| GenBank top hits | e value | %identity | Alignment |
|---|
| KAF8388708.1 hypothetical protein HHK36_025388 [Tetracentron sinense] | 2.6e-30 | 57.94 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW PE IFL+TSL +YLD+K+LL L DGR +GI+RSFD + N VL+ A ER+IVG+LYCD GL + R EN +L+GE+D ELPP MT VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
+AQKAE D++ LK S +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| XP_022955856.1 sm-like protein LSM1B [Cucurbita moschata] | 1.7e-34 | 59.5 | Show/hide |
Query: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
E+IF T +G+YLDRK+L+ LLDGR IG M +FD HGN V++ AFERI+ N YCD GL++ R +NA+ +GEMD FPELPP +T+VSLP+IL A+K
Subjt: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
Query: AEMDSSRLKRSFKKWMEDFLD
AE++SS LKR+ KKWME+ LD
Subjt: AEMDSSRLKRSFKKWMEDFLD
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| XP_022980750.1 sm-like protein LSM1B [Cucurbita maxima] | 5.6e-33 | 57.85 | Show/hide |
Query: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
E+IF T +G+YLDRK+L+ LLDGR IG M +FD +GN+V++ AFERI N YCD GL++ R +NAI +GEMD FPELPP +T+VSLP+IL A+K
Subjt: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
Query: AEMDSSRLKRSFKKWMEDFLD
AE+ SS KR+ KKWME+ D
Subjt: AEMDSSRLKRSFKKWMEDFLD
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| XP_023527037.1 sm-like protein LSM1B isoform X2 [Cucurbita pepo subsp. pepo] | 5.4e-36 | 60.66 | Show/hide |
Query: PEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQ
PE+IF T +G+YLDRK+L+ LLDGR IG M +FD HGN V++ AFERI+ N YCD GL++ R +NAI +GEMD FPELPP +T+VSLP+IL A+
Subjt: PEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQ
Query: KAEMDSSRLKRSFKKWMEDFLD
KAE++SS LKR+ KKWME+ LD
Subjt: KAEMDSSRLKRSFKKWMEDFLD
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| XP_039018543.1 sm-like protein LSM1B [Hibiscus syriacus] | 2.6e-30 | 56.35 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW P+ IFL+TSL YLD+K+++ L DGR +G++RSFD N+VL+ A ER+IVGNLYCD GL + R EN +L+GEMDS ELPP MT+VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQKAE +++ LK S +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A022Q0J9 U6 snRNA-associated Sm-like protein LSm1 | 2.1e-30 | 55.56 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW PE ++ +TSL +YLD+K+L+ L DGR +GI+RSFD N VL+ A ER+IVG LYCD GL + R EN +L+GE+D ELPP MT VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQKAE ++S LK + KKWM DFLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| A0A5C7HX26 U6 snRNA-associated Sm-like protein LSm1 | 2.1e-30 | 57.14 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW P+ +FL+TSL YLD+KIL+ L DGR +G++RSFD N+VL+ A ERIIVG+LYCD GL + R EN +L+GE+DS ELPP MT VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQKAE D++ LK S +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| A0A6A2Z8Z4 U6 snRNA-associated Sm-like protein LSm1 | 1.3e-30 | 56.35 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW P+ IFL+TSL YLD+K+++ L DGR +G++RSFD N+VL+ A ER+IVGNLYCD GL + R EN +L+GEMDS ELPP MT+VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQKAE +++ LK S +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| A0A6J1GV01 sm-like protein LSM1B | 8.4e-35 | 59.5 | Show/hide |
Query: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
E+IF T +G+YLDRK+L+ LLDGR IG M +FD HGN V++ AFERI+ N YCD GL++ R +NA+ +GEMD FPELPP +T+VSLP+IL A+K
Subjt: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
Query: AEMDSSRLKRSFKKWMEDFLD
AE++SS LKR+ KKWME+ LD
Subjt: AEMDSSRLKRSFKKWMEDFLD
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| A0A6J1IXE4 sm-like protein LSM1B | 2.7e-33 | 57.85 | Show/hide |
Query: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
E+IF T +G+YLDRK+L+ LLDGR IG M +FD +GN+V++ AFERI N YCD GL++ R +NAI +GEMD FPELPP +T+VSLP+IL A+K
Subjt: EHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQK
Query: AEMDSSRLKRSFKKWMEDFLD
AE+ SS KR+ KKWME+ D
Subjt: AEMDSSRLKRSFKKWMEDFLD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P87173 U6 snRNA-associated Sm-like protein LSm1 | 5.1e-13 | 47.14 | Show/hide |
Query: SLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMD
SL Y+DRK+++ L DG+ IGI+RSFD N++LQ ERI V ++Y D +G+ + R EN +L+GE+D
Subjt: SLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMD
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| Q54W83 Probable U6 snRNA-associated Sm-like protein LSm1 | 1.4e-15 | 40 | Show/hide |
Query: LTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQKAEM-
+++ LG +D+K+++ L DGR FIGIMR+FD NIVLQD ERI VG+ Y D GL R +N +++GE+D + +S EI A E
Subjt: LTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQKAEM-
Query: ---DSSRLKR
+ +LKR
Subjt: ---DSSRLKR
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| Q5E9Z8 U6 snRNA-associated Sm-like protein LSm1 | 1.1e-12 | 41 | Show/hide |
Query: TTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQKAEMDS
T SL +D+K L+ L DGR IG +RS D N+VL ERI VG Y D +G+ + R EN +L+GE+D E + VS+ EIL Q+ E +
Subjt: TTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEILTAQKAEMDS
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| Q8LFL8 Sm-like protein LSM1B | 3.0e-29 | 52.38 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW PE I+L+TSL +YLDRK+L+ L DGR +G +RSFD N VL+ A ER+IVG YCD GL + R EN +L+GE+D+ ELPP M VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQK E ++S L+ + +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| Q945P8 Sm-like protein LSM1A | 3.0e-29 | 51.59 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW P+ IF +TSL AYLD+K+L+ L DGR +G++RSFD N VL++A+ER+IVG+LYCD GL + R EN +L+GE+D ELP M V EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQKAE + LK + +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G19120.1 Small nuclear ribonucleoprotein family protein | 2.1e-30 | 51.59 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW P+ IF +TSL AYLD+K+L+ L DGR +G++RSFD N VL++A+ER+IVG+LYCD GL + R EN +L+GE+D ELP M V EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQKAE + LK + +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| AT1G65700.1 Small nuclear ribonucleoprotein family protein | 6.2e-06 | 31.51 | Show/hide |
Query: TTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNR-KGLVLTRAENAILVGEMD
TT L +D+ I + DGR+ +G+++ FD NI+L ++ ER+ GL + R +N ++GE+D
Subjt: TTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNR-KGLVLTRAENAILVGEMD
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| AT1G65700.2 Small nuclear ribonucleoprotein family protein | 6.2e-06 | 31.51 | Show/hide |
Query: TTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNR-KGLVLTRAENAILVGEMD
TT L +D+ I + DGR+ +G+++ FD NI+L ++ ER+ GL + R +N ++GE+D
Subjt: TTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNR-KGLVLTRAENAILVGEMD
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 2.1e-30 | 52.38 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW PE I+L+TSL +YLDRK+L+ L DGR +G +RSFD N VL+ A ER+IVG YCD GL + R EN +L+GE+D+ ELPP M VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQK E ++S L+ + +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 2.1e-30 | 52.38 | Show/hide |
Query: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
SW PE I+L+TSL +YLDRK+L+ L DGR +G +RSFD N VL+ A ER+IVG YCD GL + R EN +L+GE+D+ ELPP M VS EI
Subjt: SWLRPEHIFLTTSLGAYLDRKILLTLLDGRDFIGIMRSFDHHGNIVLQDAFERIIVGNLYCDNRKGLVLTRAENAILVGEMDSRFPELPPDMTSVSLPEI
Query: LTAQKAEMDSSRLKRSFKKWMEDFLD
AQK E ++S L+ + +K ME FLD
Subjt: LTAQKAEMDSSRLKRSFKKWMEDFLD
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