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Spg023895 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023895
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionActin-related protein 2/3 complex subunit 2
Genome locationscaffold13:4685891..4687602
RNA-Seq ExpressionSpg023895
SyntenySpg023895
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8548866.1 hypothetical protein F0562_000550 [Nyssa sinensis]4.9e-1761.04Show/hide
Query:  GSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        G L  +KVG D +G+ ++ES +L LP+ +GG+ RK EKPRRKVQWND NG KL EV+ F+PS VSDS+DE+SD+CMC
Subjt:  GSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

XP_007145827.1 hypothetical protein PHAVU_007G271300g [Phaseolus vulgaris]1.9e-1663.16Show/hide
Query:  SLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        +LG EKV + VNGD  S+S +L LP  RGG+SR  +K RRKVQWND NG KL EV+ +EPS VSDSEDE+SD+C+C
Subjt:  SLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

XP_020226457.1 uncharacterized protein LOC109808052 isoform X2 [Cajanus cajan]8.4e-1764.47Show/hide
Query:  SLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        SLG EKV + VNG+ +S+S AL LP  RGG+SR  +K RRKVQWND NG KL EV+ +EPS VSDSEDE+SD+C+C
Subjt:  SLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

XP_022138680.1 uncharacterized protein LOC111009782 [Momordica charantia]6.9e-2777.38Show/hide
Query:  MAVNRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        MAVNRHFGS+G EKV + VNGD N ES+AL LP  RGG+S+KL+KPRRKVQWNDNNGRKLTEV+VFE S  SDSED+ESDACMC
Subjt:  MAVNRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

XP_039058357.1 uncharacterized protein LOC120201905 [Hibiscus syriacus]3.2e-1658.14Show/hide
Query:  NRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCMCALM
        N   G+    KV    NGD  SES  L LP  +GG+SRK EKP RKVQWND NG KL E++VFEPS VSDS+DEESD+  C+C +M
Subjt:  NRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCMCALM

TrEMBL top hitse value%identityAlignment
A0A5B6YIB1 Uncharacterized protein1.2e-1661.54Show/hide
Query:  GSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCM
        GSL  +KV  D + + ++ES +L LP  RGG+SRK EKPRRKVQWND NG KL EV+ FEPS VSDS+DE+SD+C+C+
Subjt:  GSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCM

A0A5J5C1Q1 Uncharacterized protein2.4e-1761.04Show/hide
Query:  GSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        G L  +KVG D +G+ ++ES +L LP+ +GG+ RK EKPRRKVQWND NG KL EV+ F+PS VSDS+DE+SD+CMC
Subjt:  GSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

A0A6A3C9I2 Actin-related protein 2/3 complex subunit 21.5e-1658.14Show/hide
Query:  NRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCMCALM
        N   G+    KV    NGD  SES  L LP  +GG+SRK EKP RKVQWND NG KL E++VFEPS VSDS+DEESD+  C+C +M
Subjt:  NRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCMCALM

A0A6J1CA45 uncharacterized protein LOC1110097823.3e-2777.38Show/hide
Query:  MAVNRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        MAVNRHFGS+G EKV + VNGD N ES+AL LP  RGG+S+KL+KPRRKVQWNDNNGRKLTEV+VFE S  SDSED+ESDACMC
Subjt:  MAVNRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

V7BMK7 Uncharacterized protein9.1e-1763.16Show/hide
Query:  SLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        +LG EKV + VNGD  S+S +L LP  RGG+SR  +K RRKVQWND NG KL EV+ +EPS VSDSEDE+SD+C+C
Subjt:  SLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein7.9e-0551.11Show/hide
Query:  RRKVQWNDNNGRKLTEVVVFEPSSVSDSEDE--ESDACMCMCALM
        RRKVQW D  G ++ EV  FEPS V +SEDE        CMC +M
Subjt:  RRKVQWNDNNGRKLTEVVVFEPSSVSDSEDE--ESDACMCMCALM

AT2G33390.1 unknown protein1.2e-1345.68Show/hide
Query:  NRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC
        N+   SL   ++ + +  +  SES  L LP  +GG+SR  +K +R VQWND  G  L EV+V+EPS VSD+ED++SD+C+C
Subjt:  NRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGAATAGACATTTTGGTTCTTTAGGGTTCGAGAAGGTTGGGAACGACGTCAATGGAGACTGCAATAGTGAATCGATTGCTTTGATATTGCCATCTCTTCGAGG
TGGGCTTTCAAGGAAACTGGAAAAACCGAGGCGAAAAGTGCAGTGGAATGATAACAATGGACGAAAGTTAACGGAGGTAGTGGTGTTTGAACCAAGTTCTGTAAGCGATT
CGGAAGATGAGGAATCAGATGCGTGTATGTGTATGTGTGCTTTAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGAATAGACATTTTGGTTCTTTAGGGTTCGAGAAGGTTGGGAACGACGTCAATGGAGACTGCAATAGTGAATCGATTGCTTTGATATTGCCATCTCTTCGAGG
TGGGCTTTCAAGGAAACTGGAAAAACCGAGGCGAAAAGTGCAGTGGAATGATAACAATGGACGAAAGTTAACGGAGGTAGTGGTGTTTGAACCAAGTTCTGTAAGCGATT
CGGAAGATGAGGAATCAGATGCGTGTATGTGTATGTGTGCTTTAATGTAA
Protein sequenceShow/hide protein sequence
MAVNRHFGSLGFEKVGNDVNGDCNSESIALILPSLRGGLSRKLEKPRRKVQWNDNNGRKLTEVVVFEPSSVSDSEDEESDACMCMCALM