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Spg024076 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024076
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlutamate--tRNA ligase
Genome locationscaffold13:1009774..1010130
RNA-Seq ExpressionSpg024076
SyntenySpg024076
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]3.3e-3779.83Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSS RPLAIVLALASAV LSPLRS+ET  SSGF +PLVLLGLIIAIKTSS CSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VVLILVLSWQNSVQEFLWR
        ++LIL LSWQ+SVQEFLWR
Subjt:  VVLILVLSWQNSVQEFLWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]1.0e-3880.67Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSSQRPLAI LALASAVVLSPLRS+ET  SSGF +PLVLLGLI+AIKTSSSCSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VVLILVLSWQNSVQEFLWR
        ++LIL LSWQ+SVQEFLWR
Subjt:  VVLILVLSWQNSVQEFLWR

KAF3958642.1 hypothetical protein CMV_016470 [Castanea mollissima]2.7e-3168.33Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R  ET+ SSGF LP+VL GLIIAIKT+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVVLILVLSWQNSVQEFLWR
        LV+L+LVLSWQ SVQEF WR
Subjt:  LVVLILVLSWQNSVQEFLWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4384.75Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILV
        MDSNYG+YTNQ SSQRPLAIVLALASAVVLSPLR +E+R SSGF LPLVLL LIIAIKTSSSCSSMST+R ERDSA LSSDPSWVLKIGSSSWGLAG+L+
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILV

Query:  VLILVLSWQNSVQEFLWR
        +LI  LSWQ+SV+EFLWR
Subjt:  VLILVLSWQNSVQEFLWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]1.4e-3068.33Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R +ET+ SSGF LP+VL GLIIAIKT+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVVLILVLSWQNSVQEFLWR
        LV+L+LVLSWQ SVQEF WR
Subjt:  LVVLILVLSWQNSVQEFLWR

TrEMBL top hitse value%identityAlignment
A0A0A0LEN3 Uncharacterized protein5.0e-3980.67Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSSQRPLAI LALASAVVLSPLRS+ET  SSGF +PLVLLGLI+AIKTSSSCSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VVLILVLSWQNSVQEFLWR
        ++LIL LSWQ+SVQEFLWR
Subjt:  VVLILVLSWQNSVQEFLWR

A0A2N9IBH6 Uncharacterized protein5.0e-3165.83Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPLRS--------FETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT Q SSQR +A+VL+L SA+VLSPL +        +ET+ SSGF LP+VL+GLIIAI+T+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPLRS--------FETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVVLILVLSWQNSVQEFLWR
        LV+L+LVLSWQ SVQEF WR
Subjt:  LVVLILVLSWQNSVQEFLWR

A0A5A7UY99 Putative transmembrane protein1.6e-3779.83Show/hide
Query:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL
        MDSNY +Y NQNSS RPLAIVLALASAV LSPLRS+ET  SSGF +PLVLLGLIIAIKTSS CSS S     RDSA L SD PSWVLKIGSSSWGLAGIL
Subjt:  MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSD-PSWVLKIGSSSWGLAGIL

Query:  VVLILVLSWQNSVQEFLWR
        ++LIL LSWQ+SVQEFLWR
Subjt:  VVLILVLSWQNSVQEFLWR

A0A6N2MX54 Uncharacterized protein3.6e-2970.8Show/hide
Query:  NQNSSQRPLAIVLALASAVVLSPL----RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVVLILV
        +QNSSQR LA+VLALASAVVLSPL    R+ ET+ SSGF LP+VL GL+IAI+T+S  SSMS  RG R S   S DPSWVL+IGSSSWGLAG+LV+L LV
Subjt:  NQNSSQRPLAIVLALASAVVLSPL----RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVVLILV

Query:  LSWQNSVQEFLWR
        LSWQ+SVQEF WR
Subjt:  LSWQNSVQEFLWR

A0A7N2LMQ6 Uncharacterized protein6.6e-3168.33Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R +ET+ SSGF LP+VL GLIIAIKT+SSCSSMS + G R S   S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGI

Query:  LVVLILVLSWQNSVQEFLWR
        LV+L+LVLSWQ SVQEF WR
Subjt:  LVVLILVLSWQNSVQEFLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGA
AACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAG
ATTCTGCAACTCTCTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGGTGTTGATTCTTGTGCTTTCTTGGCAAAAT
TCTGTTCAAGAATTCCTCTGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGA
AACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAG
ATTCTGCAACTCTCTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGGTGTTGATTCTTGTGCTTTCTTGGCAAAAT
TCTGTTCAAGAATTCCTCTGGAGATAG
Protein sequenceShow/hide protein sequence
MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVVLILVLSWQN
SVQEFLWR