; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg023972 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg023972
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold13:1146591..1149155
RNA-Seq ExpressionSpg023972
SyntenySpg023972
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]2.2e-4655.37Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G  D  VDL+  TC+CREFDY++IPCSH IAAA  RN+N  +LC  AY T S IL
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST
        +Y EPI+PVG +  W  S EF  + + PPK V RVGRR T RIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.1e-4551.69Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        + RT  SS  + L+EYAEN+L E  +++R H+V PID +++++ +G    RV+++ +TCTC++F YYEIPCSHAIA A  RN++V TLCS  Y  +++I 
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT
        +YVEP+YP+G   +W    ++    I PP+ V RVGR +T RIPS GE   V+QVHKCGRCGN+GHN KTCR+PL TT
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]4.7e-1232.37Show/hide
Query:  GLWKENERDYEGGYLAGLDVDIDIRYEEFLRELYNLSDINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKVVHGSGS
        G W E    YEGG + GL+VD  I Y + +  ++ ++ INPD F+++++C+Y F  +  VP + I +D  L F+L G    S++PLY+S++PK    SGS
Subjt:  GLWKENERDYEGGYLAGLDVDIDIRYEEFLRELYNLSDINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKVVHGSGS

Query:  NLGSHSHIPPTISQPFSQPPPSFAQTGPYNLAENIP---------SSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDALNYEEEE
        N    SH  P   Q       +FA + P+ + +N+P         SSI + HP   +V   TP+++  VP +L DD   +FG              + ++
Subjt:  NLGSHSHIPPTISQPFSQPPPSFAQTGPYNLAENIP---------SSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDALNYEEEE

Query:  YDEEEDENWEYNEEDEELDESYEE-ESEADEFEEVDDYDDD
          ++ED  +    +D E D+ Y+E ESE D   +   YD D
Subjt:  YDEEEDENWEYNEEDEELDESYEE-ESEADEFEEVDDYDDD

XP_022155156.1 uncharacterized protein LOC111022299 [Momordica charantia]7.6e-4752.25Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        E RT+AS+ +S L++Y E ++  A +++R+H + PID Y+Y++ +G    RV+L+ ++CTC++FDYY+IPCSHA+ A   RNV++ TLCSP Y  E+++ 
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT
        +Y EPIYP+G   +W    +F E  I PPK VARVGRR+TVRIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]6.4e-4652.54Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        E RT+ASS  + L+ Y EN +   E  SR H++ PID ++ ++ +G    RV+L+ RTC C+EFDY++ PCSHAIAA    NVN  TLCSPAY  +++I 
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST
        +YVEP+YP+G   +W    +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]2.6e-4756.5Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G LD  VDL+   C+CREFDY++IPCSHAIAAA  RN+N  +LC  AY T S IL
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST
        +Y EPI+PVG +  W  S EF  + + PPK V RVGRR+TVRIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST

TrEMBL top hitse value%identityAlignment
A0A6J1DK35 uncharacterized protein LOC1110218331.1e-4655.37Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G  D  VDL+  TC+CREFDY++IPCSH IAAA  RN+N  +LC  AY T S IL
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST
        +Y EPI+PVG +  W  S EF  + + PPK V RVGRR T RIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DLB0 uncharacterized protein LOC1110219695.3e-4651.69Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        + RT  SS  + L+EYAEN+L E  +++R H+V PID +++++ +G    RV+++ +TCTC++F YYEIPCSHAIA A  RN++V TLCS  Y  +++I 
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT
        +YVEP+YP+G   +W    ++    I PP+ V RVGR +T RIPS GE   V+QVHKCGRCGN+GHN KTCR+PL TT
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DLB0 uncharacterized protein LOC1110219692.3e-1232.37Show/hide
Query:  GLWKENERDYEGGYLAGLDVDIDIRYEEFLRELYNLSDINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKVVHGSGS
        G W E    YEGG + GL+VD  I Y + +  ++ ++ INPD F+++++C+Y F  +  VP + I +D  L F+L G    S++PLY+S++PK    SGS
Subjt:  GLWKENERDYEGGYLAGLDVDIDIRYEEFLRELYNLSDINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKVVHGSGS

Query:  NLGSHSHIPPTISQPFSQPPPSFAQTGPYNLAENIP---------SSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDALNYEEEE
        N    SH  P   Q       +FA + P+ + +N+P         SSI + HP   +V   TP+++  VP +L DD   +FG              + ++
Subjt:  NLGSHSHIPPTISQPFSQPPPSFAQTGPYNLAENIP---------SSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDALNYEEEE

Query:  YDEEEDENWEYNEEDEELDESYEE-ESEADEFEEVDDYDDD
          ++ED  +    +D E D+ Y+E ESE D   +   YD D
Subjt:  YDEEEDENWEYNEEDEELDESYEE-ESEADEFEEVDDYDDD

A0A6J1DQV1 uncharacterized protein LOC1110222993.7e-4752.25Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        E RT+AS+ +S L++Y E ++  A +++R+H + PID Y+Y++ +G    RV+L+ ++CTC++FDYY+IPCSHA+ A   RNV++ TLCSP Y  E+++ 
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT
        +Y EPIYP+G   +W    +F E  I PPK VARVGRR+TVRIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DRF6 uncharacterized protein LOC1110236643.1e-4652.54Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        E RT+ASS  + L+ Y EN +   E  SR H++ PID ++ ++ +G    RV+L+ RTC C+EFDY++ PCSHAIAA    NVN  TLCSPAY  +++I 
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST
        +YVEP+YP+G   +W    +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DYC4 uncharacterized protein LOC1110256781.3e-4756.5Show/hide
Query:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL
        + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G LD  VDL+   C+CREFDY++IPCSHAIAAA  RN+N  +LC  AY T S IL
Subjt:  EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVIL

Query:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST
        +Y EPI+PVG +  W  S EF  + + PPK V RVGRR+TVRIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Subjt:  SYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase3.4e-0532.81Show/hide
Query:  VDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEW
        V L++ TCTCR+F  Y+ PC HA+A      +N        Y  E    +Y     PV  +  W
Subjt:  VDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGGATCTTTGTGTGTTACGGTGGTCTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGGATATTGACATAAGGTATGAAGA
GTTTTTAAGAGAGCTCTATAACCTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAA
ATGACAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCAAAATTGCCGTTATACTTATCAATGATTCCAAAAGTTGTCCATGGTAGTGGCAGTAACTTAGGTAGT
CATAGCCATATACCACCCACGATCTCACAACCTTTTTCACAACCGCCACCATCATTTGCACAGACTGGACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTC
GTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATT
TGTATACTGGTGACGATGCACTTAATTACGAGGAAGAAGAGTATGATGAAGAGGAAGATGAAAACTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAA
GAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGATTATGATGATGACATTGCAGGAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAACATCGGAC
ACATGCCTCTAGCCTATCTTCGAGGTTATCAGAGTACGCAGAAAACCTATTGATGGAAGCCGAGAAGAAGTCTCGAAGGCATAATGTGGAACCGATTGATTTCTACCAAT
ATCAAATAGACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCA
GCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACACAGAATCTGTGATCCTATCATACGTAGAACCGATATATCCTGTTGGCCCTATGTTTGA
GTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTC
AAGTACAACAAGTTCACAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGGATCTTTGTGTGTTACGGTGGTCTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGGATATTGACATAAGGTATGAAGA
GTTTTTAAGAGAGCTCTATAACCTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAA
ATGACAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCAAAATTGCCGTTATACTTATCAATGATTCCAAAAGTTGTCCATGGTAGTGGCAGTAACTTAGGTAGT
CATAGCCATATACCACCCACGATCTCACAACCTTTTTCACAACCGCCACCATCATTTGCACAGACTGGACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTC
GTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATT
TGTATACTGGTGACGATGCACTTAATTACGAGGAAGAAGAGTATGATGAAGAGGAAGATGAAAACTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAA
GAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGATTATGATGATGACATTGCAGGAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAACATCGGAC
ACATGCCTCTAGCCTATCTTCGAGGTTATCAGAGTACGCAGAAAACCTATTGATGGAAGCCGAGAAGAAGTCTCGAAGGCATAATGTGGAACCGATTGATTTCTACCAAT
ATCAAATAGACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCA
GCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACACAGAATCTGTGATCCTATCATACGTAGAACCGATATATCCTGTTGGCCCTATGTTTGA
GTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTC
AAGTACAACAAGTTCACAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA
Protein sequenceShow/hide protein sequence
MPRIFVCYGGLWKENERDYEGGYLAGLDVDIDIRYEEFLRELYNLSDINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIPKVVHGSGSNLGS
HSHIPPTISQPFSQPPPSFAQTGPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDALNYEEEEYDEEEDENWEYNEEDEELDESYE
EESEADEFEEVDDYDDDIAGDGVEADGGTDGGNEHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAA
ARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT