; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024023 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024023
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionupstream activation factor subunit spp27-like
Genome locationscaffold13:7056415..7058928
RNA-Seq ExpressionSpg024023
SyntenySpg024023
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593744.1 hypothetical protein SDJN03_13220, partial [Cucurbita argyrosperma subsp. sororia]5.8e-5376.1Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KG++KAS AA S K SEAG KKE N S GI KSVQVSPALA FLGMSE+SR+EAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LNNLQ              P +KRQINCDEKLKAIFDGRE VGFLEIGKLLSPHFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

KAG6593745.1 hypothetical protein SDJN03_13221, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5276.1Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KG+LKAS AA S K SEAG KKE N S GI KSVQVSPALA FLGMSE+SR EAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LNNLQ              P +KRQINCDEKLKAIFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

XP_023000110.1 upstream activation factor subunit spp27-like [Cucurbita maxima]5.8e-5376.73Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KG+LKAS AA S K SEAG KKE N S GIFKSVQVSPALA FLGMSE+SRSEAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQ              P +KRQINCDEKLKAIFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

XP_023000111.1 upstream activation factor subunit spp27-like [Cucurbita maxima]1.3e-5276.1Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KG+LKAS AA + K SEAG KKE N S GIFKSVQVSPALA FLGMSE+SRSEAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQ              P +KRQINCDEKLKAIFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

XP_023514456.1 upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]2.6e-5377.36Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KGKLKAS AA S K SEAG KKEVN S GIFKSVQVSPALA FLGMSE+SR EAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LNNLQ              P +KRQINCDEKLKAIFDGRE VG LEIGKLLS HFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

TrEMBL top hitse value%identityAlignment
A0A0A0KCY9 SWIB domain-containing protein2.3e-3962.66Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGLSNGT  F+GCRTL +SLKST+QAYSS   +S K  LK S+AA SG+ S+   KK  N S G+ K+ +VSP LA FLG SE +R+EAVKQIW YIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKS
        LNNLQ              PTDKRQI CD KLKAIF GREKVG LEI K LS HFVKS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKS

A0A1S3CBA0 protein TRI1-like1.6e-4365.19Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGLSNGT  FRGC+TL +SLK T+QAYSS  A+S K KLK  SAA SG+ S+A  K++ N S GI KS++VSP LA FLG SE SR++A+KQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKS
        LNNLQ               TDKRQINCD KLKAIF GREKVG LEI K LSPHFVKS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKS

A0A5D3DMJ2 Protein TRI1-like1.6e-4365.19Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGLSNGT  FRGC+TL +SLK T+QAYSS  A+S K KLK  SAA SG+ S+A  K++ N S GI KS++VSP LA FLG SE SR++A+KQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKS
        LNNLQ               TDKRQINCD KLKAIF GREKVG LEI K LSPHFVKS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKS

A0A6J1KEZ2 upstream activation factor subunit spp27-like6.3e-5376.1Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KG+LKAS AA + K SEAG KKE N S GIFKSVQVSPALA FLGMSE+SRSEAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQ              P +KRQINCDEKLKAIFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

A0A6J1KHF5 upstream activation factor subunit spp27-like2.8e-5376.73Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        MASGL+NGT LFRGCRTL +SLKST+QAYSSAAA+S KG+LKAS AA S K SEAG KKE N S GIFKSVQVSPALA FLGMSE+SRSEAVKQIWSYIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQ              P +KRQINCDEKLKAIFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.3e-0734.29Show/hide
Query:  SHKGKLKASSAAGSGKISEAGAKKEVNH---SSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKL
        + +GK  A       +  E G K++ N    ++ + K +++SP LA FLG+ + SR + VK++W YIK ++LQ              P DKR I CD+KL
Subjt:  SHKGKLKASSAAGSGKISEAGAKKEVNH---SSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKL

Query:  KAIFD
        K++F+
Subjt:  KAIFD

Q05024 Protein TRI15.0e-0735.85Show/hide
Query:  SEAGAKKEVNHS----SGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIG
        S++  KK+ N S    S   + V +S  L  FLG  E  R++ VK IW YIK             E+ L+ P D+R+I CDEK++ IF   +K+    + 
Subjt:  SEAGAKKEVNHS----SGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIG

Query:  KLLSPH
        KLL+ H
Subjt:  KLLSPH

Q08747 Upstream activation factor subunit UAF302.9e-0734Show/hide
Query:  KKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVK
        K  V+ S    + V +S +LAS LG  E +R+E V+++W+YIK +NLQ              P +K++I CDEKL+ I    +     E+ K+L+ H  +
Subjt:  KKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVK

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein3.4e-1943.55Show/hide
Query:  ISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKA
        +S    ++A + AG GK              GIFK+  VS  LASF G  E +R  A+K++W Y+KL+NLQ              P +K++I+CD+KLK 
Subjt:  ISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKA

Query:  IFDGREKVGFLEIGKLLSPHFVKS
        IFDG++KVG  EI KLLSPHF KS
Subjt:  IFDGREKVGFLEIGKLLSPHFVKS

AT2G14880.1 SWIB/MDM2 domain superfamily protein1.8e-1538.31Show/hide
Query:  LSNGT-SLFRGCRTLFESLKSTSQAYSSAAAISH-KGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLN
        +S+GT S F   +T   S ++ S   SS    SH   KL+   A  S   S            GI K   VSP +   + + E +R++A+K+IW+YIK  
Subjt:  LSNGT-SLFRGCRTLFESLKSTSQAYSSAAAISH-KGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLN

Query:  NLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFV
                   E+ L+ P +KR+I CDEKLK IF+GR++VGFLEI KL+ PHF+
Subjt:  NLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFV

AT2G35605.1 SWIB/MDM2 domain superfamily protein6.3e-2149.54Show/hide
Query:  KISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKL
        K + +   K     +GI K V VS  LA+F+G +E SR+ AVK+IW YIKLNNLQ              P +KR+I CDE+LK IF G++ VGFLEI KL
Subjt:  KISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKL

Query:  LSPHFVKSS
        LS HF KS+
Subjt:  LSPHFVKSS

AT3G03590.1 SWIB/MDM2 domain superfamily protein7.2e-2546.67Show/hide
Query:  LFRGCRTLF-ESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRL
        +FRG R+L   + ++TS   S+ +      K KA +       S++ AKK    S+GIFK   VSP LA FLG  ETSR++A+K IW+YIK ++LQ    
Subjt:  LFRGCRTLF-ESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRL

Query:  PNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS
                  P DKR+I CDE LK IF+G++KVGFLEI KLLSPHFVK++
Subjt:  PNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS

AT4G34290.1 SWIB/MDM2 domain superfamily protein3.9e-1535.26Show/hide
Query:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK
        ++SG+ + T L      L  S+ S S    S    ++   ++A ++A +   S+     +     GI K   VS A+   +G+ E  R++A+K+IW+YIK
Subjt:  MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIK

Query:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFV
                     E+ L+ P +KR I CDEKLK IF+G+E+VGFLEI KL+ PHF+
Subjt:  LNNLQPVRLPNFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGGTCTTAGCAATGGCACCAGCTTATTCAGAGGTTGCAGAACCCTCTTCGAATCACTAAAATCCACCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCA
CAAGGGGAAGCTAAAAGCTTCAAGTGCCGCCGGTTCCGGCAAAATATCGGAAGCCGGAGCAAAGAAAGAGGTGAATCATTCGTCGGGGATTTTTAAGTCCGTCCAAGTTT
CTCCGGCTCTCGCTAGCTTCCTTGGCATGTCCGAGACTTCGCGTTCTGAAGCTGTCAAGCAAATATGGTCCTATATCAAGCTGAATAACCTCCAGCCTGTTCGTTTGCCT
AATTTTGTTGAGAATGCCTTGAAAACCCCAACTGATAAGAGGCAGATCAATTGTGATGAAAAGCTGAAGGCTATATTTGATGGAAGAGAGAAAGTGGGATTCTTAGAGAT
TGGAAAATTGCTGTCCCCTCATTTTGTGAAGTCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAGGTCTTAGCAATGGCACCAGCTTATTCAGAGGTTGCAGAACCCTCTTCGAATCACTAAAATCCACCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCA
CAAGGGGAAGCTAAAAGCTTCAAGTGCCGCCGGTTCCGGCAAAATATCGGAAGCCGGAGCAAAGAAAGAGGTGAATCATTCGTCGGGGATTTTTAAGTCCGTCCAAGTTT
CTCCGGCTCTCGCTAGCTTCCTTGGCATGTCCGAGACTTCGCGTTCTGAAGCTGTCAAGCAAATATGGTCCTATATCAAGCTGAATAACCTCCAGCCTGTTCGTTTGCCT
AATTTTGTTGAGAATGCCTTGAAAACCCCAACTGATAAGAGGCAGATCAATTGTGATGAAAAGCTGAAGGCTATATTTGATGGAAGAGAGAAAGTGGGATTCTTAGAGAT
TGGAAAATTGCTGTCCCCTCATTTTGTGAAGTCTAGTTAA
Protein sequenceShow/hide protein sequence
MASGLSNGTSLFRGCRTLFESLKSTSQAYSSAAAISHKGKLKASSAAGSGKISEAGAKKEVNHSSGIFKSVQVSPALASFLGMSETSRSEAVKQIWSYIKLNNLQPVRLP
NFVENALKTPTDKRQINCDEKLKAIFDGREKVGFLEIGKLLSPHFVKSS