CuGenDBv2

Gene ID	Spg024025
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribosomal RNA adenine dimethylase family protein
Genome location	scaffold13:8392633..8393166
RNA-Seq Expression	Spg024025
Synteny	Spg024025
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574778.1 hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia]

3.7e-72

85.96

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Query:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD
        MAEG A PSLPDLVLSLEQASFMAKQL STSNP HLLQIYNSLHQA+LNLSVFLS  H+PQS    LPLP PSIN+N LSSATSAAFND  +EPMQVGDD
Subjt:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD

Query:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        EDADAE NSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAA+AEERRVHRD+RF ATAKGFDP  ERLRALDLISQFHA
Subjt:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

XP_011656677.1 uncharacterized protein LOC105435764 [Cucumis sativus]

1.2e-70

83.71

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Query:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD
        MA+G APPSL DL+LSL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLS+FLS TH PQSLPLPLPLP PSINE SLSSATSAAF     +PMQVGDD
Subjt:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD

Query:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        +DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF AT KGFDP  ERLRALDLISQFHA
Subjt:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

XP_022156139.1 uncharacterized protein LOC111023095 [Momordica charantia]

2.8e-72

85.31

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Query:  MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDE
        MAEGA PSLPDLVLSLEQASFMAKQLPSTSNP+HLLQIYNSLHQA+ NLS+FLS T FPQS    LPLPRPS+NENSLSSATSAAFNDD +EPMQVGDD 
Subjt:  MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDE

Query:  DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
            E NSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AA+AEERR+HRDDRFGAT+KGFDPR ERLRALDLISQFHA
Subjt:  DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

XP_023548054.1 uncharacterized protein LOC111806806 [Cucurbita pepo subsp. pepo]

3.4e-70

83.52

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Query:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD
        MAEG A PSLPDLVLSLEQASFMAKQL STSNP HLLQIYNSLHQA+LNLSVFLS  H+PQS    LP+P PSIN+N LSSATSAAFND  +EPMQVGDD
Subjt:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD

Query:  E----DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        E    DADAE NSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAA+AEERRVHRD+RF ATAKGFDP  ERLRALDLISQFHA
Subjt:  E----DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

XP_038876419.1 uncharacterized protein LOC120068853 [Benincasa hispida]

1.0e-74

87.01

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Query:  MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDE
        MAEGA PSL DL+LSLEQASFMAKQLPS+SNPTHLLQIYNSLHQA+LNLS+FLS+T F QS    LPLPRPSINENSLSSATSAAFNDD +EPMQVGDD+
Subjt:  MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDE

Query:  DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        DADAEH+SKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVHRD+RF AT KGFDP  ERLRALDLISQFHA
Subjt:  DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBH1 Uncharacterized protein

5.7e-71

83.71

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Query:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD
        MA+G APPSL DL+LSL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLS+FLS TH PQSLPLPLPLP PSINE SLSSATSAAF     +PMQVGDD
Subjt:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD

Query:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        +DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF AT KGFDP  ERLRALDLISQFHA
Subjt:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

A0A1S3CC06 uncharacterized protein LOC103499058

1.9e-66

81.46

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Query:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD
        MAEG APPSL DL+ SL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLS+FLS TH PQS    LPLP PSINE SLSSATSAAF     +PMQVGDD
Subjt:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD

Query:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        +DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF AT KGFDP  ERLRALDLISQFHA
Subjt:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

A0A5D3DLF5 Putative AP2-like ethylene-responsive transcription factor SNZ

1.9e-66

81.46

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Query:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD
        MAEG APPSL DL+ SL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLS+FLS TH PQS    LPLP PSINE SLSSATSAAF     +PMQVGDD
Subjt:  MAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDD

Query:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
        +DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF AT KGFDP  ERLRALDLISQFHA
Subjt:  EDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

A0A6J1DSG3 uncharacterized protein LOC111023095

1.4e-72

85.31

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Query:  MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDE
        MAEGA PSLPDLVLSLEQASFMAKQLPSTSNP+HLLQIYNSLHQA+ NLS+FLS T FPQS    LPLPRPS+NENSLSSATSAAFNDD +EPMQVGDD 
Subjt:  MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDE

Query:  DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
            E NSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AA+AEERR+HRDDRFGAT+KGFDPR ERLRALDLISQFHA
Subjt:  DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

A0A7N2MFF3 Uncharacterized protein

4.1e-45

63.19

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Query:  MAEGA---PPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLP--LPRP-SINENSLSSATSAAFNDDADEPM
        MAE A   P  L +LVL+LEQA+ MAKQLP+T++PTHLLQIY SLHQA  +LS FLS+TH  Q  P PLP  LP P + +ENS+SS T  A  D    PM
Subjt:  MAEGA---PPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLP--LPRP-SINENSLSSATSAAFNDDADEPM

Query:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFH
        Q+ DD+  D E NSKG IE VEEKM+DCFIKNKR KR LSPSAA +AEERR++ DD FG + KGFDP A RLRALDL+ QFH
Subjt:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G01840.1 unknown protein

3.8e-19

43.35

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Query:  DLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDEDAD---AEHN
        +L+ SLEQA+ MA+Q+ +T     LLQI +SL  A   LS FL+      S+P        +  E S SS           EPMQ+G++E  +   AE  
Subjt:  DLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDEDAD---AEHN

Query:  SKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAL---AEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA
            IE VEEKM++CFI+NKR+KR LSPS+A +   A E R  RD  F +     DP A +LRALDLI QFHA
Subjt:  SKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAL---AEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCAGAAGGAGCACCACCTTCATTGCCCGACCTTGTACTCTCGCTAGAGCAAGCATCATTCATGGCGAAGCAGCTTCCTTCTACCTCTAACCCAACCCATCTCCTTCA
AATCTACAATTCTCTCCACCAAGCCAGCCTCAACCTCTCCGTTTTCCTCTCTAGAACTCACTTCCCCCAATCCCTTCCTCTTCCTCTTCCTCTTCCTCGCCCTTCCATCA
ACGAAAATTCCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACGACGCCGACGAGCCGATGCAGGTCGGCGACGACGAAGATGCCGACGCCGAGCACAATTCCAAGGGC
ACGATTGAAATGGTGGAGGAGAAGATGAAGGATTGCTTTATTAAGAACAAGCGGGTCAAGCGTCAACTATCGCCGTCGGCGGCGGCTTTGGCGGAGGAAAGACGAGTGCA
CCGTGATGATCGGTTTGGTGCGACGGCGAAGGGTTTCGATCCTCGTGCTGAGAGATTGCGGGCCTTGGACCTTATTTCCCAGTTTCATGCGTGA

mRNA sequence

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Protein sequence

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MAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSVFLSRTHFPQSLPLPLPLPRPSINENSLSSATSAAFNDDADEPMQVGDDEDADAEHNSKG
TIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGATAKGFDPRAERLRALDLISQFHA

Spg024025 (gene) of Sponge gourd (cylindrica) v1 genome