGGACTTAGGGAGTTTGAGTTGATTACTGGTCTGAACTGTGGAG
ATGTTAGTGCTGTTGATCATTCCAAACTGTCCGGTAGGTTTCTGAATAAATATTTTGGGAATGAAAGATCGGTGTCCTACGAAACCACCATTAAGTCTGTTAAAAATTCC
ATAAAAAATCATGGGGCTTTAGTAGCGGGGTTAGTTGGATTCCCGTATGCCTTATTGGTGTGGGCATACGAGTGTATCCATTTACTCATAAGACCAAATAGATACTATGC
GAGTCATGTCAGTACAAGACTTCCAAAAATGAAAAACTGGAAATTGGACGTGCATCCAGAATGGAGGGACCTCGCACTAAAGTTTTCATTCTGTCCTATGACTGTTGAGC
AACTTTTTGATATGGATAAGGGGATGAATGAAGAGTCTGAGAATGTAGGGGTTGAGAATGTTGGAGAGTGCTCGAAAAGAAATGAGGAAGAAGGACAAACAAAAAATGAT
CATCGACAAGGGAACAAACAAGCCGAAGATATTTTTCATGGGTTTGAGATGACTTTAGTTGAATTTCAAGATCTGGCTCTTCAGTTATCCCCTTATCCATATCAGAAAGT
TGCTCAACAGTCATAG
Protein sequenceShow/hide protein sequence
MMKPTDFSIVSFRASSSSRRQSGGFHGEVSTVKIKQIPDRDVRSQRLLGSSTRRPKNKSKENEIVTISISEGESSDSVDYPMNVDEGTPSRSNIFNRIVGNVGRMLSAIA
STKRQLFGDEEIIDAKGKKEEYAKGEDELSNTSNKTDILDDQDERMEDVCEGGQEEDEHIEVRGGETNEEDIEWKSINENVIGVDGGRFDEEVHDKVTRQNSSALYTGKD
GPEEMLKKNTPPTKTVKKENKKVSKKQGKKGTNRRKKNRKDRNRVRSWTGQNLKIPVKFGLREFELITGLNCGDVSAVDHSKLSGRFLNKYFGNERSVSYETTIKSVKNS
IKNHGALVAGLVGFPYALLVWAYECIHLLIRPNRYYASHVSTRLPKMKNWKLDVHPEWRDLALKFSFCPMTVEQLFDMDKGMNEESENVGVENVGECSKRNEEEGQTKND
HRQGNKQAEDIFHGFEMTLVEFQDLALQLSPYPYQKVAQQS