CuGenDBv2

Gene ID	Spg023828
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ORF43m
Genome location	scaffold13:1044528..1044857
RNA-Seq Expression	Spg023828
Synteny	Spg023828
Gene Ontology terms	GO:0006101 - citrate metabolic process (biological process) GO:0006351 - transcription, DNA-templated (biological process) GO:0009507 - chloroplast (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function) GO:0004108 - citrate (Si)-synthase activity (molecular function) GO:0032549 - ribonucleoside binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]

2.0e-28

76.83

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GSLRV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL +PGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

PEK97815.1 hypothetical protein CN614_31275 [Bacillus toyonensis]

9.9e-28

74.39

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GS RV S  IHGE+DQVGPC++LDALSPFN LSEMRQ EGKS+D+ H LHPVGT RSP+GRL +PGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

QHE65624.1 ORF43m [Nitraria roborowskii]

5.3e-29

78.05

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GSLRV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL YPGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

VVW85218.1 unnamed protein product, partial [Nymphaea colorata]

5.8e-28

76.83

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWTIVGV GS RV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL +PGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

VVW85592.1 unnamed protein product, partial [Nymphaea colorata]

5.8e-28

76.83

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWTIVGV GS RV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL +PGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

TrEMBL top hits

e value

%identity

Alignment

A0A5K1HD35 Uncharacterized protein (Fragment)

2.8e-28

76.83

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWTIVGV GS RV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL +PGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

A0A6B9QF48 ORF43m

2.5e-29

78.05

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GSLRV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL YPGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

A0A6B9QFK3 ORF43m

2.5e-29

78.05

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GSLRV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL YPGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

A0A6B9QGL2 ORF43m

2.5e-29

78.05

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GSLRV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL YPGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

U5CKY2 Uncharacterized protein

9.7e-29

76.83

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Query:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP
        MDRTWT+VGV GSLRV S  I GE+DQVGPC++LDALSPFN LSEMRQ EGKS+DR HRLHPVGT RSP+GRL +PGV D+P
Subjt:  MDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAATGCAATGAAGCAAGCCAAGATCAATGAGGAGTTGGTCAGATCTAGTATGGATCGTACATGGACGATAGTTGGAGTCAGTGGCTCTCTTAGGGTTCTCTCATATGC
GATCCATGGGGAAAAGGATCAAGTTGGCCCTTGCAAACGGCTTGATGCACTATCTCCCTTCAACCATTTGAGCGAAATGCGGCAAAATGAAGGAAAATCCTTGGACCGAA
CCCATCGTCTCCACCCCGTGGGAACTATGAGATCACCCGAAGGACGGCTTTGGTATCCAGGGGTCGTAGACCAACCATTAGAACCTTGTCCAATAAGTGGAACGTATTAG

mRNA sequence

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Protein sequence

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MNAMKQAKINEELVRSSMDRTWTIVGVSGSLRVLSYAIHGEKDQVGPCKRLDALSPFNHLSEMRQNEGKSLDRTHRLHPVGTMRSPEGRLWYPGVVDQPLEPCPISGTY

Spg023828 (gene) of Sponge gourd (cylindrica) v1 genome