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Spg023847 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023847
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosomal protein-like protein
Genome locationscaffold13:399255..401216
RNA-Seq ExpressionSpg023847
SyntenySpg023847
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581756.1 hypothetical protein SDJN03_21758, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5584.25Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSS-GIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILD
        M + NS P   NSLPQDN+TAT M SS G QRRKLPSPQELVSHYESQGL+SHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILD
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSS-GIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILD

Query:  LKLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSMKL
        LKLDSKPGYA+TFALGLASGSVLNGIG +MPHVFGAL +IWSS K+
Subjt:  LKLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSMKL

KAG7026194.1 hypothetical protein SDJN02_12693, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-5583.56Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSS-GIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILD
        M + NS P   NSLPQDN+TAT M SS G QRRKLPSPQELVSHYESQGL+SHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILD
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSS-GIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILD

Query:  LKLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSMKL
        LKLDSKPGYA+TFALGLASGSVLNGIG +MPHVFGA+ +IWSS K+
Subjt:  LKLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSMKL

XP_022148109.1 uncharacterized protein LOC111016865 [Momordica charantia]2.6e-5583.92Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        MGE  SPP P NSLPQ NSTAT M SSG QRRKLP+PQELVSHYESQGL+SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KIDAT +R+AILDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYAETFA+GLASGSVL G+G++MPHVFGAL +IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

XP_022980748.1 uncharacterized protein LOC111480022 [Cucurbita maxima]8.2e-5785.31Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M + NS P   NSLPQDN+TAT M SSG QRRKLPSPQELVSHYESQGL+SHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYA+TFALGLASGSVLNGIG +MPHVFGAL +IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

XP_038893730.1 uncharacterized protein LOC120082569 [Benincasa hispida]1.1e-5887.41Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        MGE +S  PP NSLPQDNSTA  M SSG +RRK PSPQEL+SHYESQGL+SHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYAE+FALGLASGSVL+GIGT+MPHVFGALT+IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

TrEMBL top hitse value%identityAlignment
A0A1S4DV46 uncharacterized protein LOC1034875378.0e-5077.62Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M +  SP PP NSLPQ     +    S   RRK PSPQEL+SHYESQG +SHDASIKVI+DLQNALF+IISSGRGKKDKLL+ETSRKIDATN+RLA+LDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYAETFALGLASGSVLNG+GT+MPHVFGALT+IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

A0A5A7VAF7 Putative ribosomal-like protein8.0e-5077.62Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M +  SP PP NSLPQ     +    S   RRK PSPQEL+SHYESQG +SHDASIKVI+DLQNALF+IISSGRGKKDKLL+ETSRKIDATN+RLA+LDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYAETFALGLASGSVLNG+GT+MPHVFGALT+IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

A0A6J1D308 uncharacterized protein LOC1110168651.3e-5583.92Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        MGE  SPP P NSLPQ NSTAT M SSG QRRKLP+PQELVSHYESQGL+SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KIDAT +R+AILDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYAETFA+GLASGSVL G+G++MPHVFGAL +IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

A0A6J1GTX5 uncharacterized protein LOC1114575041.7e-5584.03Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSS-GIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILD
        M + NS P   NSLPQDN+TAT M SS G QRRKLPSPQELVSHYESQGL+SHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILD
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSS-GIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILD

Query:  LKLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        LKLDSKPGYA+TFALGLASGSVLNGIG +MPHVFGA+ +IWSS+
Subjt:  LKLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

A0A6J1J075 uncharacterized protein LOC1114800224.0e-5785.31Show/hide
Query:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M + NS P   NSLPQDN+TAT M SSG QRRKLPSPQELVSHYESQGL+SHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDL
Subjt:  MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM
        KLDSKPGYA+TFALGLASGSVLNGIG +MPHVFGAL +IWSS+
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTMMPHVFGALTHIWSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16790.1 ribosomal protein-related7.4e-3253.73Show/hide
Query:  PQDNSTATSMKSSGIQR-RKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGR--GKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAET
        P   + A   KS   Q+ +K P+P EL+SHY+ +GL   +ASIKVIEDLQNAL R++SS R    KDKL+ + +RKIDA N RLA++D KL++KPGY ET
Subjt:  PQDNSTATSMKSSGIQR-RKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGR--GKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAET

Query:  FALGLASGSVLNGIGTMMPHVFGALTHIWSSMKL
        FALGLASG+ LNGI  + PHV   +  IWS++++
Subjt:  FALGLASGSVLNGIGTMMPHVFGALTHIWSSMKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAATTAAATTCGCCGCCGCCACCCTCAAATTCTCTCCCCCAGGACAATAGTACTGCAACCTCCATGAAGTCTTCAGGAATCCAAAGAAGAAAGCTTCCTTCCCC
ACAGGAACTCGTATCCCACTACGAATCCCAAGGCCTTAGTTCTCACGATGCTTCAATCAAGGTAATAGAAGATCTTCAGAATGCTCTCTTTAGGATCATCTCCTCCGGCA
GAGGTAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATGCGACTAATAACCGTCTTGCCATTCTCGACCTAAAGTTGGACTCCAAGCCGGGCTATGCCGAG
ACTTTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGACTATGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTATGAAGTTAGTGGC
AGAAAGGAGACTCATAGTTGGTATTTGGAGGATTTGCAAGATTAAGAACCTTCAAATTCAAGATTCTTACCTGGGTACTGTTAGTGAAGAAGTTGAAATGTGCCCCATTC
CTTTCCTTGCAAAGTTACTTGCTACTACTGATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAATTAAATTCGCCGCCGCCACCCTCAAATTCTCTCCCCCAGGACAATAGTACTGCAACCTCCATGAAGTCTTCAGGAATCCAAAGAAGAAAGCTTCCTTCCCC
ACAGGAACTCGTATCCCACTACGAATCCCAAGGCCTTAGTTCTCACGATGCTTCAATCAAGGTAATAGAAGATCTTCAGAATGCTCTCTTTAGGATCATCTCCTCCGGCA
GAGGTAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATGCGACTAATAACCGTCTTGCCATTCTCGACCTAAAGTTGGACTCCAAGCCGGGCTATGCCGAG
ACTTTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGACTATGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTATGAAGTTAGTGGC
AGAAAGGAGACTCATAGTTGGTATTTGGAGGATTTGCAAGATTAAGAACCTTCAAATTCAAGATTCTTACCTGGGTACTGTTAGTGAAGAAGTTGAAATGTGCCCCATTC
CTTTCCTTGCAAAGTTACTTGCTACTACTGATGACTAA
Protein sequenceShow/hide protein sequence
MGELNSPPPPSNSLPQDNSTATSMKSSGIQRRKLPSPQELVSHYESQGLSSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAE
TFALGLASGSVLNGIGTMMPHVFGALTHIWSSMKLVAERRLIVGIWRICKIKNLQIQDSYLGTVSEEVEMCPIPFLAKLLATTDD