CuGenDBv2

Gene ID	Spg023949
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin-like protein ATG12
Genome location	scaffold13:1045608..1051557
RNA-Seq Expression	Spg023949
Synteny	Spg023949
Gene Ontology terms	GO:0000045 - autophagosome assembly (biological process) GO:0005737 - cytoplasm (cellular component)
InterPro domains	IPR007242 - Ubiquitin-like protein Atg12 IPR029071 - Ubiquitin-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004151012.1 ubiquitin-like protein ATG12 [Cucumis sativus]

3.2e-16

58.95

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        M S ESSSSARKVVVLLRATGDAPILKQTKFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

XP_008464001.1 PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]

7.2e-16

57.89

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        M S ESS+SARKVVVLLRATGDAPILKQTKFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

XP_022153405.1 ubiquitin-like protein ATG12 [Momordica charantia]

1.2e-15

59.18

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFG-------GRMILNFGIDGKLVVNYACSMAWG
        MAS ESSSS RKVVVLLRATGDAPILKQTKFKMPGTD    FI  ++  R+ +            F          +  NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFG-------GRMILNFGIDGKLVVNYACSMAWG

XP_022955552.1 ubiquitin-like protein ATG12 [Cucurbita moschata]

2.1e-15

56.84

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MASMESSSSA+KVVVLLR+ GDAPILKQ KFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

XP_038878493.1 ubiquitin-like protein ATG12 [Benincasa hispida]

1.1e-16

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MAS ESSSSARKVVVLLRATGDAPILKQTKFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIA6 Ubiquitin-like protein ATG12

1.6e-16

58.95

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        M S ESSSSARKVVVLLRATGDAPILKQTKFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

A0A1S3CKI1 Ubiquitin-like protein ATG12

3.5e-16

57.89

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        M S ESS+SARKVVVLLRATGDAPILKQTKFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

A0A6J1DGR5 Ubiquitin-like protein ATG12

5.9e-16

59.18

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFG-------GRMILNFGIDGKLVVNYACSMAWG
        MAS ESSSS RKVVVLLRATGDAPILKQTKFKMPGTD    FI  ++  R+ +            F          +  NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFG-------GRMILNFGIDGKLVVNYACSMAWG

A0A6J1GTZ1 Ubiquitin-like protein ATG12

1.0e-15

56.84

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MASMESSSSA+KVVVLLR+ GDAPILKQ KFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

A0A6J1J054 Ubiquitin-like protein ATG12

5.0e-15

54.74

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MASMESS+S++KVVVLLR+ GDAPILKQ KFKMPGTD     I ++    +        ++A        ++    NFGIDGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

SwissProt top hits

e value

%identity

Alignment

A2YAG8 Ubiquitin-like protein ATG12

1.5e-08

42.7

Show/hide

Query:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        ++  +KVVV  R+TG+AP LKQ+KFK+ G +     I FL  +          ++A       +I+    NFGIDG+LVVNYA SMAWG
Subjt:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

Q1SF86 Ubiquitin-like protein ATG12

4.4e-16

52.63

Show/hide

Query:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MA+ ES +S RKVVV LRATGDAPILKQ+KFK+ GTD     I FL  +    +     ++A       +++    NFG DGKLVVNYACSMAWG
Subjt:  MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

Q69NP0 Ubiquitin-like protein ATG12

1.5e-08

42.7

Show/hide

Query:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        ++  +KVVV  R+TG+AP LKQ+KFK+ G +     I FL  +          ++A       +I+    NFGIDG+LVVNYA SMAWG
Subjt:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

Q8S924 Ubiquitin-like protein ATG12A

8.3e-15

53.12

Show/hide

Query:  MASMESS-SSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MA+  SS SS RKVVV LRATG APILKQ+KFK+PGTD     I FL  +    +     ++A        ++    NFG DGKLVVNYACSMAWG
Subjt:  MASMESS-SSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

Q9LVK3 Ubiquitin-like protein ATG12B

2.7e-13

48.35

Show/hide

Query:  ESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        ES +S +K+VV LRATG APILKQ+KFK+ G+D   + I FL  +    +     ++A        ++    NFG DGKLVVNYACSMAWG
Subjt:  ESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

Arabidopsis top hits

e value

%identity

Alignment

AT1G54210.1 Ubiquitin-like superfamily protein

5.9e-16

53.12

Show/hide

Query:  MASMESS-SSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        MA+  SS SS RKVVV LRATG APILKQ+KFK+PGTD     I FL  +    +     ++A        ++    NFG DGKLVVNYACSMAWG
Subjt:  MASMESS-SSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

AT1G54210.2 Ubiquitin-like superfamily protein

1.7e-10

47.25

Show/hide

Query:  MASMESS-SSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFIFLEGERKGLAEVACASTALLTFGGRMILNFGIDGKLVVNYACSMAWG
        MA+  SS SS RKVVV LRATG APILKQ+KFK                                       NFG DGKLVVNYACSMAWG
Subjt:  MASMESS-SSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFIFLEGERKGLAEVACASTALLTFGGRMILNFGIDGKLVVNYACSMAWG

AT3G13970.1 Ubiquitin-like superfamily protein

1.9e-14

48.35

Show/hide

Query:  ESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG
        ES +S +K+VV LRATG APILKQ+KFK+ G+D   + I FL  +    +     ++A        ++    NFG DGKLVVNYACSMAWG
Subjt:  ESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFI-FLEGERKGLAEVACASTALLTFGGRMIL----NFGIDGKLVVNYACSMAWG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCTATGGAGTCGTCTAGTTCTGCTCGAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCAGGAACAGA
CAACACAGATCATTTTATATTCTTAGAAGGTGAAAGAAAAGGTCTTGCTGAGGTGGCATGTGCCAGTACGGCATTGCTTACTTTTGGTGGTAGAATGATTCTGAACTTTG
GAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFIFLEGERKGLAEVACASTALLTFGGRMILNFGIDGKLVVNYACSMAWG

Spg023949 (gene) of Sponge gourd (cylindrica) v1 genome