; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023908 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023908
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein ZIP4 homolog
Genome locationscaffold13:7495507..7497579
RNA-Seq ExpressionSpg023908
SyntenySpg023908
Gene Ontology termsGO:0051321 - meiotic cell cycle (biological process)
GO:0005694 - chromosome (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR013940 - Meiosis specific protein Spo22/ZIP4/TEX11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576021.1 TPR repeat-containing protein ZIP4, partial [Cucurbita argyrosperma subsp. sororia]4.7e-10775.65Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWV+AVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

KAG7014542.1 TPR repeat-containing protein ZIP4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-10775.65Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWV+AVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

XP_022954029.1 TPR repeat-containing protein ZIP4 isoform X1 [Cucurbita moschata]2.1e-10776.01Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

XP_022954031.1 TPR repeat-containing protein ZIP4 isoform X2 [Cucurbita moschata]2.1e-10776.01Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

XP_023548601.1 TPR repeat-containing protein ZIP4 isoform X2 [Cucurbita pepo subsp. pepo]1.8e-10675.28Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LY+A DV+ VP+PA KSASFYYKTGLIW++LKNFELAS CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

TrEMBL top hitse value%identityAlignment
A0A1S3B3Z1 Protein ZIP4 homolog6.2e-10573.8Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRH+ SD+LYLA DV  VP+PAVKSASFYYKTGLIW+ LKNFELAS+CFERAS+IVSK+DLT+VVD+ AKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYL+ GK ELSK E  AFREALKLMNEALDLFEKGL VAR RE+M+EFK LRSKTLRFISAVHLQ++EF++VIKCVR+L+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLA+ AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

A0A6J1GPR3 Protein ZIP4 homolog1.0e-10776.01Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

A0A6J1GRN6 Protein ZIP4 homolog1.0e-10776.01Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAGAKK LLDLNIA                  
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA------------------

Query:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  --------SSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

A0A6J1JQY9 Protein ZIP4 homolog1.5e-10675.28Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI-------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAG KK LLDLNI                   
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI-------------------

Query:  -------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  -------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

A0A6J1JT57 Protein ZIP4 homolog1.5e-10675.28Show/hide
Query:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI-------------------
        HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVSK+DLT V DAG KK LLDLNI                   
Subjt:  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI-------------------

Query:  -------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                 SPEHYKALGDEYLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISAVHLQ++EF++VIKCVRLL+D
Subjt:  -------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        GDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGIPESAWVSAVE YFEAVGGAG ETA GVFM L
Subjt:  GDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

SwissProt top hitse value%identityAlignment
A2WXU2 TPR repeat-containing protein ZIP46.9e-2931.93Show/hide
Query:  LVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI----------------
        L   A +R    ++L LA   N VP+ A K ASF++++GL W  L   +LAS CFE+A+ +VS     A  D G    LL+LN+                
Subjt:  LVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI----------------

Query:  ----------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVAR----------AREEMVEFKVLRSKTLRFISAVHLQIDE
                  A+SPE  K+L   YL++G+  L+ + ++   EA  L  EALDL EK    +           A  +    + L+ + LRF++   LQ  +
Subjt:  ----------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVAR----------AREEMVEFKVLRSKTLRFISAVHLQIDE

Query:  FKNVIKCVRLLKDG-DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        ++ V++C+R+ +      + HPS+ V+AM AW+G G   E +++L  ++ N    E+  VSA EAY  A   AG E A  V + L
Subjt:  FKNVIKCVRLLKDG-DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

B0M1H3 TPR repeat-containing protein ZIP41.1e-7755.64Show/hide
Query:  ANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA-------------------
        ANLRHV +D+L+LA DV  VP+P +KS+ FYYKTGL+++SLK F+LAS+CFERA+ IVSK+D+  + DAG KK  LDLN+A                   
Subjt:  ANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA-------------------

Query:  -------SSPEHYKALGDEYLAVGKTELSKRENH-AFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                SP+HYK+L +++LA GK+ LS+ ++  +  +AL+LMNEALDL EKGL  A+ RE+  EF  +R KTLRFISAVHLQ  EF+NVIKCV++L++
Subjt:  -------SSPEHYKALGDEYLAVGKTELSKRENH-AFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  G----DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        G    D  D H SL VLAM AWLGLGRH E E++LRGM+ N  IPE+ WVSAVEAYFE VG AG ETA GVF+ L
Subjt:  G----DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

Q5N829 TPR repeat-containing protein ZIP46.9e-2931.93Show/hide
Query:  LVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI----------------
        L   A +R    ++L LA   N VP+ A K ASF++++GL W  L   +LAS CFE+A+ +VS     A  D G    LL+LN+                
Subjt:  LVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNI----------------

Query:  ----------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVAR----------AREEMVEFKVLRSKTLRFISAVHLQIDE
                  A+SPE  K+L   YL++G+  L+ + ++   EA  L  EALDL EK    +           A  +    + L+ + LRF++   LQ  +
Subjt:  ----------ASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVAR----------AREEMVEFKVLRSKTLRFISAVHLQIDE

Query:  FKNVIKCVRLLKDG-DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        ++ V++C+R+ +      + HPS+ V+AM AW+G G   E +++L  ++ N    E+  VSA EAY  A   AG E A  V + L
Subjt:  FKNVIKCVRLLKDG-DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL

Arabidopsis top hitse value%identityAlignment
AT5G48390.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.5e-7955.64Show/hide
Query:  ANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA-------------------
        ANLRHV +D+L+LA DV  VP+P +KS+ FYYKTGL+++SLK F+LAS+CFERA+ IVSK+D+  + DAG KK  LDLN+A                   
Subjt:  ANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIA-------------------

Query:  -------SSPEHYKALGDEYLAVGKTELSKRENH-AFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD
                SP+HYK+L +++LA GK+ LS+ ++  +  +AL+LMNEALDL EKGL  A+ RE+  EF  +R KTLRFISAVHLQ  EF+NVIKCV++L++
Subjt:  -------SSPEHYKALGDEYLAVGKTELSKRENH-AFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKD

Query:  G----DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL
        G    D  D H SL VLAM AWLGLGRH E E++LRGM+ N  IPE+ WVSAVEAYFE VG AG ETA GVF+ L
Subjt:  G----DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCGTCTTTGCAGGAGGGGAAGAGATGGTTTTACATGTCGACCTTTGATGAAGAGTCTCGCCATTGTGGTGTGGGGGCAGTTATCAGAACAAGGGAAGGACAATT
GGTGGCTCATGCCAATCTCCGCCATGTCGACTCGGACGTCCTCTACCTCGCCGTCGATGTCAACAGAGTCCCTACCCCTGCCGTCAAGTCCGCTTCGTTCTACTACAAGA
CCGGATTGATATGGTATAGTCTCAAGAACTTCGAACTCGCCTCCAATTGCTTTGAGAGGGCTTCGAATATCGTTTCGAAGATGGATCTCACCGCAGTCGTCGATGCTGGC
GCCAAAAAGCCTCTATTGGATCTGAACATCGCTAGCTCACCTGAGCACTACAAAGCGCTTGGAGACGAGTACTTGGCGGTTGGGAAGACCGAACTATCGAAGAGGGAAAA
TCATGCATTCCGCGAGGCTCTAAAGCTGATGAACGAAGCTCTGGATCTATTCGAGAAAGGTCTGCATGTGGCAAGAGCTAGAGAGGAGATGGTTGAGTTTAAAGTCCTAA
GATCCAAGACGCTGAGGTTCATTTCAGCTGTTCATTTGCAGATTGATGAGTTCAAGAATGTGATTAAGTGTGTGAGGCTTTTAAAAGATGGAGATTGCGGCGATAATCAT
CCAAGCCTGTCGGTTCTGGCTATGAATGCTTGGTTGGGGTTAGGAAGGCATAGGGAGGTCGAGCAAGATCTGCGAGGAATGATTGAGAACAAGGGAATTCCGGAGAGTGC
TTGGGTTTCGGCTGTTGAGGCTTACTTCGAGGCGGTGGGAGGGGCTGGAACAGAGACCGCCACGGGAGTGTTCATGGAGCTGAAGCAGGCTTACTTCATTTTTCCGCCGG
AAAACAGAGGAGGGAGCTCTCTCTCTCCCTCCCCGTTTCAGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCGTCTTTGCAGGAGGGGAAGAGATGGTTTTACATGTCGACCTTTGATGAAGAGTCTCGCCATTGTGGTGTGGGGGCAGTTATCAGAACAAGGGAAGGACAATT
GGTGGCTCATGCCAATCTCCGCCATGTCGACTCGGACGTCCTCTACCTCGCCGTCGATGTCAACAGAGTCCCTACCCCTGCCGTCAAGTCCGCTTCGTTCTACTACAAGA
CCGGATTGATATGGTATAGTCTCAAGAACTTCGAACTCGCCTCCAATTGCTTTGAGAGGGCTTCGAATATCGTTTCGAAGATGGATCTCACCGCAGTCGTCGATGCTGGC
GCCAAAAAGCCTCTATTGGATCTGAACATCGCTAGCTCACCTGAGCACTACAAAGCGCTTGGAGACGAGTACTTGGCGGTTGGGAAGACCGAACTATCGAAGAGGGAAAA
TCATGCATTCCGCGAGGCTCTAAAGCTGATGAACGAAGCTCTGGATCTATTCGAGAAAGGTCTGCATGTGGCAAGAGCTAGAGAGGAGATGGTTGAGTTTAAAGTCCTAA
GATCCAAGACGCTGAGGTTCATTTCAGCTGTTCATTTGCAGATTGATGAGTTCAAGAATGTGATTAAGTGTGTGAGGCTTTTAAAAGATGGAGATTGCGGCGATAATCAT
CCAAGCCTGTCGGTTCTGGCTATGAATGCTTGGTTGGGGTTAGGAAGGCATAGGGAGGTCGAGCAAGATCTGCGAGGAATGATTGAGAACAAGGGAATTCCGGAGAGTGC
TTGGGTTTCGGCTGTTGAGGCTTACTTCGAGGCGGTGGGAGGGGCTGGAACAGAGACCGCCACGGGAGTGTTCATGGAGCTGAAGCAGGCTTACTTCATTTTTCCGCCGG
AAAACAGAGGAGGGAGCTCTCTCTCTCCCTCCCCGTTTCAGATCTGA
Protein sequenceShow/hide protein sequence
MWSSLQEGKRWFYMSTFDEESRHCGVGAVIRTREGQLVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAG
AKKPLLDLNIASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKDGDCGDNH
PSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMELKQAYFIFPPENRGGSSLSPSPFQI