; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023890 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023890
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionlight-inducible protein CPRF2-like
Genome locationscaffold13:10238350..10240690
RNA-Seq ExpressionSpg023890
SyntenySpg023890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK18416.1 light-inducible protein CPRF2-like [Cucumis melo var. makuwa]8.2e-0982.98Show/hide
Query:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH  GEVIEIKDS+ NQ  KLN NHDGVSNCNST+
Subjt:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
XP_008455950.1 PREDICTED: light-inducible protein CPRF2-like [Cucumis melo]8.2e-0982.98Show/hide
Query:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH  GEVIEIKDS+ NQ  KLN NHDGVSNCNST+
Subjt:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
XP_022946491.1 light-inducible protein CPRF2 [Cucurbita moschata]5.3e-0880Show/hide
Query:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH EVIEIKD A NQ  KLNAN DG SNCNS++
Subjt:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
XP_022999406.1 light-inducible protein CPRF2 [Cucurbita maxima]4.0e-0880Show/hide
Query:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH EVIEIKD A NQ  KLNAN DG SNCNS++
Subjt:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
XP_038890464.1 light-inducible protein CPRF2 [Benincasa hispida]5.6e-1087.23Show/hide
Query:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH  GEVIEIKDSA NQSHKLNAN DGVSNCNS++
Subjt:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
TrEMBL top hitse value%identityAlignment
A0A1S3C277 light-inducible protein CPRF2-like3.9e-0982.98Show/hide
Query:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH  GEVIEIKDS+ NQ  KLN NHDGVSNCNST+
Subjt:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
A0A5A7V8V2 Light-inducible protein CPRF2-like3.9e-0982.98Show/hide
Query:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH  GEVIEIKDS+ NQ  KLN NHDGVSNCNST+
Subjt:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
A0A5D3D4F0 Light-inducible protein CPRF2-like3.9e-0982.98Show/hide
Query:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH  GEVIEIKDS+ NQ  KLN NHDGVSNCNST+
Subjt:  EASETSPHSSAADH--GEVIEIKDSARNQSHKLNANHDGVSNCNSTN
A0A6J1G3U7 light-inducible protein CPRF22.6e-0880Show/hide
Query:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH EVIEIKD A NQ  KLNAN DG SNCNS++
Subjt:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
A0A6J1KCY4 light-inducible protein CPRF22.0e-0880Show/hide
Query:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
        EASETSPHSSAADH EVIEIKD A NQ  KLNAN DG SNCNS++
Subjt:  EASETSPHSSAADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGTCGGACGTCTCAATTCGTGGGTGAAGAAGATCCAAGTCGTCGGCGCCTCCTCCTCCCTCCTCCGCTTTGCGCTGGCGAGGATCGATGATGGGGATGGTGAAAT
TGAAGAACACCGAACGGCCATGGAGAAAATCGAACTGCCAGATCTGAGAGGCTCCTCTTCGAACCGGTGCCAAAACTCACCCATGCCGAAGCTTGCAAACTGTCGTTGCT
GCGCTGCCGTCAAGACACCTCTACTCGCCGGAGAAGACTACCGGGGATGGGGGCAACCCAGTTCCGATTCGAATGGGGAGGCCTCTGAAACTTCCCCTCATTCCTCTGCT
GCAGACCATGGCGAAGTCATCGAGATCAAGGACTCTGCTCGTAATCAATCGCATAAACTTAATGCTAATCATGATGGTGTTAGTAATTGTAATAGCACCAACCGAATATT
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGTCGGACGTCTCAATTCGTGGGTGAAGAAGATCCAAGTCGTCGGCGCCTCCTCCTCCCTCCTCCGCTTTGCGCTGGCGAGGATCGATGATGGGGATGGTGAAAT
TGAAGAACACCGAACGGCCATGGAGAAAATCGAACTGCCAGATCTGAGAGGCTCCTCTTCGAACCGGTGCCAAAACTCACCCATGCCGAAGCTTGCAAACTGTCGTTGCT
GCGCTGCCGTCAAGACACCTCTACTCGCCGGAGAAGACTACCGGGGATGGGGGCAACCCAGTTCCGATTCGAATGGGGAGGCCTCTGAAACTTCCCCTCATTCCTCTGCT
GCAGACCATGGCGAAGTCATCGAGATCAAGGACTCTGCTCGTAATCAATCGCATAAACTTAATGCTAATCATGATGGTGTTAGTAATTGTAATAGCACCAACCGAATATT
TTGA
Protein sequenceShow/hide protein sequence
MLVGRLNSWVKKIQVVGASSSLLRFALARIDDGDGEIEEHRTAMEKIELPDLRGSSSNRCQNSPMPKLANCRCCAAVKTPLLAGEDYRGWGQPSSDSNGEASETSPHSSA
ADHGEVIEIKDSARNQSHKLNANHDGVSNCNSTNRIF