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Spg023823 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023823
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:7714080..7714481
RNA-Seq ExpressionSpg023823
SyntenySpg023823
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]2.3e-1852.14Show/hide
Query:  LVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSGRDDELVSHE-TRVDVSCDE-------DNGEEGFREFID
        +VSS+HRNF+++L E IWV+KSSRAS+FLASN I+ ILF EK KR   ++      + C+   D EL S E   V+ SCDE       D+ E+  +EFID
Subjt:  LVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSGRDDELVSHE-TRVDVSCDE-------DNGEEGFREFID

Query:  MMNNSFWREELVYDRFL
        MM N+FWREEL++DRFL
Subjt:  MMNNSFWREELVYDRFL
KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]4.6e-1949.66Show/hide
Query:  MKKLPILFLLLLCLFLFFFYFSSPLVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSG--RDDELVSHE-TR
        MKKL ++FL ++ +  FF +F   +VS  HRN + Q  E + V+KSSRAS+FLASN II ILFG+K K+   ++  EE  + C SG   D EL S+E   
Subjt:  MKKLPILFLLLLCLFLFFFYFSSPLVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSG--RDDELVSHE-TR

Query:  VDVSCDEDNGEEGF---------REFIDMMNNSFWREELVYDRFL
        V+ SCDED  EEG          +EFIDMM N+FWREEL++DRFL
Subjt:  VDVSCDEDNGEEGF---------REFIDMMNNSFWREELVYDRFL
KAG6593708.1 hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0956.98Show/hide
Query:  IFILFGEKFKRSP-RQKGTEELVESCN--SGRDDELVSHETRVDVSCDEDNGEEGF--------REFIDMMNNSFWREELVYDRFL
        +FILFGEKFK+SP  +KG  E VES      RDDEL++H   V  SCDED G+E F        +EFI+MM  SFWREELV DRFL
Subjt:  IFILFGEKFKRSP-RQKGTEELVESCN--SGRDDELVSHETRVDVSCDEDNGEEGF--------REFIDMMNNSFWREELVYDRFL
TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein3.6e-1752.07Show/hide
Query:  LVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSG--RDDELVSHE-TRVDVSCDEDNGEEGF---------R
        +VS  HRN + Q  E + V+KSSRAS+FLASN II ILFG+K K+   ++  EE  + C SG   D EL S+E   V+ SCDED  EEG          +
Subjt:  LVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSG--RDDELVSHE-TRVDVSCDEDNGEEGF---------R

Query:  EFIDMMNNSFWREELVYDRFL
        EFIDMM N+FWREEL++DRFL
Subjt:  EFIDMMNNSFWREELVYDRFL
A0A5A7T9A6 Uncharacterized protein1.1e-1852.14Show/hide
Query:  LVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSGRDDELVSHE-TRVDVSCDE-------DNGEEGFREFID
        +VSS+HRNF+++L E IWV+KSSRAS+FLASN I+ ILF EK KR   ++      + C+   D EL S E   V+ SCDE       D+ E+  +EFID
Subjt:  LVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSGRDDELVSHE-TRVDVSCDE-------DNGEEGFREFID

Query:  MMNNSFWREELVYDRFL
        MM N+FWREEL++DRFL
Subjt:  MMNNSFWREELVYDRFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAACTTCCCATATTGTTTCTTTTGCTTCTTTGCCTCTTCCTCTTCTTCTTCTATTTCTCATCCCCCTTGGTGAGTTCCGAGCACCGAAACTTCCTCCTTCAATT
GTACGAAACCATTTGGGTGCTGAAATCGAGTCGTGCATCGGTGTTTCTTGCATCTAATGCCATCATTTTCATCCTCTTTGGTGAGAAGTTTAAGCGGTCACCGAGACAAA
AAGGAACAGAAGAACTGGTAGAAAGCTGTAATAGTGGACGCGACGATGAATTGGTTAGTCATGAAACTCGTGTTGATGTTAGTTGTGATGAAGATAATGGTGAAGAAGGG
TTTCGAGAGTTTATTGACATGATGAATAACTCTTTTTGGAGGGAAGAATTGGTTTATGATAGGTTTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAACTTCCCATATTGTTTCTTTTGCTTCTTTGCCTCTTCCTCTTCTTCTTCTATTTCTCATCCCCCTTGGTGAGTTCCGAGCACCGAAACTTCCTCCTTCAATT
GTACGAAACCATTTGGGTGCTGAAATCGAGTCGTGCATCGGTGTTTCTTGCATCTAATGCCATCATTTTCATCCTCTTTGGTGAGAAGTTTAAGCGGTCACCGAGACAAA
AAGGAACAGAAGAACTGGTAGAAAGCTGTAATAGTGGACGCGACGATGAATTGGTTAGTCATGAAACTCGTGTTGATGTTAGTTGTGATGAAGATAATGGTGAAGAAGGG
TTTCGAGAGTTTATTGACATGATGAATAACTCTTTTTGGAGGGAAGAATTGGTTTATGATAGGTTTCTCTAG
Protein sequenceShow/hide protein sequence
MKKLPILFLLLLCLFLFFFYFSSPLVSSEHRNFLLQLYETIWVLKSSRASVFLASNAIIFILFGEKFKRSPRQKGTEELVESCNSGRDDELVSHETRVDVSCDEDNGEEG
FREFIDMMNNSFWREELVYDRFL